Skip to Main Content

Author Details

Yuanfang Guan
University of Michigan ann arbor
2007
115
32
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36976789Developing better digital health measures of Parkinson's disease using free living data and a crowdsourced data analysis challenge.PLOS Digit Health2023
36987778Computational approaches for detecting disease-associated alternative splicing events.Brief Bioinform2023
37041243Harmonizing across datasets to improve the transferability of drug combination prediction.Commun Biol2023
32991288Spatial Pyramid Pooling With 3D Convolution Improves Lung Cancer Detection.IEEE/ACM Trans Comput Biol Bioinform2022
37808948Multilevel Modeling of Joint Damage in Rheumatoid Arthritis.Adv Intell Syst2022
35468141Micro-dissection and integration of long and short reads to create a robust catalog of kidney compartment-specific isoforms.PLoS Comput Biol2022
35529103Asymmetric Predictive Relationships Across Histone Modifications.Nat Mach Intell2022
36039302Generic medical concept embedding and time decay for diverse patient outcome prediction tasks.iScience2022
35880126Protocol for using Ciclops to build models trained on cross-platform transcriptome data for clinical outcome prediction.STAR Protoc2022
34953465An integrated brain-specific network identifies genes associated with neuropathologic and clinical traits of Alzheimer's disease.Brief Bioinform2022
35042771Impaired Oligodendrocyte Maturation Is an Early Feature in SCA3 Disease Pathogenesis.J Neurosci2022
35039601Heterogeneous digital biomarker integration out-performs patient self-reports in predicting Parkinson's disease.Commun Biol2022
34850130TissueNexus: a database of human tissue functional gene networks built with a large compendium of curated RNA-seq data.Nucleic Acids Res2022
35243261Machine learning for artemisinin resistance in malaria treatment across <i>in vivo-in vitro</i> platforms.iScience2022
35230244Enabling Eating Detection in a Free-living Environment: Integrative Engineering and Machine Learning Study.J Med Internet Res2022
34571534Representation of molecules for drug response prediction.Brief Bioinform2022
34061750An Ensemble of U-Net Models for Kidney Tumor Segmentation With CT Images.IEEE/ACM Trans Comput Biol Bioinform2022
32864815COVID-19 drug repurposing: A review of computational screening methods, clinical trials, and protein interaction assays.Med Res Rev2021
33627141Re-evaluating experimental validation in the Big Data Era: a conceptual argument.Genome Biol2021
33741685Fast decoding cell type-specific transcription factor binding landscape at single-nucleotide resolution.Genome Res2021
33788970Gene expression profiles of diabetic kidney disease and neuropathy in eNOS knockout mice: Predictors of pathology and RAS blockade effects.FASEB J2021
33659874Assessment of the timeliness and robustness for predicting adult sepsis.iScience2021
35079710Auto-annotating sleep stages based on polysomnographic data.Patterns (N Y)2021
34617014Deep learning identifies erroneous microarray-based, gene-level conclusions in literature.NAR Genom Bioinform2021
34146472Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.Cell Syst2021
34312611A survival model generalized to regression learning algorithms.Nat Comput Sci2021
34258599Timesias: A machine learning pipeline for predicting outcomes from time-series clinical records.STAR Protoc2021
34195686Crowdsourcing assessment of maternal blood multi-omics for predicting gestational age and preterm birth.Cell Rep Med2021
34308294Neural-ODE for pharmacokinetics modeling and its advantage to alternative machine learning models in predicting new dosing regimens.iScience2021
33398048DeepSleep convolutional neural network allows accurate and fast detection of sleep arousal.Commun Biol2021
33303494Evidence of widespread, independent sequence signature for transcription factor cobinding.Genome Res2021
32789747Antisense Oligonucleotide Therapy Targeted Against ATXN3 Improves Potassium Channel-Mediated Purkinje Neuron Dysfunction in Spinocerebellar Ataxia Type 3.Cerebellum2021
31410451Machine learning empowers phosphoproteome prediction in cancers.Bioinformatics2020
32029221Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures.Mol Metab2020
31868908Deep Residual Neural Networks Resolve Quartet Molecular Phylogenies.Mol Biol Evol2020
32045490Machine Learning for Cancer Drug Combination.Clin Pharmacol Ther2020
31978751Treatment Stratification of Patients with Metastatic Castration-Resistant Prostate Cancer by Machine Learning.iScience2020
33073255Detecting Asymmetric Patterns and Localizing Cancers on Mammograms.Patterns (N Y)2020
32770210Graph2GO: a multi-modal attributed network embedding method for inferring protein functions.Gigascience2020
32901013FastClone is a probabilistic tool for deconvoluting tumor heterogeneity in bulk-sequencing samples.Nat Commun2020
32699844Deep Learning Identifies Digital Biomarkers for Self-Reported Parkinson's Disease.Patterns (N Y)2020
32778984Challenge-Enabled Machine Learning to Drug-Response Prediction.AAPS J2020
32280947Three-Plane-assembled Deep Learning Segmentation of Gliomas.Radiol Artif Intell2020
32119094Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms.JAMA Netw Open2020
32257051Cellular, transcriptomic and isoform heterogeneity of breast cancer cell line revealed by full-length single-cell RNA sequencing.Comput Struct Biotechnol J2020
30567711Anchor: trans-cell type prediction of transcription factor binding sites.Genome Res2019
34355123Waking up to data challenges.Nat Mach Intell2019
31870366Joint learning improves protein abundance prediction in cancers.BMC Biol2019
31886876Prognostic model for multiple myeloma progression integrating gene expression and clinical features.Gigascience2019
30060039Clinical applications of machine learning in cardiovascular disease and its relevance to cardiac imaging.Eur Heart J2019
  • 1 - 50 of 115

