| 37922067 | Diversity and connectedness of brine shrimp viruses in global hypersaline ecosystems. | Sci China Life Sci | 2024 |
| 36862584 | Substantial viral and bacterial diversity at the bat-tick interface. | Microb Genom | 2023 |
| 37491320 | Expanding the range of the respiratory infectome in Australian feedlot cattle with and without respiratory disease using metatranscriptomics. | Microbiome | 2023 |
| 37757732 | Host specificity shapes fish viromes across lakes on an isolated remote island. | Virology | 2023 |
| 37488810 | Rapid Epidemic Expansion of Chikungunya Virus East/Central/South African Lineage, Paraguay. | Emerg Infect Dis | 2023 |
| 37711483 | Newly identified lineages of porcine hemagglutinating encephalomyelitis virus exhibit respiratory phenotype. | Virus Evol | 2023 |
| 37487325 | Gammaretroviruses, novel viruses and pathogenic bacteria in Australian bats with neurological signs, pneumonia and skin lesions. | Virology | 2023 |
| 37906647 | Evidence for an ancient aquatic origin of the RNA viral order <i>Articulavirales</i>. | Proc Natl Acad Sci U S A | 2023 |
| 37523413 | A 14th century CE Brucella melitensis genome and the recent expansion of the Western Mediterranean clade. | PLoS Pathog | 2023 |
| 37656782 | Genomic epidemiology unveils the dynamics and spatial corridor behind the Yellow Fever virus outbreak in Southern Brazil. | Sci Adv | 2023 |
| 37745602 | Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic. | bioRxiv | 2023 |
| 37941997 | Divergent hepaciviruses, delta-like viruses, and a chu-like virus in Australian marsupial carnivores (dasyurids). | Virus Evol | 2023 |
| 37692898 | Viral community composition of hypersaline lakes. | Virus Evol | 2023 |
| 37692894 | Understanding the divergent evolution and epidemiology of H3N8 influenza viruses in dogs and horses. | Virus Evol | 2023 |
| 37647722 | A metatranscriptomic analysis of geothermal hot springs reveals diverse RNA viruses including the phylum Lenarviricota. | Virology | 2023 |
| 37734372 | Host traits shape virome composition and virus transmission in wild small mammals. | Cell | 2023 |
| 37732272 | Metagenomic analysis of individual mosquitos reveals the ecology of insect viruses. | bioRxiv | 2023 |
| 37679456 | Host phylogeny shapes viral transmission networks in an island ecosystem. | Nat Ecol Evol | 2023 |
| 37289052 | Characterization of an Emergent Chicken H3N8 Influenza Virus in Southern China: a Potential Threat to Public Health. | J Virol | 2023 |
| 37116474 | Zoonotic risk assessment among farmed mammals. | Cell | 2023 |
| 37408458 | Provider perspectives on patient-centredness: participatory formative research and rapid analysis methods to inform the design and implementation of a facility-based HIV care improvement intervention in Zambia. | J Int AIDS Soc | 2023 |
| 37408449 | Patterns of person-centred communications in public HIV clinics: a latent class analysis using the Roter interaction analysis system. | J Int AIDS Soc | 2023 |
| 37112986 | RAPID<i>prep</i>: A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples. | Viruses | 2023 |
| 37407057 | Comparison of patient exit interviews with unannounced standardised patients for assessing HIV service delivery in Zambia: a study nested within a cluster randomised trial. | BMJ Open | 2023 |
| 36974986 | Nonsystematic Reporting Biases of the SARS-CoV-2 Variant Mu Could Impact Our Understanding of the Epidemiological Dynamics of Emerging Variants. | Genome Biol Evol | 2023 |
| 37199627 | Viral Capsid, Antibody, and Receptor Interactions: Experimental Analysis of the Antibody Escape Evolution of Canine Parvovirus. | J Virol | 2023 |
| 37131602 | Rapid epidemic expansion of chikungunya virus-ECSA lineage in Paraguay. | medRxiv | 2023 |
| 37429936 | Individual bat virome analysis reveals co-infection and spillover among bats and virus zoonotic potential. | Nat Commun | 2023 |
| 36786616 | Metatranscriptomic Sequencing Reveals Host Species as an Important Factor Shaping the Mosquito Virome. | Microbiol Spectr | 2023 |
| 36651521 | Through an ecological lens: An ecosystem-based approach to zoonotic risk assessment: An ecosystem-based approach to zoonotic risk assessment. | EMBO Rep | 2023 |
| 36651046 | Strong host phylogenetic and ecological effects on host competency for avian influenza in Australian wild birds. | Proc Biol Sci | 2023 |
| 36841239 | Emergence, continuity, and evolution of Yersinia pestis throughout medieval and early modern Denmark. | Curr Biol | 2023 |
| 36608597 | A novel gyrovirus is abundant in yellow-eyed penguin (Megadyptes antipodes) chicks with a fatal respiratory disease. | Virology | 2023 |
| 36840391 | Trajectories of re-engagement: factors and mechanisms enabling patient return to HIV care in Zambia. | J Int AIDS Soc | 2023 |
| 36711712 | Viral capsid, antibody, and receptor interactions: experimental analysis of the antibody escape evolution of canine parvovirus. | bioRxiv | 2023 |
| 36631833 | Nationwide genomic surveillance reveals the prevalence and evolution of honeybee viruses in China. | Microbiome | 2023 |
| 36863412 | Identification of bovine coronavirus in a Daurian ground squirrel expands the host range of Betacoronavirus 1. | Virol Sin | 2023 |
| 35229003 | Assessment of Coronavirus Disease 2019 Intervention Strategies in the Nordic Countries Using Genomic Epidemiology. | Open Forum Infect Dis | 2022 |
| 37552713 | Molecular Monitoring of SARS-CoV-2 in Different Sewage Plants in Venice and the Implications for Genetic Surveillance. | ACS ES T Water | 2022 |
| 35617977 | Human-to-human transmission of Chlamydia psittaci in China, 2020: an epidemiological and aetiological investigation. | Lancet Microbe | 2022 |
| 35585202 | Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance. | Nat Commun | 2022 |
| 35378755 | Genomic epidemiology reveals the impact of national and international restrictions measures on the SARS-CoV-2 epidemic in Brazil. | medRxiv | 2022 |
| 35704744 | The Ecology of Viral Emergence. | Annu Rev Virol | 2022 |
| 35610217 | Off-season RSV epidemics in Australia after easing of COVID-19 restrictions. | Nat Commun | 2022 |
| 35765950 | The enteric virome of cats with feline panleukopenia differs in abundance and diversity from healthy cats. | Transbound Emerg Dis | 2022 |
| 35538563 | A total infectome approach to understand the etiology of infectious disease in pigs. | Microbiome | 2022 |
| 35795296 | Resolving deep evolutionary relationships within the RNA virus phylum <i>Lenarviricota</i>. | Virus Evol | 2022 |
| 35536868 | Australia as a global sink for the genetic diversity of avian influenza A virus. | PLoS Pathog | 2022 |
| 35371559 | Replacement of the Gamma by the Delta variant in Brazil: Impact of lineage displacement on the ongoing pandemic. | Virus Evol | 2022 |
| 35638822 | Transcriptome Mining Expands Knowledge of RNA Viruses across the Plant Kingdom. | J Virol | 2022 |