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Author Details

??zlem Uzuner
George Mason University
2006
76
26
PMIDPaper TitleJournal TitlePublished Year
36795066The 2022 n2c2/UW shared task on extracting social determinants of health.J Am Med Inform Assoc2023
37550244LeafAI: query generator for clinical cohort discovery rivaling a human programmer.J Am Med Inform Assoc2023
37061012Progress Note Understanding - Assessment and Plan Reasoning: Overview of the 2022 N2C2 Track 3 shared task.J Biomed Inform2023
37466054Advancements in extracting social determinants of health information from narrative text.J Am Med Inform Assoc2023
37356640Overview of the 2022 n2c2 shared task on contextualized medication event extraction in clinical notes.J Biomed Inform2023
36754129Extracting medication changes in clinical narratives using pre-trained language models.J Biomed Inform2023
34676376A Context-Enhanced De-identification System.ACM Trans Comput Healthc2022
35854739Extracting Radiological Findings With Normalized Anatomical Information Using a Span-Based BERT Relation Extraction Model.AMIA Jt Summits Transl Sci Proc2022
35985622Call for papers: Special issue on clinical natural language processing for secondary use applications.J Biomed Inform2022
35953524The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria.Sci Data2022
35923088A scoping review of publicly available language tasks in clinical natural language processing.J Am Med Inform Assoc2022
36050787Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers.Database (Oxford)2022
34401908Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records.J Am Med Inform Assoc2021
33502329Family History Extraction From Synthetic Clinical Narratives Using Natural Language Processing: Overview and Evaluation of a Challenge Data Set and Solutions for the 2019 National NLP Clinical Challenges (n2c2)/Open Health Natural Language Processing (OHNLP) Competition.JMIR Med Inform2021
34586386Transferability of neural network clinical deidentification systems.J Am Med Inform Assoc2021
31630961Emerging clinical applications of text analytics.Int J Med Inform2020
31841150Advancing the state of the art in automatic extraction of adverse drug events from narratives.J Am Med Inform Assoc2020
33245291The 2019 n2c2/OHNLP Track on Clinical Semantic Textual Similarity: Overview.JMIR Med Inform2020
32890727Adverse drug event detection using reason assignments in FDA drug labels.J Biomed Inform2020
32968800The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records.J Am Med Inform Assoc2020
32477654Normalizing Adverse Events using Recurrent Neural Networks with Attention.AMIA Jt Summits Transl Sci Proc2020
32477653Extraction and Analysis of Clinically Important Follow-up Recommendations in a Large Radiology Dataset.AMIA Jt Summits Transl Sci Proc2020
315846552018 n2c2 shared task on adverse drug events and medication extraction in electronic health records.J Am Med Inform Assoc2020
31562516Cohort selection for clinical trials: n2c2 2018 shared task track 1.J Am Med Inform Assoc2019
31801516Editorial: The second international workshop on health natural language processing (HealthNLP 2019).BMC Med Inform Decis Mak2019
31613362New approaches to cohort selection.J Am Med Inform Assoc2019
31437951An Exploratory Study on Pseudo-Data Generation in Prescription and Adverse Drug Reaction Extraction.Stud Health Technol Inform2019
31437917An Empirical Test of GRUs and Deep Contextualized Word Representations on De-Identification.Stud Health Technol Inform2019
29025149Segment convolutional neural networks (Seg-CNNs) for classifying relations in clinical notes.J Am Med Inform Assoc2018
30157522Advancing the State of the Art in Clinical Natural Language Processing through Shared Tasks.Yearb Med Inform2018
30213376Corrigendum to "Symptom severity prediction from neuropsychiatric clinical records: Overview of 2016 CEGS N-GRID shared tasks Track 2" [J Biomed Inform. 2017 Nov;75S:S62-S70].J Biomed Inform2018
30815199FABLE: A Semi-Supervised Prescription Information Extraction System.AMIA Annu Symp Proc2018
26851224Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations.Brief Bioinform2017
28455151Symptom severity prediction from neuropsychiatric clinical records: Overview of 2016 CEGS N-GRID shared tasks Track 2.J Biomed Inform2017
28472242Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations.Brief Bioinform2017
29042245A natural language processing challenge for clinical records: Research Domains Criteria (RDoC) for psychiatry.J Biomed Inform2017
28614702De-identification of psychiatric intake records: Overview of 2016 CEGS N-GRID shared tasks Track 1.J Biomed Inform2017
28663072Automatic prediction of coronary artery disease from clinical narratives.J Biomed Inform2017
28684255Prescription extraction using CRFs and word embeddings.J Biomed Inform2017
28040687De-identification of patient notes with recurrent neural networks.J Am Med Inform Assoc2017
26004790Annotating risk factors for heart disease in clinical narratives for diabetic patients.J Biomed Inform2015
26515500Practical applications for natural language processing in clinical research: The 2014 i2b2/UTHealth shared tasks.J Biomed Inform2015
26433122Creation of a new longitudinal corpus of clinical narratives.J Biomed Inform2015
26319540Annotating longitudinal clinical narratives for de-identification: The 2014 i2b2/UTHealth corpus.J Biomed Inform2015
26210362Identifying risk factors for heart disease over time: Overview of 2014 i2b2/UTHealth shared task Track 2.J Biomed Inform2015
26210361Ease of adoption of clinical natural language processing software: An evaluation of five systems.J Biomed Inform2015
26225918Automated systems for the de-identification of longitudinal clinical narratives: Overview of 2014 i2b2/UTHealth shared task Track 1.J Biomed Inform2015
26241355A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases.J Biomed Inform2015
25868462Normalization of relative and incomplete temporal expressions in clinical narratives.J Am Med Inform Assoc2015
25862765Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text.J Am Med Inform Assoc2015
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Collaborators

Peter Szolovits
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Yuan Luo
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Co-authored papers 8
Sam Henry
George Mason University
Co-authored papers 7
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Brett R South
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Feichen Shen
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Matthew M Churpek
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Scott L DuVall
University of Utah
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Hua Xu
Yale University
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Sunyang Fu
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Bridget T McInnes
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Lynette Hirschman
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Dmitriy Dligach
Loyola University
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Isaac S Kohane
Harvard Medical School
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Franck Dernoncourt
Massachusetts Institute of Technology
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Guergana Savova
Boston Children's Hospital, Harvard Medical School.
Co-authored papers 1
Leslie A Lenert
Medical University of South Carolina
Co-authored papers 1
John F Hurdle
University of Utah
Co-authored papers 1
Anupama E Gururaj
National Institute of Allergy and Infectious Disease, National Institutes of Health
Co-authored papers 1
Samuel Bayer
Psychoanalytic University Berlin
Co-authored papers 1
Ergin Soysal
The University of Texas Health Science Center at Houston
Co-authored papers 1
Raul Rodriguez-Esteban
Co-authored papers 1
Wendy W Chapman
University of Melbourne
Co-authored papers 1
Graciela Gonzalez-Hernandez
Cedars-Sinai Medical Center
Co-authored papers 1
Release 1.2