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Author Details

Lachlan J M Coin
The Peter Doherty Institute for Infection and Immunity, The University of Melbourne
2003
141
49
PMIDPaper TitleJournal TitlePublished Year
36828918Detection of Streptococcus pyogenes M1<sub>UK</sub> in Australia and characterization of the mutation driving enhanced expression of superantigen SpeA.Nat Commun2023
37597512Diagnosis of childhood febrile illness using a multi-class blood RNA molecular signature.Med2023
37890901A multi-platform approach to identify a blood-based host protein signature for distinguishing between bacterial and viral infections in febrile children (PERFORM): a multi-cohort machine learning study.Lancet Digit Health2023
37874948ProsperousPlus: a one-stop and comprehensive platform for accurate protease-specific substrate cleavage prediction and machine-learning model construction.Brief Bioinform2023
37552534Drug resistance prediction for <i>Mycobacterium tuberculosis</i> with reference graphs.Microb Genom2023
36839561Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of <i>Fusarium oxysporum</i> f. sp. <i>cubense</i> in <i>Musa acuminata</i> ssp. <i>malaccensis</i>.Pathogens2023
37150785ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species.Brief Bioinform2023
36828918Detection of Streptococcus pyogenes M1<sub>UK</sub> in Australia and characterization of the mutation driving enhanced expression of superantigen SpeA.Nat Commun2023
37255317Diagnosis of Multisystem Inflammatory Syndrome in Children by a Whole-Blood Transcriptional Signature.J Pediatric Infect Dis Soc2023
36801582In-sewer decay and partitioning of Campylobacter jejuni and Campylobacter coli and implications for their wastewater surveillance.Water Res2023
37375510Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of <i>Fusarium oxysporum</i> f. sp. <i>cubense</i> Using <i>Musa acuminata</i> ssp. <i>malaccensis</i>.Pathogens2023
37356289Digerati - A multipath parallel hybrid deep learning framework for the identification of mycobacterial PE/PPE proteins.Comput Biol Med2023
37523564SARS-CoV-2 mouse adaptation selects virulence mutations that cause TNF-driven age-dependent severe disease with human correlates.Proc Natl Acad Sci U S A2023
37291763TIMER is a Siamese neural network-based framework for identifying both general and species-specific bacterial promoters.Brief Bioinform2023
37597512Diagnosis of childhood febrile illness using a multi-class blood RNA molecular signature.Med2023
37523564SARS-CoV-2 mouse adaptation selects virulence mutations that cause TNF-driven age-dependent severe disease with human correlates.Proc Natl Acad Sci U S A2023
37552534Drug resistance prediction for <i>Mycobacterium tuberculosis</i> with reference graphs.Microb Genom2023
37890901A multi-platform approach to identify a blood-based host protein signature for distinguishing between bacterial and viral infections in febrile children (PERFORM): a multi-cohort machine learning study.Lancet Digit Health2023
37874948ProsperousPlus: a one-stop and comprehensive platform for accurate protease-specific substrate cleavage prediction and machine-learning model construction.Brief Bioinform2023
37291763TIMER is a Siamese neural network-based framework for identifying both general and species-specific bacterial promoters.Brief Bioinform2023
37255317Diagnosis of Multisystem Inflammatory Syndrome in Children by a Whole-Blood Transcriptional Signature.J Pediatric Infect Dis Soc2023
37150785ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species.Brief Bioinform2023
37375510Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of <i>Fusarium oxysporum</i> f. sp. <i>cubense</i> Using <i>Musa acuminata</i> ssp. <i>malaccensis</i>.Pathogens2023
37356289Digerati - A multipath parallel hybrid deep learning framework for the identification of mycobacterial PE/PPE proteins.Comput Biol Med2023
36839561Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of <i>Fusarium oxysporum</i> f. sp. <i>cubense</i> in <i>Musa acuminata</i> ssp. <i>malaccensis</i>.Pathogens2023
36801582In-sewer decay and partitioning of Campylobacter jejuni and Campylobacter coli and implications for their wastewater surveillance.Water Res2023
34729589Positive-unlabeled learning in bioinformatics and computational biology: a brief review.Brief Bioinform2022
35464437Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 <i>In Vitro</i> Infection.Front Immunol2022
35524232Evolution and spread of a highly drug resistant strain of Mycobacterium tuberculosis in Papua New Guinea.BMC Infect Dis2022
