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Author Details

Caroline H Johnson
Yale School of Public Health
2007
87
34
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36113793Hemoglobin normalization outperforms other methods for standardizing dried blood spot metabolomics: A comparative study.Sci Total Environ2023
37086630Discovery of decreased ferroptosis in male colorectal cancer patients with KRAS mutations.Redox Biol2023
37205388Asparagine synthetase and G-protein coupled estrogen receptor are critical responders to nutrient supply in <i>KRAS</i> mutant colorectal cancer.bioRxiv2023
37201090Hepatopancreatobiliary malignancies: time to treatment matters.J Gastrointest Oncol2023
36855917Early-Onset Colorectal Cancer Somatic Gene Mutations by Population Subgroups.Cancer Discov2023
36813666In silico designed mRNA vaccines targeting CA-125 neoantigen in breast and ovarian cancer.Vaccine2023
36473802Targeting ferroptosis to treat colorectal cancer.Trends Cell Biol2023
36909561Discovery of decreased ferroptosis in male colorectal cancer patients with KRAS mutations.bioRxiv2023
36839327Prenatal Choline Supplement in a Maternal Obesity Model Modulates Offspring Hepatic Lipidomes.Nutrients2023
36703079Ferroptosis in colorectal cancer: a future target?Br J Cancer2023
35231839Non-targeted metabolomics and associations with per- and polyfluoroalkyl substances (PFAS) exposure in humans: A scoping review.Environ Int2022
35377425Evaluation of Racial Disparities in Quality of Care for Patients With Gastrointestinal Tract Cancer Treated With Surgery.JAMA Netw Open2022
35765262Development of an Accessible Gene Expression Bioinformatics Pipeline to Study Driver Mutations of Colorectal Cancer.Altern Lab Anim2022
36274154Bile acid distributions, sex-specificity, and prognosis in colorectal cancer.Biol Sex Differ2022
35902589TidyMass an object-oriented reproducible analysis framework for LC-MS data.Nat Commun2022
36090030Asparagine, colorectal cancer, and the role of sex, genes, microbes, and diet: A narrative review.Front Mol Biosci2022
35948941Evaluation of the role of KPNA2 mutations in breast cancer prognosis using bioinformatics datasets.BMC Cancer2022
35208238Asparagine Metabolism in Tumors Is Linked to Poor Survival in Females with Colorectal Cancer: A Cohort Study.Metabolites2022
32424331Accounting for urinary dilution in peri-implantation samples: implications for creatinine adjustment and specimen pooling.J Expo Sci Environ Epidemiol2021
33693819Identification of Dose-Dependent DNA Damage and Repair Responses From Subchronic Exposure to 1,4-Dioxane in Mice Using a Systems Analysis Approach.Toxicol Sci2021
34503214Molecular Mechanisms of Alcohol-Induced Colorectal Carcinogenesis.Cancers (Basel)2021
34188068YIV-906 potentiated anti-PD1 action against hepatocellular carcinoma by enhancing adaptive and innate immunity in the tumor microenvironment.Sci Rep2021
34128837ENT2 facilitates brain endothelial cell penetration and blood-brain barrier transport by a tumor-targeting anti-DNA autoantibody.JCI Insight2021
33962358Intratumour microbiome associated with the infiltration of cytotoxic CD8+ T cells and patient survival in cutaneous melanoma.Eur J Cancer2021
34230210Kynurenic acid may underlie sex-specific immune responses to COVID-19.Sci Signal2021
33420964Use of Untargeted Metabolomics to Explore the Air Pollution-Related Disease Continuum.Curr Environ Health Rep2021
33413474Immune landscape and prognostic immune-related genes in KRAS-mutant colorectal cancer patients.J Transl Med2021
32184446Sex Differences in Colon Cancer Metabolism Reveal A Novel Subphenotype.Sci Rep2020
31953830Analyzing Metabolomics Data for Environmental Health and Exposome Research.Methods Mol Biol2020
31760268Molecular Pathway Analysis Indicates a Distinct Metabolic Phenotype in Women With Right-Sided Colon Cancer.Transl Oncol2020
33415160Gene Alterations of N6-Methyladenosine (m<sup>6</sup>A) Regulators in Colorectal Cancer: A TCGA Database Study.Biomed Res Int2020
