Author details

Full Name

John M Logsdon

Affiliation

University of Iowa

ORCID

Career Start Year

1971

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36625177	Single-molecule Sequencing of an Animal Mitochondrial Genome Reveals Chloroplast-like Architecture and Repeat-mediated Recombination.	Mol Biol Evol	2023
33885820	Asexuality Associated with Marked Genomic Expansion of Tandemly Repeated rRNA and Histone Genes.	Mol Biol Evol	2021
32304112	Male phenotypes in a female framework: Evidence for degeneration in sperm produced by male snails from asexual lineages.	J Evol Biol	2020
31109677	Sex loss in insects: causes of asexuality and consequences for genomes.	Curr Opin Insect Sci	2019
31553440	Genome of the Parasitoid Wasp Diachasma alloeum, an Emerging Model for Ecological Speciation and Transitions to Asexual Reproduction.	Genome Biol Evol	2019
31337355	The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata.	BMC Genomics	2019
29520921	Radical amino acid mutations persist longer in the absence of sex.	Evolution	2018
28992199	Retention of Core Meiotic Genes Across Diverse Hymenoptera.	J Hered	2017
28429458	Genomic evidence for population-specific responses to co-evolving parasites in a New Zealand freshwater snail.	Mol Ecol	2017
24336924	Meiosis gene inventory of four ciliates reveals the prevalence of a synaptonemal complex-independent crossover pathway.	Mol Biol Evol	2014
23280235	Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum).	Mol Ecol Resour	2013
24062528	A mutation in the FHA domain of Coprinus cinereus Nbs1 Leads to Spo11-independent meiotic recombination and chromosome segregation.	G3 (Bethesda)	2013
24062444	Asexual Daphnia genomes expose something old, new, borrowed, and blue.	Proc Natl Acad Sci U S A	2013
23782598	Comparative transcriptome analysis of obligately asexual and cyclically sexual rotifers reveals genes with putative functions in sexual reproduction, dormancy, and asexual egg production.	BMC Genomics	2013
23487324	Inventory and phylogenetic analysis of meiotic genes in monogonont rotifers.	J Hered	2013
21475173	NASA: what now?	Nature	2011
21695260	Phylogeny of parasitic parabasalia and free-living relatives inferred from conventional markers vs. Rpb1, a single-copy gene.	PLoS One	2011
20075255	Functional and evolutionary insights from the genomes of three parasitoid Nasonia species.	Science	2010
21172628	Eukaryotic evolution: the importance of being archaebacterial.	Curr Biol	2010
20167026	Inventory and phylogenomic distribution of meiotic genes in Nasonia vitripennis and among diverse arthropods.	Insect Mol Biol	2010
20421319	Meeting for sex in Iowa.	J Hered	2010
19995828	Accelerated mutation accumulation in asexual lineages of a freshwater snail.	Mol Biol Evol	2010
19282047	Signs of sex: what we know and how we know it.	Trends Ecol Evol	2009
19383157	Meiosis genes in Daphnia pulex and the role of parthenogenesis in genome evolution.	BMC Evol Biol	2009
18403701	Retrospective. Arthur C. Clarke (1917-2008).	Science	2008
18757540	Molecular phylogeny of the salmonellae: relationships among Salmonella species and subspecies determined from four housekeeping genes and evidence of lateral gene transfer events.	J Bacteriol	2008
18809720	Consensus nomenclature for the human ArfGAP domain-containing proteins.	J Cell Biol	2008
18478537	Using a meiosis detection toolkit to investigate ancient asexual "scandals" and the evolution of sex.	Bioessays	2008
18288187	A photosynthetic alveolate closely related to apicomplexan parasites.	Nature	2008
18211841	Evolutionary genetics: sex happens in Giardia.	Curr Biol	2008
18205932	Broadly sampled multigene trees of eukaryotes.	BMC Evol Biol	2008
18375124	Do Salmonella carry spare tyres?	Trends Microbiol	2008
17218520	Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis.	Science	2007
18663385	An expanded inventory of conserved meiotic genes provides evidence for sex in Trichomonas vaginalis.	PLoS One	2007
17921483	Protist homologs of the meiotic Spo11 gene and topoisomerase VI reveal an evolutionary history of gene duplication and lineage-specific loss.	Mol Biol Evol	2007
17298675	A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution.	BMC Genomics	2007
17159231	Adaptation of a diverse simian immunodeficiency virus population to a new host is revealed through a systematic approach to identify amino acid sites under selection.	Mol Biol Evol	2007
16549011	Evolution of the uniquely adaptable lentiviral envelope in a natural reservoir host.	Retrovirology	2006
15693998	Functional evolution of ADAMTS genes: evidence from analyses of phylogeny and gene organization.	BMC Evol Biol	2005
16201015	SIVsm quasispecies adaptation to a new simian host.	PLoS Pathog	2005
16286005	Identification of two proteins required for conjunction and regular segregation of achiasmate homologs in Drosophila male meiosis.	Cell	2005
15926685	An empirical study of the evolution of virulence under both horizontal and vertical transmission.	Evolution	2005
15668177	A phylogenomic inventory of meiotic genes; evidence for sex in Giardia and an early eukaryotic origin of meiosis.	Curr Biol	2005
14740658	The commercial development of space: is an international regulatory framework needed?	Acta Astronaut	2004
15576487	Functional genomic analysis of the ADP-ribosylation factor family of GTPases: phylogeny among diverse eukaryotes and function in C. elegans.	FASEB J	2004
15277668	Worm genomes hold the smoking guns of intron gain.	Proc Natl Acad Sci U S A	2004
12683971	Much ado about bacteria-to-vertebrate lateral gene transfer.	Trends Genet	2003
14579370	Expression and phylogenetic analyses of three zebrafish FoxI class genes.	Dev Dyn	2003
12032239	Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang.	Mol Biol Evol	2002
11959921	Genetic complementation in apicomplexan parasites.	Proc Natl Acad Sci U S A	2002