Recommended Authors

Jake Crawford
Perelman School of Medicine, University of Pennsylvania
Career Start Year 2018
Number of shared co-authors 3
James Zou
Stanford University
Career Start Year 2016
Number of shared co-authors 2
Kahn Rhrissorrakrai
T.J. Watson Research Center
Career Start Year 2008
Number of shared co-authors 12
Junhee Seok
Korea University
Career Start Year 2008
Number of shared co-authors 0
Lana X Garmire
University of Michigan ann arbor
Career Start Year 2007
Number of shared co-authors 4
Hai Fang
University of Bristol
Career Start Year 2006
Number of shared co-authors 9
Hyojung Paik
University of Science and Technology (UST)
Career Start Year 2006
Number of shared co-authors 0
Joel T Dudley
Institute for Next Generation Healthcare
Career Start Year 2006
Number of shared co-authors 11
Joshua W K Ho
The University of Hong Kong
Career Start Year 2006
Number of shared co-authors 1
Avi Ma'ayan
Icahn School of Medicine at Mount Sinai
Career Start Year 2005
Number of shared co-authors 12
Dongxiao Zhu
Wayne State University
Career Start Year 2005
Number of shared co-authors 0
Arnaud Droit
Centre de Recherche du CHU de Quebec-Universite, Universite Laval
Career Start Year 2005
Number of shared co-authors 10
Wenjin Jim Zheng
University of Texas Health Science Center at Houston
Career Start Year 2004
Number of shared co-authors 4
Bin Zhang
Graduate School of Medicine, The University of Tokyo
Career Start Year 2004
Number of shared co-authors 17
Xianghong Jasmine Zhou
David Geffen School of Medicine, University of California at Los Angeles
Career Start Year 2004
Number of shared co-authors 2
Su-In Lee
University of Washington
Career Start Year 2003
Number of shared co-authors 4
Gerald Quon
University of California davis
Career Start Year 2003
Number of shared co-authors 7
Assaf Gottlieb
Center for Precision Health, University of Texas Health Science Center at Houston
Career Start Year 2002
Number of shared co-authors 3
Olivier Elemento
Meyer Cancer Center
Career Start Year 2002
Number of shared co-authors 10
George C Tseng
University of Pittsburgh School of Public Health
Career Start Year 2001
Number of shared co-authors 0
Jean Yee Hwa Yang
The University of Sydney
Career Start Year 2001
Number of shared co-authors 0
Gary D Bader
University of Toronto
Career Start Year 2000
Number of shared co-authors 15
Wei Wang
IBM Thomas J Watson Research Center, University of California Los Angeles, University of North Carolina at Chapel Hill
Career Start Year 1999
Number of shared co-authors 1
Igor Jurisica
Schroeder Arthritis Institute
Career Start Year 1998
Number of shared co-authors 5
Zhongming Zhao
Center for Precision Health, The University of Texas Health Science Center at Houston
Career Start Year 1998
Number of shared co-authors 11
Shannon K McWeeney
Oregon Health & Science University, University of California Berkeley
Career Start Year 1997
Number of shared co-authors 11
Atul J Butte
Bakar Computational Health Sciences Institute, University of California san francisco
Career Start Year 1993
Number of shared co-authors 9
Andrea Califano
Columbia University
Career Start Year 1993
Number of shared co-authors 35
Robert Gentleman
Center for Computational Biomedicine, Harvard Medical School
Career Start Year 1991
Number of shared co-authors 4
Rainer Spang
University of Regensburg
Career Start Year 1969
Number of shared co-authors 2

