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Author Details

Adam C English
Baylor College of Medicine Human Genome Sequencing Center
2008
20
14
PMIDPaper TitleJournal TitlePublished Year
36778386Structural variation across 138,134 samples in the TOPMed consortium.Res Sq2023
36747810Structural variation across 138,134 samples in the TOPMed consortium.bioRxiv2023
36575487Truvari: refined structural variant comparison preserves allelic diversity.Genome Biol2022
36644891xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments.Gigascience2022
33760063muCNV: Genotyping Structural Variants for Population-level Sequencing.Bioinformatics2021
32541955A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
32699374Author Correction: A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
30820572Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community.Database (Oxford)2019
30827684Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2.Cell2019
29300007Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host.Nature2018
30279509Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects.Nat Commun2018
29220441Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community.Database (Oxford)2017
28984202SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads.BMC Genomics2017
25886820Assessing structural variation in a personal genome-towards a human reference diploid genome.BMC Genomics2015
25887218PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations.BMC Genomics2015
24475911Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline.BMC Bioinformatics2014
24915764PBHoney: identifying genomic variants via long-read discordance and interrupted mapping.BMC Bioinformatics2014
23185243Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.PLoS One2012
20525311Prevalence of alternative splicing choices in Arabidopsis thaliana.BMC Plant Biol2010
19127834"Science cannot stop with science" Maurice Blondel and the sciences.J Hist Ideas2008
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Collaborators

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Fritz J Sedlazeck
Baylor College of Medicine
Co-authored papers 8
Donna M Muzny
Baylor College of Medicine
Co-authored papers 8
Eric Boerwinkle
Baylor College of Medicine
Co-authored papers 7
Yi Han
Baylor College of Medicine
Co-authored papers 6
Ginger A Metcalf
Co-authored papers 5
Kim C Worley
Baylor College of Medicine
Co-authored papers 4
James R Lupski
Baylor College of Medicine
Co-authored papers 4
Hyun Min Kang
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Mark J P Chaisson
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Stephen Richards
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Nancy F Hansen
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Nathan Pankratz
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Barry I Freedman
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Monica C Munoz-Torres
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Yingze Zhang
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Aakrosh Ratan
Center for Public Health Genomics, University of Virginia
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Albert V Smith
University of Michigan School of Public Health ann arbor
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Ryan E Mills
University of Michigan Medical School ann arbor
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Camir Ricketts
Institute for Computational Biomedicine, Weill Cornell Medicine of Cornell University
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Kent D Taylor
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Alexandre Rouette
Charles-Bruneau Cancer Center, Centre Hospitalier Universitaire (CHU) Sainte-Justine
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Ryan Kim
Inc. (formerly Macrogen USA)
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Release 1.2