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Author Details

Billy W Newton
University of California San Francisco
2009
22
16
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37019383Quantitative Proteomic Analysis Reveals apoE4-Dependent Phosphorylation of the Actin-Regulating Protein VASP.Mol Cell Proteomics2023
37758692Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets.Nat Commun2023
35695185DLX1 and the NuRD complex cooperate in enhancer decommissioning and transcriptional repression.Development2022
34166681Endosomal cAMP production broadly impacts the cellular phosphoproteome.J Biol Chem2021
33854239The AMBRA1 E3 ligase adaptor regulates the stability of cyclin D.Nature2021
30883359Neuronal Apolipoprotein E4 Expression Results in Proteome-Wide Alterations and Compromises Bioenergetic Capacity by Disrupting Mitochondrial Function.J Alzheimers Dis2019
30833725Identification of antiviral roles for the exon-junction complex and nonsense-mediated decay in flaviviral infection.Nat Microbiol2019
30377154The Yeast DNA Damage Checkpoint Kinase Rad53 Targets the Exoribonuclease, Xrn1.G3 (Bethesda)2018
30166453CRL4<sup>AMBRA1</sup> targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling.EMBO J2018
29845934The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.Elife2018
27879340G Protein-Coupled Receptor Endocytosis Confers Uniformity in Responses to Chemically Distinct Ligands.Mol Pharmacol2017
25381059Acetylome profiling reveals overlap in the regulation of diverse processes by sirtuins, gcn5, and esa1.Mol Cell Proteomics2015
26504226Discovery and functional characterization of a neomorphic PTEN mutation.Proc Natl Acad Sci U S A2015
26161950Prb1 Protease Activity Is Required for Its Recognition by the F-Box Protein Saf1.Biochemistry2015
25843712NF-κB-activating complex engaged in response to EGFR oncogene inhibition drives tumor cell survival and residual disease in lung cancer.Cell Rep2015
25875391Pharmacological dimerization and activation of the exchange factor eIF2B antagonizes the integrated stress response.Elife2015
25981045Lineage-Specific Viral Hijacking of Non-canonical E3 Ubiquitin Ligase Cofactors in the Evolution of Vif Anti-APOBEC3 Activity.Cell Rep2015
25616068A combined proteomics/genomics approach links hepatitis C virus infection with nonsense-mediated mRNA decay.Mol Cell2015
25544563Global mapping of herpesvirus-host protein complexes reveals a transcription strategy for late genes.Mol Cell2015
22903721Proteomic methods for biomarker discovery in a rat model of alcohol steatosis.Methods Mol Biol2012
21815628Proteomic analysis of 3T3-L1 adipocyte mitochondria during differentiation and enlargement.J Proteome Res2011
19714808Liver proteome analysis in a rodent model of alcoholic steatosis.J Proteome Res2009
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Collaborators

Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 19
Jeffrey R Johnson
Gladstone Institutes
Co-authored papers 17
Tasha Johnson
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 5
Gwendolyn M Jang
Gladstone Institute of Data Science and Biotechnology, J. David Gladstone Institutes
Co-authored papers 5
Danielle L Swaney
J. David Gladstone Institutes
Co-authored papers 4
David P Toczyski
University of California San Francisco
Co-authored papers 3
David Jimenez-Morales
J. David Gladstone Institutes
Co-authored papers 3
John Von Dollen
University of California San Francisco
Co-authored papers 3
Erik Verschueren
University of California San Francisco
Co-authored papers 3
Judd F Hultquist
Northwestern University Feinberg School of Medicine
Co-authored papers 3
Julie Horner
Co-authored papers 2
Manon Eckhardt
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 2
Michelle Trester-Zedlitz
University of California San Francisco
Co-authored papers 2
Adam L Orr
Appel Alzheimer's Disease Research Institute
Co-authored papers 2
Robert W Mahley
Gladstone Institute of Neurological Disease
Co-authored papers 2
Priya S Shah
University of California davis
Co-authored papers 2
John D Gross
Department of Pharmaceutical Chemistry, University of California san francisco
Co-authored papers 2
Si-Han Chen
West China Hospital, Sichuan University
Co-authored papers 2
Holly Ramage
Sidney Kimmel Medical College, Thomas Jefferson University
Co-authored papers 2
Nikoleta G Tsvetanova
Duke University
Co-authored papers 2
Kevan M Shokat
University of California San Francisco
Co-authored papers 2
Mark von Zastrow
University of California san francisco
Co-authored papers 2
Francisco M De La Vega
Stanford University School of Medicine
Co-authored papers 1
Edward L Tang
Co-authored papers 1
Carlos D Bustamante
Stanford University
Co-authored papers 1
Edel M McCrea
Stanford University
Co-authored papers 1
Alan D Frankel
University of California san francisco
Co-authored papers 1
Preethi Srinivasan
Stanford University
Co-authored papers 1
Michael Downey
Ottawa Institute of Systems Biology, University of Ottawa
Co-authored papers 1
Alexander S Jureka
University of Alabama at Birmingham
Co-authored papers 1
Release 1.2