|
| 36879535 | Improved hepatitis delta virus genome characterization by single molecule full-length genome sequencing combined with VIRiONT pipeline. | J Med Virol | 2023 |
| 37503561 | Determinants of protection against SARS-CoV-2 Omicron BA.1 and Delta infections in fully vaccinated outpatients. | J Med Virol | 2023 |
| 38046204 | Virological and clinical features of acute respiratory failure associated with COVID-19 in pregnancy: a case-control study. | Crit Care Resusc | 2023 |
| 37453453 | Novel UL23 and UL30 substitutions in HSV1 and HSV2 viruses related to polymorphism or drug resistance. | Antiviral Res | 2023 |
| 37052679 | A third vaccine dose equalises the levels of effectiveness and immunogenicity of heterologous or homologous COVID-19 vaccine regimens, Lyon, France, December 2021 to March 2022. | Euro Surveill | 2023 |
| 37080996 | Long-term humoral response following Delta and Omicron BA.1 co-infection. | NPJ Vaccines | 2023 |
| 37261732 | Emergence, spread and characterisation of the SARS-CoV-2 variant B.1.640 circulating in France, October 2021 to February 2022. | Euro Surveill | 2023 |
| 35283309 | Investigation of vaccine breakthrough infections by vaccination scheme during the Delta variant wave in France. | Clin Microbiol Infect | 2022 |
| 35703398 | A Short COVID-19 Outbreak in an Isolated Pacific Island: A Retrospective Study. | Asia Pac J Public Health | 2022 |
| 35792280 | Evidence of co-infections during Delta and Omicron SARS-CoV-2 variants co-circulation through prospective screening and sequencing. | Clin Microbiol Infect | 2022 |
| 35636438 | Sotrovimab drives SARS-CoV-2 omicron variant evolution in immunocompromised patients. | Lancet Microbe | 2022 |
| 35632697 | Metagenomic Analysis Reveals High Abundance of Torque Teno Mini Virus in the Respiratory Tract of Children with Acute Respiratory Illness. | Viruses | 2022 |
| 35632661 | SARS-CoV-2 Omicron Variant, Lineage BA.1, Is Associated with Lower Viral Load in Nasopharyngeal Samples Compared to Delta Variant. | Viruses | 2022 |
| 35362406 | Impact of the Omicron variant on SARS-CoV-2 reinfections in France, March 2021 to February 2022. | Euro Surveill | 2022 |
| 35594785 | Clinical and phylogenetic influenza dynamics for the 2019-20 season in the global influenza hospital surveillance network (GIHSN) - Pilot study. | J Clin Virol | 2022 |
| 36309317 | Genomic evolution of SARS-CoV-2 in Reunion Island. | Infect Genet Evol | 2022 |
| 36274062 | Detection and prevalence of SARS-CoV-2 co-infections during the Omicron variant circulation in France. | Nat Commun | 2022 |
| 36087643 | Simultaneous co-infection with Omicron (B.1.1.529) and Delta (21A/478K.V1) SARS-CoV-2 variants confirmed by whole genome sequencing. | Int J Infect Dis | 2022 |
| 36016297 | Evaluation of EPISEQ SARS-CoV-2 and a Fully Integrated Application to Identify SARS-CoV-2 Variants from Several Next-Generation Sequencing Approaches. | Viruses | 2022 |
| 36016262 | The Role of Lebanon in the COVID-19 Butterfly Effect: The B.1.398 Example. | Viruses | 2022 |
| 33478625 | Two-step strategy for the identification of SARS-CoV-2 variant of concern 202012/01 and other variants with spike deletion H69-V70, France, August to December 2020. | Euro Surveill | 2021 |
| 33900195 | Novel SARS-CoV-2 Variant Derived from Clade 19B, France. | Emerg Infect Dis | 2021 |
| 35002989 | Bacterial Signatures of Paediatric Respiratory Disease: An Individual Participant Data Meta-Analysis. | Front Microbiol | 2021 |
| 34763750 | Re-emergence of enterovirus D68 in Europe after easing the COVID-19 lockdown, September 2021. | Euro Surveill | 2021 |
| 34469708 | Co-infection with Legionella and SARS-CoV-2, France, March 2020. | Emerg Infect Dis | 2021 |
