Author details

Full Name

Ergin Soysal

Affiliation

The University of Texas Health Science Center at Houston

ORCID

Career Start Year

2008

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
31562516	Cohort selection for clinical trials: n2c2 2018 shared task track 1.	J Am Med Inform Assoc	2019
31562516	Cohort selection for clinical trials: n2c2 2018 shared task track 1.	J Am Med Inform Assoc	2019
31815074	Development of a Natural Language Processing Tool to Extract Radiation Treatment Sites.	Cureus	2019
31438083	Developing Customizable Cancer Information Extraction Modules for Pathology Reports Using CLAMP.	Stud Health Technol Inform	2019
31815074	Development of a Natural Language Processing Tool to Extract Radiation Treatment Sites.	Cureus	2019
31438083	Developing Customizable Cancer Information Extraction Modules for Pathology Reports Using CLAMP.	Stud Health Technol Inform	2019
29186491	CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.	J Am Med Inform Assoc	2018
29186491	CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.	J Am Med Inform Assoc	2018
29346583	DataMed - an open source discovery index for finding biomedical datasets.	J Am Med Inform Assoc	2018
29346583	DataMed - an open source discovery index for finding biomedical datasets.	J Am Med Inform Assoc	2018
27539197	A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).	J Am Med Inform Assoc	2017
28815141	Identifying Metastases-related Information from Pathology Reports of Lung Cancer Patients.	AMIA Jt Summits Transl Sci Proc	2017
28546571	Finding useful data across multiple biomedical data repositories using DataMed.	Nat Genet	2017
28296354	CATTLE (CAncer treatment treasury with linked evidence): An integrated knowledge base for personalized oncology research and practice.	CPT Pharmacometrics Syst Pharmacol	2017
27539197	A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).	J Am Med Inform Assoc	2017
28296354	CATTLE (CAncer treatment treasury with linked evidence): An integrated knowledge base for personalized oncology research and practice.	CPT Pharmacometrics Syst Pharmacol	2017
28546571	Finding useful data across multiple biomedical data repositories using DataMed.	Nat Genet	2017
28815141	Identifying Metastases-related Information from Pathology Reports of Lung Cancer Patients.	AMIA Jt Summits Transl Sci Proc	2017
27585838	Leveraging syntactic and semantic graph kernels to extract pharmacokinetic drug drug interactions from biomedical literature.	BMC Syst Biol	2016
27585838	Leveraging syntactic and semantic graph kernels to extract pharmacokinetic drug drug interactions from biomedical literature.	BMC Syst Biol	2016
26100720	A weighted and integrated drug-target interactome: drug repurposing for schizophrenia as a use case.	BMC Syst Biol	2015
26306271	Integrating Multiple On-line Knowledge Bases for Disease-Lab Test Relation Extraction.	AMIA Jt Summits Transl Sci Proc	2015
26100720	A weighted and integrated drug-target interactome: drug repurposing for schizophrenia as a use case.	BMC Syst Biol	2015
26306271	Integrating Multiple On-line Knowledge Bases for Disease-Lab Test Relation Extraction.	AMIA Jt Summits Transl Sci Proc	2015
20970122	Design and evaluation of an ontology based information extraction system for radiological reports.	Comput Biol Med	2010
20970122	Design and evaluation of an ontology based information extraction system for radiological reports.	Comput Biol Med	2010
18520835	Basal cell carcinoma of the eyelids and periorbital region in a Turkish population.	Ophthalmic Plast Reconstr Surg	2008
18520835	Basal cell carcinoma of the eyelids and periorbital region in a Turkish population.	Ophthalmic Plast Reconstr Surg	2008

1 - 28 of 28

Hongfang Liu

Mayo Clinic

Career Start Year 2018

Number of shared co-authors 3

Andrew Wen

Mayo Clinic

Career Start Year 2017

Number of shared co-authors 6

Yanshan Wang

Mayo Clinic

Career Start Year 2016

Number of shared co-authors 13

Sijia Liu

Mayo Clinic, University at Buffalo - North Campus

Career Start Year 2016

Number of shared co-authors 12

Lucy Lu Wang

University of Washington, USA Allen Institute for AI

Career Start Year 2015

Number of shared co-authors 0

Jianlin Shi

University of Utah

Career Start Year 2015

Number of shared co-authors 0

Hua Xu

The University of Texas Health Science Center at Houston

Career Start Year 2015

Number of shared co-authors 9

Majid Rastegar-Mojarad

Mayo Clinic

Career Start Year 2013

Number of shared co-authors 4

Saeed Mehrabi

Mayo Clinic

Career Start Year 2013

Number of shared co-authors 3

Yifan Peng

National Center for Biotechnology Information, National Institutes of Health

Career Start Year 2013

Number of shared co-authors 1

Dingcheng Li

University of Minnesota

Career Start Year 2012

Number of shared co-authors 3

Feichen Shen

Shanghai Polytechnic University

Career Start Year 2012

Number of shared co-authors 8

Stephen Wu

The University of Texas Health Science Center at Houston

Career Start Year 2011

Number of shared co-authors 16

Kirk Roberts

Georgia Institute of Technology, National Library of Medicine, University of Texas Health Science Center at Houston, University of Texas at Dallas

Career Start Year 2011

Number of shared co-authors 15

Siddhartha R Jonnalagadda

Department of Preventative Medicine Northwestern University Chicago IL.

Career Start Year 2010

Number of shared co-authors 3

Feifan Liu

College of Ethnic Medicine, Yunnan University of Chinese Medicine

Career Start Year 2010

Number of shared co-authors 1

Kavishwar B Wagholikar

Massachusetts General Hospital

Career Start Year 2009

Number of shared co-authors 2

Yiqing Zhao

Northwestern University

Career Start Year 2008

Number of shared co-authors 4

Robert Leaman

National Institutes of Health

Career Start Year 2008

Number of shared co-authors 2

Bridget T McInnes

Virginia Commonwealth University

Career Start Year 2007

Number of shared co-authors 4

Jaewoo Kang

Korea University

Career Start Year 2006

Number of shared co-authors 0

Karin Verspoor

National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre

Career Start Year 2005

Number of shared co-authors 3

Zhiyong Lu

National Center for Biotechnology Information, National Institutes of Health.

Career Start Year 2005

Number of shared co-authors 3

Guergana Savova

Boston Children's Hospital, Harvard Medical School.

Career Start Year 2003

Number of shared co-authors 8

St??phane M Meystre

OnePlanet Research Center and imec

Career Start Year 2003

Number of shared co-authors 0

Komandur Elayavilli Ravikumar

Mayo Clinic

Career Start Year 2003

Number of shared co-authors 3

Guoqian Jiang

Mayo Clinic Rochester Minnesota USA.

Career Start Year 2002

Number of shared co-authors 11

Javed Mostafa

University of North Carolina at Chapel Hill

Career Start Year 2001

Number of shared co-authors 1

Carol Friedman

Columbia University

Career Start Year 1990

Number of shared co-authors 8

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Career Start Year 1985

Number of shared co-authors 11

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