36103517A lipoglycopeptide antibiotic for Gram-positive biofilm-related infections.Sci Transl Med2022
36007525Variation in CFHR3 determines susceptibility to meningococcal disease by controlling factor H concentrations.Am J Hum Genet2022
35799358DeepGenGrep: a general deep learning-based predictor for multiple genomic signals and regions.Bioinformatics2022
35659881Assessment of the 2021 WHO Mycobacterium tuberculosis drug resistance mutation catalogue on an independent dataset.Lancet Microbe2022
34729589Positive-unlabeled learning in bioinformatics and computational biology: a brief review.Brief Bioinform2022
35171290Phylodynamic Inference of Bacterial Outbreak Parameters Using Nanopore Sequencing.Mol Biol Evol2022
35021193Critical assessment of computational tools for prokaryotic and eukaryotic promoter prediction.Brief Bioinform2022
35119431Understanding Detrimental Host Response to Infection-The Promise of Transcriptomics.Pediatr Crit Care Med2022
35140886Computational analysis and prediction of PE_PGRS proteins using machine learning.Comput Struct Biotechnol J2022
35057759Whole genome deep sequencing analysis of cell-free DNA in samples with low tumour content.BMC Cancer2022
35799358DeepGenGrep: a general deep learning-based predictor for multiple genomic signals and regions.Bioinformatics2022
35464437Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 <i>In Vitro</i> Infection.Front Immunol2022
35659881Assessment of the 2021 WHO Mycobacterium tuberculosis drug resistance mutation catalogue on an independent dataset.Lancet Microbe2022
35524232Evolution and spread of a highly drug resistant strain of Mycobacterium tuberculosis in Papua New Guinea.BMC Infect Dis2022
36103517A lipoglycopeptide antibiotic for Gram-positive biofilm-related infections.Sci Transl Med2022
36007525Variation in CFHR3 determines susceptibility to meningococcal disease by controlling factor H concentrations.Am J Hum Genet2022
35119431Understanding Detrimental Host Response to Infection-The Promise of Transcriptomics.Pediatr Crit Care Med2022
35057759Whole genome deep sequencing analysis of cell-free DNA in samples with low tumour content.BMC Cancer2022
35171290Phylodynamic Inference of Bacterial Outbreak Parameters Using Nanopore Sequencing.Mol Biol Evol2022
35140886Computational analysis and prediction of PE_PGRS proteins using machine learning.Comput Struct Biotechnol J2022
35021193Critical assessment of computational tools for prokaryotic and eukaryotic promoter prediction.Brief Bioinform2022
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Collaborators

Marjo-Riitta Järvelin
Co-authored papers 33
Paul Elliott
Co-authored papers 22
Anna-Liisa Hartikainen
Co-authored papers 21
Philippe Froguel
Co-authored papers 20
Mark I McCarthy
Co-authored papers 19
Victoria J Wright
Imperial College London
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Leena Peltonen
Co-authored papers 17
Anneli Pouta
Co-authored papers 16
Marika Kaakinen
Co-authored papers 14
G??rard Waeber
Centre hospitalier universitaire vaudois
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Peter Vollenweider
Lausanne University Hospital and University of Lausanne
Co-authored papers 13
Nicholas J Wareham
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Panos Deloukas
William Harvey Research Institute, Queen Mary University of London
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Inga Prokopenko
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Gudmar Thorleifsson
deCODE genetics/Amgen Inc.
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Kari Stefansson
University of Iceland
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Ulla Sovio
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Andr?? G Uitterlinden
Erasmus University Medical Center
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Gon??alo R Abecasis
Regeneron Pharmaceuticals Inc.
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Albert Hofman
Harvard T.H. Chan School of Public Health
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Unnur Thorsteinsdottir
University of Iceland
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Cornelia M van Duijn
University of Oxford
Co-authored papers 12
David P Strachan
Co-authored papers 12
Jing Hua Zhao
Co-authored papers 12
Nicholas J Timpson
Co-authored papers 12
Jaana Laitinen
Co-authored papers 12
Vincent Mooser
McGill University
Co-authored papers 12
Serena Sanna
Co-authored papers 11
Nelson B Freimer
Co-authored papers 11
Tim D Spector
King's College London
Co-authored papers 11
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