| 34176436 | Live virus neutralization testing in convalescent patients and subjects vaccinated against 19A, 20B, 20I/501Y.V1 and 20H/501Y.V2 isolates of SARS-CoV-2. | Emerg Microbes Infect | 2021 |
| 34341781 | Bamlanivimab as monotherapy in two immunocompromised patients with COVID-19. | Lancet Microbe | 2021 |
| 32560044 | Performance Assessment of SARS-CoV-2 PCR Assays Developed by WHO Referral Laboratories. | J Clin Med | 2020 |
| 33318859 | Evaluation of NGS-based approaches for SARS-CoV-2Â whole genome characterisation. | Virus Evol | 2020 |
| 33036303 | Comparison of Nucleic Acid Extraction Methods for a Viral Metagenomics Analysis of Respiratory Viruses. | Microorganisms | 2020 |
| 32835345 | Systematic SARS-CoV-2 screening in cerebrospinal fluid during the COVID-19 pandemic. | Lancet Microbe | 2020 |
| 32234449 | Molecular characterization of SARS-CoV-2 in the first COVID-19 cluster in France reveals an amino acid deletion in nsp2 (Asp268del). | Clin Microbiol Infect | 2020 |
| 30670143 | Emergence of enterovirus D68 clade D1, France, August to November 2018. | Euro Surveill | 2019 |
| 31739505 | Impact of Pregnancy on Intra-Host Genetic Diversity of Influenza A Viruses in Hospitalised Women: A Retrospective Cohort Study. | J Clin Med | 2019 |
| 31881798 | Impact of Pregnancy on Intra-Host Genetic Diversity of Influenza A Viruses in Hospitalised Women: A Retrospective Cohort Study. | J Clin Med | 2019 |
| 31620095 | Metagenomic Investigation of Torque Teno Mini Virus-SH in Hematological Patients. | Front Microbiol | 2019 |
| 30695992 | Whole Genome Sequencing of A(H3N2) Influenza Viruses Reveals Variants Associated with Severity during the 2016â»2017 Season. | Viruses | 2019 |
| 30441786 | Metagenomic Next-Generation Sequencing Reveals Individual Composition and Dynamics of Anelloviruses during Autologous Stem Cell Transplant Recipient Management. | Viruses | 2018 |
| 33111674 | [Viral genomic diversity: Characterization and consequences on respiratory infections virulence]. | Virologie (Montrouge) | 2018 |
| 33111673 | [Characterization and impact of respiratory microbiota on viral infections]. | Virologie (Montrouge) | 2018 |
| 30219205 | [Quadrivalent influenza vaccine: What is changed and what are the benefits?] | Presse Med | 2018 |
| 30229724 | Molecular diversity and biennial circulation of enterovirus D68: a systematic screening study in Lyon, France, 2010 to 2016. | Euro Surveill | 2018 |
| 30373528 | Quality control implementation for universal characterization of DNA and RNA viruses in clinical respiratory samples using single metagenomic next-generation sequencing workflow. | BMC Infect Dis | 2018 |
| 30315875 | Clinical management and viral genomic diversity analysis of a child's influenza A(H1N1)pdm09 infection in the context of a severe combined immunodeficiency. | Antiviral Res | 2018 |
| 28780426 | Characterization of oseltamivir-resistant influenza virus populations in immunosuppressed patients using digital-droplet PCR: Comparison with qPCR and next generation sequencing analysis. | Antiviral Res | 2017 |
| 28169437 | A new real-time RT-PCR targeting VP4-VP2 to detect and quantify enterovirus D68 in respiratory samples. | J Med Virol | 2017 |
| 29099809 | Impact of the Respiratory Microbiome on Host Responses to Respiratory Viral Infection. | Vaccines (Basel) | 2017 |
| 28884664 | Early nasopharyngeal microbial signature associated with severe influenza in children: a retrospective pilot study. | J Gen Virol | 2017 |
| 26867183 | Integrated Omics Analysis of Pathogenic Host Responses during Pandemic H1N1 Influenza Virus Infection: The Crucial Role of Lipid Metabolism. | Cell Host Microbe | 2016 |
| 27663205 | The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus. | BMC Syst Biol | 2016 |