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Author Details

Ulf Schaefer
2008
27
17
PMIDPaper TitleJournal TitlePublished Year
37271666Investigating Pseudomonas aeruginosa population structure and frequency of cross-infection in UK cystic fibrosis clinics - a reference laboratory perspective.J Cyst Fibros2023
33650201Risk of symptomatic COVID-19 due to aircraft transmission: a retrospective cohort study of contact-traced flights during England's containment phase.Influenza Other Respir Viruses2021
30888316Identification and typing of Yersinia enterocolitica and Yersinia pseudotuberculosis isolated from human clinical specimens in England between 2004 and 2018.J Med Microbiol2019
31210630Investigation of a Pandoraea apista cluster common to adult and paediatric cystic fibrosis patients attending two hospitals in the same city.J Med Microbiol2019
29494619Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.PLoS Comput Biol2018
30135231Evaluation of Whole-Genome Sequencing for Identification and Typing of Vibrio cholerae.J Clin Microbiol2018
29523496Sustained transmission of high-level azithromycin-resistant Neisseria gonorrhoeae in England: an observational study.Lancet Infect Dis2018
27974538Identification of Escherichia coli and Shigella Species from Whole-Genome Sequences.J Clin Microbiol2017
28729954Clinical streptococcal isolates, distinct from <i>Streptococcus pneumoniae,</i> but containing the β-glucosyltransferase <i>tts</i> gene and expressing serotype 37 capsular polysaccharide.PeerJ2017
27069781Identification of Salmonella for public health surveillance using whole genome sequencing.PeerJ2016
26601852An outbreak of high-level azithromycin resistant Neisseria gonorrhoeae in England.Sex Transm Infect2016
27602279MOST: a modified MLST typing tool based on short read sequencing.PeerJ2016
24670764A promoter-level mammalian expression atlas.Nature2014
23175603HOCOMOCO: a comprehensive collection of human transcription factor binding sites models.Nucleic Acids Res2013
22198179DESTAF: a database of text-mined associations for reproductive toxins potentially affecting human fertility.Reprod Toxicol2012
22670148Mutations and binding sites of human transcription factors.Front Genet2012
20880996DDPC: Dragon Database of Genes associated with Prostate Cancer.Nucleic Acids Res2011
22050994Network analysis of microRNAs and their regulation in human ovarian cancer.BMC Syst Biol2011
21930248HCVpro: hepatitis C virus protein interaction database.Infect Genet Evol2011
21326606dPORE-miRNA: polymorphic regulation of microRNA genes.PLoS One2011
20965969TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins.Nucleic Acids Res2011
21085627High sensitivity TSS prediction: estimates of locations where TSS cannot occur.PLoS One2010
18790805Database for exploration of functional context of genes implicated in ovarian cancer.Nucleic Acids Res2009
20003307Deciphering the transcriptional circuitry of microRNA genes expressed during human monocytic differentiation.BMC Genomics2009
19580656DDEC: Dragon database of genes implicated in esophageal cancer.BMC Cancer2009
19099596DDESC: Dragon database for exploration of sodium channels in human.BMC Genomics2008
19088187Genome-wide analysis of cancer/testis gene expression.Proc Natl Acad Sci U S A2008
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Collaborators

Vladimir B Bajic
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 15
Sebastian Schmeier
Massey University
Co-authored papers 8
Alan Christoffels
Co-authored papers 6
Mandeep Kaur
Post Graduate Institute of Medical Education and Research
Co-authored papers 6
Aleksandar Radovanovic
Computational Bioscience Research Center (CBRC)
Co-authored papers 5
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 5
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 4
Yulia A Medvedeva
Research Center of Biotechnology RAS, Russian Academy of Sciences
Co-authored papers 3
Jun Kawai
RIKEN Center for Integrative Medical Sciences
Co-authored papers 3
Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 3
Robin Andersson
University of Copenhagen
Co-authored papers 2
Christine A Wells
The University of Melbourne
Co-authored papers 2
Tom C Freeman
The Roslin Institute, University of Edinburgh
Co-authored papers 2
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 2
Cameron Ross MacPherson
Rigshospitalet, Copenhagen University Hospital
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Albin Sandelin
University of Copenhagen
Co-authored papers 2
Marina Lizio
Cerevance Ltd
Co-authored papers 2
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 2
Geoffrey J Faulkner
Mater Research Institute - University of Queensland
Co-authored papers 2
Ivan V Kulakovskiy
Vavilov Institute of General Genetics, Russian Academy of Sciences
Co-authored papers 2
Oliver Hofmann
University of Melbourne
Co-authored papers 2
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Boris R Jankovic
4700 King Abdullah University of Science and Technology
Co-authored papers 2
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Vsevolod J Makeev
Vavilov Institute of General Genetics, Russian Academy of Sciences
Co-authored papers 2
Peter Heutink
German Center for Neurodegenerative Diseases (DZNE).
Co-authored papers 2
Naoto Kondo
Nagoya City University Graduate School of Medical Sciences
Co-authored papers 2
Winston Hide
Harvard Medical School
Co-authored papers 2
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
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John A C Archer
King Abdullah University of Science and Technology (KAUST)
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