1 - 50 of 78

Cai Li

Sun Yat-sen University

Career Start Year 2010

Number of shared co-authors 16

Magdalena Zarowiecki

European Bioinformatics Institute

Career Start Year 2007

Number of shared co-authors 2

Francesc L??pez-Gir??ldez

Yale Center for Genomic Analysis

Career Start Year 2005

Number of shared co-authors 3

Jennifer Hume

Baylor College of Medicine

Career Start Year 2004

Number of shared co-authors 63

Toni Gabald??n

Catalan Institution for Research and Advanced Studies

Career Start Year 2003

Number of shared co-authors 17

Richard Cordaux

Universite de Poitiers, UMR CNRS 7267

Career Start Year 2001

Number of shared co-authors 1

Daniel J Richter

Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra)

Career Start Year 2001

Number of shared co-authors 6

Jun Yu

Beijing Institute of Genomics, Chinese Academy of Sciences

Career Start Year 2001

Number of shared co-authors 13

Aoife McLysaght

Smurfit Institute of Genetics, Trinity College Dublin

Career Start Year 2000

Number of shared co-authors 6

Robert Friedman

University of South Carolina

Career Start Year 2000

Number of shared co-authors 1

Neil Hall

Earlham Institute

Career Start Year 2000

Number of shared co-authors 13

Karen Moore

University of Exeter

Career Start Year 2000

Number of shared co-authors 1

Chinnappa D Kodira

GE Global Research Center

Career Start Year 1999

Number of shared co-authors 26

C Titus Brown

University of California davis

Career Start Year 1999

Number of shared co-authors 26

Berend Snel

Utrecht University

Career Start Year 1998

Number of shared co-authors 2

Harmit S Malik

Fred Hutchinson Cancer Center

Career Start Year 1997

Number of shared co-authors 0

David A Liberles

Temple University

Career Start Year 1996

Number of shared co-authors 6

Aaron L Halpern

Illumina Inc.