Collaborators

Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
Co-authored papers 19
Fan Zhu
Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences
Co-authored papers 15
Rajasree Menon
University of Michigan Medical School ann arbor
Co-authored papers 13
Olga G Troyanskaya
Lewis-Sigler Institute for Integrative Genomics, Princeton University
Co-authored papers 12
Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 8
Thea Norman
Bill & Melinda Gates Foundation
Co-authored papers 6
Stephen H Friend
University of Oxford
Co-authored papers 4
Hongdong Li
Gannan Medical University
Co-authored papers 4
Thomas Yu
Co-authored papers 4
Elias Chaibub Neto
University of Wisconsin-Madison.
Co-authored papers 4
Matthias Kretzler
University of Michigan ann arbor
Co-authored papers 4
Xiuzhen Huang
Cedars-Sinai Medical Center.
Co-authored papers 4
Stephen C J Parker
University of Michigan ann arbor
Co-authored papers 3
Bruce Hoff
Hughes Research Laboratories
Co-authored papers 3
Yang Zhang
University of Michigan ann arbor
Co-authored papers 3
Aaron K Wong
Flatiron Institute, Simons Foundation
Co-authored papers 3
Xiaowei Zhan
Southwestern Medical Center, University of Texas
Co-authored papers 3
Chad L Myers
University of Minnesota - Twin Cities
Co-authored papers 3
Gaurav Pandey
Sanjay Gandhi Post Graduate Institute of Medical Sciences
Co-authored papers 3
Jing Tang
University of Helsinki
Co-authored papers 3
Guanghua Xiao
The University of Texas Southwestern Medical Center
Co-authored papers 3
Christopher Y Park
NYU Robert I. Grossman School of Medicine
Co-authored papers 2
Carol J Bult
The Jackson Laboratory Cancer Center
Co-authored papers 2
Lara M Mangravite
Children's Hospital Oakland Research Institute
Co-authored papers 2
Bhramar Mukherjee
Co-authored papers 2
Matthew A Hibbs
Co-authored papers 2
Mehmet Eren Ahsen
Gies College of Business, University of Illinois at Urbana-Champaign.
Co-authored papers 2
Lars Ailo Bongo
UiT The Arctic University of Norway
Co-authored papers 2
Venkatachalapathy S K Balagurusamy
IBM T.J. Watson Research Center - 218
Co-authored papers 2
Kiley Graim
University of Florida.
Co-authored papers 2
Release 1.2