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Author Details

Itzhak Mizrahi
2003
75
31
PMIDPaper TitleJournal TitlePublished Year
37223726Phylogenetic diversity of core rumen microbiota as described by cryo-ET.Microlife2023
36221007Asgard ESCRT-III and VPS4 reveal conserved chromatin binding properties of the ESCRT machinery.ISME Journal2023
37149522Carbohydrate Depolymerization by Intricate Cellulosomal Systems.2023
36796334What do you most want to understand about how collective features emerge in microbial communities?Cell Syst2023
34941382Concepts and Consequences of a Core Gut Microbiota for Animal Growth and Development.Annual Review of Animal Biosciences2022
35974086Metaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits.ISME Journal2022
36324306The origin and distribution of the main oxygen sensing mechanism across metazoans.Frontiers in Physiology2022
35725490Mapping the deformability of natural and designed cellulosomes in solution.Biotechnology for Biofuels and Bioproducts2022
34862502GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.Nat Methods2022
34980911Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities.Nat Biotechnol2022
34903850Mammalian gut metabolomes mirror microbiome composition and host phylogeny.ISME Journal2022
34887549Protozoa populations are ecosystem engineers that shape prokaryotic community structure and function of the rumen microbial ecosystem.ISME Journal2022
33169034Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data.Nat Biotechnol2021
34172093SCAPP: an algorithm for improved plasmid assembly in metagenomes.Microbiome2021
33528098A method to the madness: Disentangling the individual forces that shape the rumen microbiome.EMBO Reports2021
33981031The rumen microbiome: balancing food security and environmental impacts.Nature Reviews Microbiology2021
32561815Antibiotic effect and microbiome persistence vary along the European seabass gut.Scientific Reports2020
32312972Stochasticity constrained by deterministic effects of diet and age drive rumen microbiome assembly dynamics.Nature Communications2020
32188849Context-dependent dynamics lead to the assembly of functionally distinct microbial communities.Nature Communications2020
31602783Unravelling plasmidome distribution and interaction with its hosting microbiome.Environ Microbiol2020
32639625Rapid adaptation for fibre degradation by changes in plasmid stoichiometry within Lactobacillus plantarum at the synthetic community level.Microbial Biotechnology2020
31548685Core gut microbial communities are maintained by beneficial interactions and strain variability in fish.Nature Microbiology2019
30517696Segregational Drift and the Interplay between Plasmid Copy Number and Evolvability.Mol Biol Evol2019
31182859FEAST: fast expectation-maximization for microbial source tracking.Nat Methods2019
31281883A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions.Sci Adv2019
30814504Man-made microbial resistances in built environments.Nature Communications2019
30863423Transcriptome Analysis Reveals Common and Differential Response to Low Temperature Exposure Between Tolerant and Sensitive Blue Tilapia ().Frontiers in Genetics2019
30690150Short- and long-term low-salinity acclimation effects on the branchial and intestinal gene expression in the European seabass (Dicentrarchus labrax).Comparative biochemistry and physiology. Part A, Molecular & integrative physiology2019
30679075The Road Not Taken: The Rumen Microbiome, Functional Groups, and Community States.Trends in Microbiology2019
30784404Cell-surface display of designer cellulosomes by Lactobacillus plantarum.Methods in Enzymology2019
31246943Modeling the temporal dynamics of the gut microbial community in adults and infants.PLoS Computational Biology2019
31050730Islands in the stream: from individual to communal fiber degradation in the rumen ecosystem.FEMS Microbiology Reviews2019
31197163Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance.Nature Communications2019
29453253Assembly of Synthetic Functional Cellulosomal Structures onto the Cell Surface of Lactobacillus plantarum, a Potent Member of the Gut Microbiome.Applied and Environmental Microbiology2018
30454554Host genetic selection for cold tolerance shapes microbiome composition and modulates its response to temperature.eLife2018
30210474Insights Into Culturomics of the Rumen Microbiome.Frontiers in Microbiology2018
29921849Microbiome niche modification drives diurnal rumen community assembly, overpowering individual variability and diet effects.ISME Journal2018
30139398Review: The compositional variation of the rumen microbiome and its effect on host performance and methane emission.Animal2018
30138368Dietary salt levels affect digestibility, intestinal gene expression, and the microbiome, in Nile tilapia (Oreochromis niloticus).PLoS ONE2018
30319557Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future.Front Microbiol2018
27712009Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome.Environmental Microbiology2017
28811339Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow's Capacity To Harvest Energy from Its Feed.mBio2017
28532526Effect of feeding long or short wheat hay v. wheat silage in the ration of lactating cows on intake, milk production and digestibility.Animal2017
28654196Compositional and functional dynamics of the bovine rumen methanogenic community across different developmental stages.Environmental Microbiology2017
27609699Effect of wheat hay particle size and replacement of wheat hay with wheat silage on rumen pH, rumination and digestibility in ruminally cannulated non-lactating cows.Animal2017
28003256Recycler: an algorithm for detecting plasmids from de novo assembly graphs.Bioinformatics2017
27696646Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal community.Environ Microbiol2017
27555215Lysozyme activity of the Ruminococcus champanellensis cellulosome.Environmental Microbiology2016
27152936Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants.ISME Journal2016
26568514Effect of feeding ensiled mixture of pomegranate pulp and drier feeds on digestibility and milk performance in dairy cows.Journal of Dairy Research2016
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