32575361Tumor Tissue-Specific Biomarkers of Colorectal Cancer by Anatomic Location and Stage.Metabolites2020
30458352Evaluation of potential carcinogenicity of organic chemicals in synthetic turf crumb rubber.Environ Res2019
31690722Metabolic dysregulation in vitamin E and carnitine shuttle energy mechanisms associate with human frailty.Nat Commun2019
32280475Joint effect of pre-operative anemia and perioperative blood transfusion on outcomes of colon-cancer patients undergoing colectomy.Gastroenterol Rep (Oxf)2019
313025501,4-Dioxane as an emerging water contaminant: State of the science and evaluation of research needs.Sci Total Environ2019
31546636Normalizing Untargeted Periconceptional Urinary Metabolomics Data: A Comparison of Approaches.Metabolites2019
29317762Carnitine palmitoyltransferase 1C regulates cancer cell senescence through mitochondria-associated metabolic reprograming.Cell Death Differ2018
30460196Defining Early-Onset Colon and Rectal Cancers.Front Oncol2018
29755761Distinctive features of gastrointestinal stromal tumors arising from the colon and rectum.J Gastrointest Oncol2018
29747066Spontaneous DNA damage to the nuclear genome promotes senescence, redox imbalance and aging.Redox Biol2018
29374508Re-engineering and evaluation of anti-DNA autoantibody 3E10 for therapeutic applications.Biochem Biophys Res Commun2018
29373992Beyond genomics: understanding exposotypes through metabolomics.Hum Genomics2018
29482659Yale School of Public Health Symposium on tissue imaging mass spectrometry: illuminating phenotypic heterogeneity and drug disposition at the molecular level.Hum Genomics2018
29337187Metabolomics Reveals that Dietary Xenoestrogens Alter Cellular Metabolism Induced by Palbociclib/Letrozole Combination Cancer Therapy.Cell Chem Biol2018
28642837Environmental influences in the etiology of colorectal cancer: the premise of metabolomics.Curr Pharmacol Rep2017
28334197PPARα regulates tumor cell proliferation and senescence via a novel target gene carnitine palmitoyltransferase 1C.Carcinogenesis2017
28448069Systems biology guided by XCMS Online metabolomics.Nat Methods2017
29221465Yale school of public health symposium on lifetime exposures and human health: the exposome; summary and future reflections.Hum Genomics2017
29093815Metabolomics guided pathway analysis reveals link between cancer metastasis, cholesterol sulfate, and phospholipids.Cancer Metab2017
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Collaborators

Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 23
Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde
Co-authored papers 17
Co-authored papers 14
Co-authored papers 14
University of Lausanne
Co-authored papers 13
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 10
Scripps Center for Metabolomics, The Scripps Research Institute
Co-authored papers 7
Nanyang Technological University, Fudan University
Co-authored papers 5
Yale School of Medicine
Co-authored papers 3
Viral Information Institute, San Diego State University
Co-authored papers 3
University of British Columbia
Co-authored papers 3
Center for Biofilm Engineering (CBE), Montana State University
Co-authored papers 3
the Scripps Research Institute
Co-authored papers 2
Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 2
University of Minnesota
Co-authored papers 2
Institute of Systems, University of Liverpool
Co-authored papers 2
University of Colorado School of Medicine
Co-authored papers 2
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 2
Lawrence Berkeley National Laboratory
Co-authored papers 2
University of Minnesota
Co-authored papers 2
Lawrence Berkeley National Laboratory
Co-authored papers 2
Clinical Biomarkers Laboratory, Emory University
Co-authored papers 2
Yale University
Co-authored papers 1
Yale School of Public Health
Co-authored papers 1
Vanderbilt University
Co-authored papers 1
College of Veterinary Medicine, North Carolina State University
Co-authored papers 1
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The Scripps Research Institute
Co-authored papers 1
University of Georgia
Co-authored papers 1