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Author Details

Marcus C Chibucos
Institute for Genome Sciences, University of Maryland School of Medicine
2006
38
19
PMIDPaper TitleJournal TitlePublished Year
34986598ECO: the Evidence and Conclusion Ontology, an update for 2022.Nucleic Acids Res2022
35840884Genomic surveillance of SARS-CoV-2 in US military compounds in Afghanistan reveals multiple introductions and outbreaks of Alpha and Delta variants.BMC Genomics2022
36962352Investigation of an outbreak of COVID-19 among U.S. military personnel and beneficiaries stationed in the Republic of Korea, June-July 2021.PLOS Glob Public Health2022
34244718Standardization of assay representation in the Ontology for Biomedical Investigations.Database (Oxford)2021
31953474Signature of adaptive evolution in olfactory receptor genes in Cory's Shearwater supports molecular basis for smell in procellariiform seabirds.Sci Rep2020
30407590ECO, the Evidence & Conclusion Ontology: community standard for evidence information.Nucleic Acids Res2019
31307550Phenotype annotation with the ontology of microbial phenotypes (OMP).J Biomed Semantics2019
27812948The Evidence and Conclusion Ontology (ECO): Supporting GO Annotations.Methods Mol Biol2017
28582496Vaginal Candida spp. genomes from women with vulvovaginal candidiasis.Pathog Dis2017
27128319The Ontology for Biomedical Investigations.PLoS One2016
27752055Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions.Sci Rep2016
27447865An integrated genomic and transcriptomic survey of mucormycosis-causing fungi.Nat Commun2016
27114493From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF.Database (Oxford)2016
27519257Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 and UKH1.Pathog Dis2016
25957950The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations.Database (Oxford)2015
26556047Implementation of a Pan-Genomic Approach to Investigate Holobiont-Infecting Microbe Interaction: A Case Report of a Leukemic Patient with Invasive Mucormycosis.PLoS One2015
25857734The genome sequence of four isolates from the family Lichtheimiaceae.Pathog Dis2015
24459263Draft Genome Sequence of Mortierella alpina Isolate CDC-B6842.Genome Announc2014
25433798An ontology for microbial phenotypes.BMC Microbiol2014
25217238Single molecule sequencing and genome assembly of a clinical specimen of Loa loa, the causative agent of loiasis.BMC Genomics2014
25052702Standardized description of scientific evidence using the Evidence Ontology (ECO).Database (Oxford)2014
25168586Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys.BMC Genomics2014
23161678Gene Ontology annotations and resources.Nucleic Acids Res2013
24356829Draft Genome Sequences of Human Pathogenic Fungus Geomyces pannorum Sensu Lato and Bat White Nose Syndrome Pathogen Geomyces (Pseudogymnoascus) destructans.Genome Announc2013
24324615Simultaneous transcriptional profiling of bacteria and their host cells.PLoS One2013
22080559The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources.Nucleic Acids Res2012
22711282Kinetic and phylogenetic analysis of plant polyamine uptake transporters.Planta2012
22582382Draft genome sequences of the diarrheagenic Escherichia coli collection.J Bacteriol2012
19773420The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community.Nucleic Acids Res2010
21148394Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome.Science2010
21119014Unifying themes in microbial associations with animal and plant hosts described using the gene ontology.Microbiol Mol Biol Rev2010
19278553Programmed cell death in host-symbiont associations, viewed through the Gene Ontology.BMC Microbiol2009
19576779Describing commonalities in microbial effector delivery using the Gene Ontology.Trends Microbiol2009
19741609Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.Nature2009
19278555Common processes in pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms.BMC Microbiol2009
19278554Common themes in nutrient acquisition by plant symbiotic microbes, described by the Gene Ontology.BMC Microbiol2009
17601166Expressed sequence tags from phytophthora sojae reveal genes specific to development and infection.Mol Plant Microbe Interact2007
16672477Levels of polyamines and kinetic characterization of their uptake in the soybean pathogen Phytophthora sojae.Appl Environ Microbiol2006
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Collaborators

University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 11
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 8
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 7
Oregon State University
Co-authored papers 6
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 5
Texas A&M University and Texas Agrilife Research, College Station
Co-authored papers 5
Texas A&M University, College Station
Co-authored papers 5
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 4
University of Maryland
Co-authored papers 3
University of Geneva
Co-authored papers 3
Stanford University
Co-authored papers 3
Stanford University
Co-authored papers 3
Lawrence Berkeley National Laboratory
Co-authored papers 3
Stanford University
Co-authored papers 3
Cornell University
Co-authored papers 2
Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology
Co-authored papers 2
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 2
Broad Institute of MIT and Harvard
Co-authored papers 2
Knocean Inc.
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University of Washington School of Medicine
Co-authored papers 2
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Genentech Inc.
Co-authored papers 2
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College of Medicine, University of Arkansas for Medical Sciences
Co-authored papers 2
University of Maryland Baltimore County
Co-authored papers 2
Chemistry Institute, Universidade de Sao Paulo - USP
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J. Craig Venter Institute
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carnegie mellon university
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European Bioinformatics Institute (EMBL-EBI)
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Wellcome Sanger Institute
Co-authored papers 2