Author details

Full Name

Toshiyuki Oda

Affiliation

Graduate School of Medicine, University of Yamanashi

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37398191	Unveiling Liquid-Crystalline Lipids in the Urothelial Membrane through Cryo-EM.	bioRxiv	2023
37398191	Unveiling Liquid-Crystalline Lipids in the Urothelial Membrane through Cryo-EM.	bioRxiv	2023
37519241	Î±- and Î²-tubulin C-terminal tails with distinct modifications are crucial for ciliary motility and assembly.	J Cell Sci	2023
37503277	Unveiling Liquid-Crystalline Lipids in the Urothelial Membrane through Cryo-EM.	Res Sq	2023
37485822	Improving protein structure prediction with extended sequence similarity searches and deep-learning-based refinement in CASP15.	Proteins	2023
37485822	Improving protein structure prediction with extended sequence similarity searches and deep-learning-based refinement in CASP15.	Proteins	2023
37519241	Î±- and Î²-tubulin C-terminal tails with distinct modifications are crucial for ciliary motility and assembly.	J Cell Sci	2023
37503277	Unveiling Liquid-Crystalline Lipids in the Urothelial Membrane through Cryo-EM.	Res Sq	2023
35758632	Cryo-electron tomography of Birbeck granules reveals the molecular mechanism of langerin lattice formation.	Elife	2022
35758632	Cryo-electron tomography of Birbeck granules reveals the molecular mechanism of langerin lattice formation.	Elife	2022
33988244	Chlamydomonas FAP70 is a component of the previously uncharacterized ciliary central apparatus projection C2a.	J Cell Sci	2021
33542099	Neural and behavioral control in <i>Caenorhabditis elegans</i> by a yellow-light-activatable caged compound.	Proc Natl Acad Sci U S A	2021
33988244	Chlamydomonas FAP70 is a component of the previously uncharacterized ciliary central apparatus projection C2a.	J Cell Sci	2021
33542099	Neural and behavioral control in <i>Caenorhabditis elegans</i> by a yellow-light-activatable caged compound.	Proc Natl Acad Sci U S A	2021
32401787	TIM, a targeted insertional mutagenesis method utilizing CRISPR/Cas9 in Chlamydomonas reinhardtii.	PLoS One	2020
31954841	Cryo-EM structures of cardiac thin filaments reveal the 3D architecture of troponin.	J Struct Biol	2020
32401787	TIM, a targeted insertional mutagenesis method utilizing CRISPR/Cas9 in Chlamydomonas reinhardtii.	PLoS One	2020
33067529	Cryo-electron tomography of cardiac myofibrils reveals a 3D lattice spring within the Z-discs.	Commun Biol	2020
31954841	Cryo-EM structures of cardiac thin filaments reveal the 3D architecture of troponin.	J Struct Biol	2020
33067529	Cryo-electron tomography of cardiac myofibrils reveals a 3D lattice spring within the Z-discs.	Commun Biol	2020
30364995	Chlamydomonas as a tool to study tubulin polyglutamylation.	Microscopy (Oxf)	2019
30448927	Interactions between mitochondria and endoplasmic reticulum in demyelinated axons.	Med Mol Morphol	2019
30364995	Chlamydomonas as a tool to study tubulin polyglutamylation.	Microscopy (Oxf)	2019
31455732	Disease-associated mutations hyperactivate KIF1A motility and anterograde axonal transport of synaptic vesicle precursors.	Proc Natl Acad Sci U S A	2019
