Author details

Full Name

Erica Larschan

Affiliation

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37466240	Sex-specific splicing occurs genome-wide during early <i>Drosophila</i> embryogenesis.	Elife	2023
37873306	The CLAMP GA-binding transcription factor regulates heat stress-induced transcriptional repression by associating with 3D loop anchors.		2023
35325548	Integrating Long-Range Regulatory Interactions to Predict Gene Expression Using Graph Convolutional Networks.	Journal of Computational Biology	2022
35926038	The continuum of <i>Drosophila</i> embryonic development at single-cell resolution.	Science	2022
35072344	Sex-specific aging in animals: Perspective and future directions.	Aging Cell	2022
34342574	CLAMP and Zelda function together to promote <i>Drosophila</i> zygotic genome activation.	Elife	2021
34125906	TIMEOR: a web-based tool to uncover temporal regulatory mechanisms from multi-omics data.	Nucleic Acids Research	2021
34187599	The zinc finger protein CLAMP promotes long-range chromatin interactions that mediate dosage compensation of the Drosophila male X-chromosome.	Epigenetics and Chromatin	2021
32358039	Getting started: altering promoter choice as a mechanism for cell type differentiation.	Genes and Development	2020
31320325	The simultaneous interaction of MSL2 with CLAMP and DNA provides redundancy in the initiation of dosage compensation in males.	Development (Cambridge)	2019
31794753	Dosage Compensation: How to Be Compensatedâ¿¦Or Not?	Current Biology	2019
30808531	Diverse Genome Topologies Characterize Dosage Compensation across Species.	Trends in Genetics	2019
29562179	Differential Occupancy of Two GA-Binding Proteins Promotes Targeting of the Drosophila Dosage Compensation Complex to the Male X Chromosome.	Cell Rep	2018
27995349	The essential Drosophila CLAMP protein differentially regulates non-coding roX RNAs in male and females.	Chromosome Research	2017
28838946	Histone locus regulation by the <i>Drosophila</i> dosage compensation adaptor protein CLAMP.	Genes Dev	2017
28784719	Drosophila Dosage Compensation Loci Associate with a Boundary-Forming Insulator Complex.	Molecular and Cellular Biology	2017
29077765	Enhanced chromatin accessibility of the dosage compensated Drosophila male X-chromosome requires the CLAMP zinc finger protein.	PLoS One	2017
29281702	The Drosophila CLAMP protein associates with diverse proteins on chromatin.	PLoS ONE	2017
27259512	Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types.	Genome Biol	2016
27151365	MNase titration reveals differences between nucleosome occupancy and chromatin accessibility.	Nat Commun	2016
27414415	Expansion of GA Dinucleotide Repeats Increases the Density of CLAMP Binding Sites on the X-Chromosome to Promote Drosophila Dosage Compensation.	PLoS Genet	2016
25164756	Comparative analysis of metazoan chromatin organization.	Nature	2014
24406325	X-marks the spot: X-chromosome identification during dosage compensation.		2014
25161083	Wisdom from the fly.	Trends in Genetics	2014
25102930	A new player in X identification: the CLAMP protein is a key factor in Drosophila dosage compensation.	Chromosome Research	2014
23873939	The CLAMP protein links the MSL complex to the X chromosome during Drosophila dosage compensation.	Genes Dev	2013
22870396	A genome-wide screen identifies genes that affect somatic homolog pairing in Drosophila.	G3: Genes, Genomes, Genetics	2012
22844249	Identification of chromatin-associated regulators of MSL complex targeting in Drosophila dosage compensation.	PLoS Genet	2012
22570616	Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context.	PLoS Genet	2012
21179089	Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.	Nature	2011
21368835	X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila.	Nature	2011
19648925	Drosophila MSL complex globally acetylates H4K16 on the male X chromosome for dosage compensation.	Nat Struct Mol Biol	2009
18724933	A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome.	Cell	2008
17936709	MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism.	Mol Cell	2007
17507677	Regional control of chromatin organization by noncoding roX RNAs and the NURF remodeling complex in Drosophila melanogaster.	Genetics	2007
17592629	Normalization and experimental design for ChIP-chip data.	BMC Bioinformatics	2007
16547173	High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome.	Genes Dev	2006
17381321	MSL complex associates with clusters of actively transcribed genes along the Drosophila male X chromosome.	Cold Spring Harb Symp Quant Biol	2006
15601835	The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription.	Molecular and Cellular Biology	2005
15767671	Evidence that the elongation factor TFIIS plays a role in transcription initiation at GAL1 in Saccharomyces cerevisiae.	Molecular and Cellular Biology	2005
11485989	The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.	Genes and Development	2001