Career Start Year 1995

Number of shared co-authors 33

Guojie Zhang

University of Copenhagen, Universitetsparken 15

Career Start Year 1995

Number of shared co-authors 25

Sandra W Clifton

Garvan Institute of Medical Research

Career Start Year 1994

Number of shared co-authors 34

Martin J Lercher

Institute for Computer Science, Heinrich Heine University

Career Start Year 1994

Number of shared co-authors 5

Peter Arensburger

California State Polytechnic University

Career Start Year 1993

Number of shared co-authors 74

Derek J Taylor

Case Western Reserve University

Career Start Year 1993

Number of shared co-authors 1

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 1

Arcady Mushegian

National Science Foundation

Career Start Year 1991

Number of shared co-authors 26

Giddy Landan

Institute of General Microbiology, Kiel University

Career Start Year 1990

Number of shared co-authors 54

Bruce W Birren

Broad Institute of MIT and Harvard

Career Start Year 1983

Number of shared co-authors 38

Diethard Tautz

Max Planck Institute for Evolutionary Biology

Career Start Year 1983

Number of shared co-authors 55

John M Hancock

the University of Texas Health Science Center at Houston

Career Start Year 1982

Number of shared co-authors 4

Gregory A Buck

Virginia Commonwealth University.

Career Start Year 1978

Number of shared co-authors 1

row(s) 1 - 30 of 30

Andrew M Schurko

Hendrix College

Co-authored papers 8

John H Werren

University of Rochester

Co-authored papers 2

Daniel J Mazur

Feinberg School of Medicine, Northwestern University

Co-authored papers 2

Hugh M Robertson

University of Illinois at Champaign-Urbana

Co-authored papers 2

Jane M Carlton

Center for Genomics and Systems Biology

Co-authored papers 2

Miriam E Zolan

Indiana University

Co-authored papers 2

Terence D Murphy

National Center for Biotechnology Information, National Institutes of Health

Co-authored papers 1

Shalini N Jhangiani

Baylor College of Medicine

Co-authored papers 1

Lora R Lewis

Baylor College of Medicine

Co-authored papers 1

Timothy B Sackton

Harvard University

Co-authored papers 1

Thomas Schmitt

University of Wurzburg

Co-authored papers 1

Eveline C Verhulst

Wageningen University

Co-authored papers 1

Erich Bornberg-Bauer

Institute for Evolution and Biodiversity, University of Munster

Co-authored papers 1

Alistair C Darby

Institute of Infection, University of Liverpool

Co-authored papers 1

Diego Miranda-Saavedra

Co-authored papers 1

Ian T Paulsen

Macquarie University

Co-authored papers 1

Oliver Niehuis

Institute of Biology I (Zoology), Albert Ludwig University Freiburg

Co-authored papers 1

Stefan Albert

University of Wurzburg

Co-authored papers 1

Stephen Richards

Co-authored papers 1

Michael E Clark

University of Rochester.

Co-authored papers 1

Dan Graur

University of Houston

Co-authored papers 1

Jacqueline A Lopez

University of Notre Dame

Co-authored papers 1

Susanne Neupert

Institute of Biology, University of Kassel

Co-authored papers 1

J??rgen Gadau

Arizona State University

Co-authored papers 1

Claude Desplan

New York University

Co-authored papers 1

Cornelis J P Grimmelikhuijzen

University of Copenhagen, Universitetsparken 15

Co-authored papers 1

Evgenia V Kriventseva

University of Geneva Medical School

Co-authored papers 1

Kimberly K O Walden

University of Illinois at Champaign-Urbana

Co-authored papers 1

Erwin G Van Meir

Heersink School of Medicine, University of Alabama at Birmingham

Co-authored papers 1

Lesley S Chaboub

Center for Neuroregeneration, Houston Methodist Research Institute

Co-authored papers 1

1 - 30

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