31455732	Disease-associated mutations hyperactivate KIF1A motility and anterograde axonal transport of synaptic vesicle precursors.	Proc Natl Acad Sci U S A	2019
30448927	Interactions between mitochondria and endoplasmic reticulum in demyelinated axons.	Med Mol Morphol	2019
29178285	Template-based quaternary structure prediction of proteins using enhanced profile-profile alignments.	Proteins	2018
30158508	CFAP70 Is a Novel Axoneme-Binding Protein That Localizes at the Base of the Outer Dynein Arm and Regulates Ciliary Motility.	Cells	2018
29178285	Template-based quaternary structure prediction of proteins using enhanced profile-profile alignments.	Proteins	2018
29741156	Systematic studies of all PIH proteins in zebrafish reveal their distinct roles in axonemal dynein assembly.	Elife	2018
29540525	A microtubule-dynein tethering complex regulates the axonemal inner dynein f (I1).	Mol Biol Cell	2018
29796936	Decreased number and increased volume with mitochondrial enlargement of cerebellar synaptic terminals in a mouse model of chronic demyelination.	Med Mol Morphol	2018
30158508	CFAP70 Is a Novel Axoneme-Binding Protein That Localizes at the Base of the Outer Dynein Arm and Regulates Ciliary Motility.	Cells	2018
29540525	A microtubule-dynein tethering complex regulates the axonemal inner dynein f (I1).	Mol Biol Cell	2018
29741156	Systematic studies of all PIH proteins in zebrafish reveal their distinct roles in axonemal dynein assembly.	Elife	2018
29796936	Decreased number and increased volume with mitochondrial enlargement of cerebellar synaptic terminals in a mouse model of chronic demyelination.	Med Mol Morphol	2018
28578660	Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance.	BMC Bioinformatics	2017
28637765	Electrostatic interaction between polyglutamylated tubulin and the nexin-dynein regulatory complex regulates flagellar motility.	Mol Biol Cell	2017
28541401	Three-dimensional structural labeling microscopy of cilia and flagella.	Microscopy (Oxf)	2017
28369657	Origin and Evolutionary Alteration of the Mitochondrial Import System in Eukaryotic Lineages.	Mol Biol Evol	2017
28578660	Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance.	BMC Bioinformatics	2017
28369657	Origin and Evolutionary Alteration of the Mitochondrial Import System in Eukaryotic Lineages.	Mol Biol Evol	2017
28541401	Three-dimensional structural labeling microscopy of cilia and flagella.	Microscopy (Oxf)	2017
28637765	Electrostatic interaction between polyglutamylated tubulin and the nexin-dynein regulatory complex regulates flagellar motility.	Mol Biol Cell	2017
26864626	Structure and function of outer dynein arm intermediate and light chain complex.	Mol Biol Cell	2016
26933181	Docking-complex-independent alignment of Chlamydomonas outer dynein arms with 24-nm periodicity in vitro.	J Cell Sci	2016
26792249	Screening and discovery of lineage-specific mitosomal membrane proteins in Entamoeba histolytica.	Mol Biochem Parasitol	2016
26864626	Structure and function of outer dynein arm intermediate and light chain complex.	Mol Biol Cell	2016
27122118	Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.	Proteins	2016
27122118	Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.	Proteins	2016

