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Author Details

Daron M Standley
Osaka university
1998
124
36
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37922454Regulation of lymphoid-myeloid lineage bias through regnase-1/3-mediated control of Nfkbiz.Blood2024
37922454Regulation of lymphoid-myeloid lineage bias through regnase-1/3-mediated control of Nfkbiz.Blood2024
37984375Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I.Genes Cells2024
37984375Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I.Genes Cells2024
36346598Structural Modeling of Adaptive Immune Responses to Infection.Methods Mol Biol2023
36088633Mapping of antibody epitopes based on docking and homology modeling.Proteins2023
36346598Structural Modeling of Adaptive Immune Responses to Infection.Methods Mol Biol2023
37975681Deciphering the antigen specificities of antibodies by clustering their complementarity determining region sequences.mSystems2023
37769257Circadian ribosome profiling reveals a role for the <i>Period2</i> upstream open reading frame in sleep.Proc Natl Acad Sci U S A2023
37024794Intercellular crosstalk in adult dental pulp is mediated by heparin-binding growth factors Pleiotrophin and Midkine.BMC Genomics2023
37188806The ClusPro AbEMap web server for the prediction of antibody epitopes.Nat Protoc2023
37000855Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex.Sci Immunol2023
37442134Expression of the readthrough transcript CiDRE in alveolar macrophages boosts SARS-CoV-2 susceptibility and promotes COVID-19 severity.Immunity2023
37169880Bacterial induction of B cell senescence promotes age-related changes in the gut microbiota.Nat Cell Biol2023
36454183Construction of a T cell receptor signaling range for spontaneous development of autoimmune disease.J Exp Med2023
37975681Deciphering the antigen specificities of antibodies by clustering their complementarity determining region sequences.mSystems2023
37769257Circadian ribosome profiling reveals a role for the <i>Period2</i> upstream open reading frame in sleep.Proc Natl Acad Sci U S A2023
37024794Intercellular crosstalk in adult dental pulp is mediated by heparin-binding growth factors Pleiotrophin and Midkine.BMC Genomics2023
37188806The ClusPro AbEMap web server for the prediction of antibody epitopes.Nat Protoc2023
37442134Expression of the readthrough transcript CiDRE in alveolar macrophages boosts SARS-CoV-2 susceptibility and promotes COVID-19 severity.Immunity2023
37169880Bacterial induction of B cell senescence promotes age-related changes in the gut microbiota.Nat Cell Biol2023
37000855Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex.Sci Immunol2023
36454183Construction of a T cell receptor signaling range for spontaneous development of autoimmune disease.J Exp Med2023
36088633Mapping of antibody epitopes based on docking and homology modeling.Proteins2023
35300461Unbiased integration of single cell transcriptome replicates.NAR Genom Bioinform2022
36039911The protein-stabilizing effects of TMAO in aqueous and non-aqueous conditions.Phys Chem Chem Phys2022
35902282Engineering ACE2 decoy receptors to combat viral escapability.Trends Pharmacol Sci2022
35893479Improved Antibody-Specific Epitope Prediction Using AlphaFold and AbAdapt.Chembiochem2022
36348766Landscape of infection enhancing antibodies in COVID-19 and healthy donors.Comput Struct Biotechnol J2022
36338807Advances in antibody discovery from human BCR repertoires.Front Bioinform2022
35412849Cyclin J-CDK complexes limit innate immune responses by reducing proinflammatory changes in macrophage metabolism.Sci Signal2022
35471044An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo.Sci Transl Med2022
36699363AbAdapt: an adaptive approach to predicting antibody-antigen complex structures from sequence.Bioinform Adv2022
36536641The evolution of structural genomics.Biophys Rev2022
35300461Unbiased integration of single cell transcriptome replicates.NAR Genom Bioinform2022
34997058High cell surface expression and peptide binding affinity of HLA-DQA1*05:03, a susceptible allele of neuromyelitis optica spectrum disorders (NMOSD).Sci Rep2022
35471044An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo.Sci Transl Med2022
35412849Cyclin J-CDK complexes limit innate immune responses by reducing proinflammatory changes in macrophage metabolism.Sci Signal2022
36536641The evolution of structural genomics.Biophys Rev2022
36699363AbAdapt: an adaptive approach to predicting antibody-antigen complex structures from sequence.Bioinform Adv2022
36338807Advances in antibody discovery from human BCR repertoires.Front Bioinform2022
36039911The protein-stabilizing effects of TMAO in aqueous and non-aqueous conditions.Phys Chem Chem Phys2022
35902282Engineering ACE2 decoy receptors to combat viral escapability.Trends Pharmacol Sci2022
35893479Improved Antibody-Specific Epitope Prediction Using AlphaFold and AbAdapt.Chembiochem2022
36348766Landscape of infection enhancing antibodies in COVID-19 and healthy donors.Comput Struct Biotechnol J2022
34997058High cell surface expression and peptide binding affinity of HLA-DQA1*05:03, a susceptible allele of neuromyelitis optica spectrum disorders (NMOSD).Sci Rep2022
33289893Analysis of Protein Intermolecular Interactions with MAFFT-DASH.Methods Mol Biol2021
33888899Antigen-independent activation enhances the efficacy of 4-1BB-costimulated CD22 CAR T cells.Nat Med2021
34035171Hepatitis C virus modulates signal peptide peptidase to alter host protein processing.Proc Natl Acad Sci U S A2021
34139176An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.Cell2021
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Collaborators

Haruki Nakamura
Institute for Protein Research, Osaka University
Co-authored papers 19
Shunsuke Teraguchi
Co-authored papers 16
Shide Liang
Co-authored papers 9
Yuko Tsuchiya
Co-authored papers 6
Jamica Sarmiento
Co-authored papers 5
Dima Kozakov
Stony Brook University
Co-authored papers 5
Sandor Vajda
Boston University
Co-authored papers 5
Eiji Kanamori
Co-authored papers 4
Volker A Eyrich
Columbia University
Co-authored papers 4
Martin Zacharias
Co-authored papers 4
Kengo Kinoshita
Co-authored papers 4
Shoshana J Wodak
VIB-VUB Center for Structural Biology
Co-authored papers 3
Howook Hwang
Co-authored papers 3
Sanbo Qin
University of Illinois at Chicago
Co-authored papers 3
Hasup Lee
Seoul National University
Co-authored papers 3
Jeffrey J Gray
Johns Hopkins University
Co-authored papers 3
Chaok Seok
Seoul National University
Co-authored papers 3
Alexandre M J J Bonvin
Bijvoet Center for Biomolecular Research, Utrecht University
Co-authored papers 3
Sheng-You Huang
Huazhong University of Science and Technology
Co-authored papers 3
Huan-Xiang Zhou
University of Illinois Chicago
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Brian G Pierce
University of Maryland Institute for Bioscience and Biotechnology Research
Co-authored papers 3
Hahnbeom Park
Co-authored papers 3
Thom Vreven
Visterra Inc.
Co-authored papers 3
Xiaoqin Zou
Dalton Cardiovascular Research Center, University of Missouri
Co-authored papers 3
Krishna Praneeth Kilambi
Co-authored papers 3
Julie C Mitchell
Co-authored papers 3
Iain H Moal
GSK Medicines Research Centre
Co-authored papers 3
Dmitri Beglov
Boston University
Co-authored papers 3
Zhiping Weng
University of Massachusetts Medical School
Co-authored papers 3
Panagiotis L Kastritis
Interdisciplinary Research Center HALOmem, Martin Luther University Halle-Wittenberg
Co-authored papers 3
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