1 - 50 of 82

Christna Ouch

Boston University School of Medicine, University of Massachusetts Medical School

Career Start Year 2014

Number of shared co-authors 1

Kangkang Song

University of Massachusetts Chan Medical School

Career Start Year 2011

Number of shared co-authors 1

Dhivya Kumar

Cardiovascular Research Institute, University of California san francisco

Career Start Year 2011

Number of shared co-authors 0

Christopher H S Aylett

Imperial College London

Career Start Year 2010

Number of shared co-authors 1

Shenping Wu

Yale University

Career Start Year 2006

Number of shared co-authors 1

Chanjae Lee

University of Texas

Career Start Year 2006

Number of shared co-authors 0

Zoltan Metlagel

Lawrence Berkeley National Laboratory, University of California

Career Start Year 2006

Number of shared co-authors 0

Elizabeth Villa

University of California San Diego, USA Howard Hughes Medical Institute

Career Start Year 2005

Number of shared co-authors 1

Zhiheng Yu

Howard Hughes Medical Institute

Career Start Year 2004

Number of shared co-authors 1

Martin Beck

Max Planck Institute of Biophysics

Career Start Year 2004

Number of shared co-authors 1

Ge Yang

College of Chemistry, Sichuan University

Career Start Year 2003

Number of shared co-authors 0

Yao Cong

University of Chinese Academy of Sciences

Career Start Year 2003

Number of shared co-authors 1

Wei Dai

Yuecheng District Centers for Disease Control and Prevention

Career Start Year 2003

Number of shared co-authors 1

Gabriel C Lander

The Scripps Research Institute

Career Start Year 2003

Number of shared co-authors 1

Sam Li

University of California San Francisco

Career Start Year 2003

Number of shared co-authors 1

Jay R Unruh

Stowers Institute for Medical Research

Career Start Year 2003

Number of shared co-authors 1

Calvin K Yip

The University of British Columbia

Career Start Year 2002

Number of shared co-authors 1

Adam Frost

University of California San Francisco

Career Start Year 2002

Number of shared co-authors 1

Scott M Stagg

Florida State University

Career Start Year 2000

Number of shared co-authors 2

Ohad Medalia

University of Zurich

Career Start Year 1997

Number of shared co-authors 2

Stefan Geimer

Universitat Bayreuth

Career Start Year 1997

Number of shared co-authors 0

Yifan Cheng

Quantitative Bioscience Institute, University of California san francisco

Career Start Year 1997

Number of shared co-authors 3

Grant J Jensen

California Institute of Technology, Brigham Young University

Career Start Year 1994

Number of shared co-authors 1

Lotte B Pedersen

University of Copenhagen

Career Start Year 1993

Number of shared co-authors 0

Robyn Roth

Washington University School of Medicine

Career Start Year 1993

Number of shared co-authors 0

Henning Stahlberg

Ecole Polytechnique Federale de Lausanne (EPFL), University of Lausanne

Career Start Year 1988

Number of shared co-authors 1

William J Rice

New York University Grossman School of Medicine

Career Start Year 1985

Number of shared co-authors 1

Kenneth H Downing

Lawrence Berkeley National Laboratory

Career Start Year 1980

Number of shared co-authors 1

Edward H Egelman

University of Virginia

Career Start Year 1979

Number of shared co-authors 1

Paul Matsudaira

Center for BioImaging Sciences (CBIS), National University of Singapore

Career Start Year 1978

Number of shared co-authors 1

row(s) 1 - 30 of 30

Kentaro Tomii

National Institute of Advanced Industrial Science and Technology (AIST)

Co-authored papers 4

Kenichiro Imai

Cellular and Molecular Biotechnology Research Institute

Co-authored papers 3

Tsukasa Nakamura

Purdue University

Co-authored papers 2

Zhiping Weng

University of Massachusetts Medical School

Co-authored papers 1

Xiaofeng Yu

Deqing Hospital of Traditional Chinese Medicine

Co-authored papers 1

Shoshana J Wodak

VIB-VUB Center for Structural Biology

Co-authored papers 1

Tyler Borrman

University of Massachusetts Medical School

Co-authored papers 1

Panagiotis L Kastritis

Interdisciplinary Research Center HALOmem, Martin Luther University Halle-Wittenberg

Co-authored papers 1

Jilong Li

Qiagen Inc.

Co-authored papers 1

Keehyoung Joo

Center for Advanced Computation, Korea Institute for Advanced Study

Co-authored papers 1

Ivan Anishchenko

University of Washington

Co-authored papers 1

Petras J Kundrotas

The University of Kansas

Co-authored papers 1

Eiichiro Ichiishi

International University of Health and Welfare (IUHV Hospital)

Co-authored papers 1

Anisah W Ghoorah

University of Mauritius

Co-authored papers 1

Neil J Bruce

Heidelberg Institute for Theoretical Studies (HITS)

Co-authored papers 1

Zhiwei Ma

Dalton Cardiovascular Research Center, University of Missouri

Co-authored papers 1

Dmitri Beglov

Boston University

Co-authored papers 1

Liming Qiu

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 1

Artem B Mamonov

MGH/Harvard Medical School

Co-authored papers 1

Brian Jim??nez-Garc??a

Utrecht University

Co-authored papers 1

Iain H Moal

GSK Medicines Research Centre

Co-authored papers 1

Rebecca C Wade

Center for Molecular Biology (ZMBH), Heidelberg University

Co-authored papers 1

Jooyoung Lee

Korea Institute for Advanced Study

Co-authored papers 1

Bernard Maigret

Universite de Lorraine, CNRS

Co-authored papers 1

Gydo C P van Zundert

Utrecht University

Co-authored papers 1

Li C Xue

Utrecht University

Co-authored papers 1

Xiaoqin Zou

Dalton Cardiovascular Research Center, University of Missouri

Co-authored papers 1

Ilya A Vakser

The University of Kansas

Co-authored papers 1

Lenna X Peterson

Purdue University

Co-authored papers 1

Mehdi Nellen

Utrecht University

Co-authored papers 1

1 - 30

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