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Author Details

Chinnappa D Kodira
GE Global Research Center
1999
46
40
PMIDPaper TitleJournal TitlePublished Year
33911285Meningeal lymphatics affect microglia responses and anti-Aβ immunotherapy.Nature2021
30949446Leveraging Spatial Variation in Tumor Purity for Improved Somatic Variant Calling of Archival Tumor Only Samples.Front Oncol2019
29494600Computational de novo discovery of distinguishing genes for biological processes and cell types in complex tissues.PLoS One2018
28751397Genome Sequence of <i>Ophidiomyces ophiodiicola</i>, an Emerging Fungal Pathogen of Snakes.Genome Announc2017
24908277Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.Nat Biotechnol2014
24995004Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity.Front Microbiol2014
24743168Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation.PLoS Genet2014
23316438Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence.G3 (Bethesda)2013
23825666Evolutionary dynamics of the accessory genome of Listeria monocytogenes.PLoS One2013
22396667Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides.PLoS Genet2012
22722832The bonobo genome compared with the chimpanzee and human genomes.Nature2012
22523606The Cassava Genome: Current Progress, Future Directions.Trop Plant Biol2012
21186353The genome of woodland strawberry (Fragaria vesca).Nat Genet2011
22046142Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis.PLoS Genet2011
21931557Comparative and functional genomics of Rhodococcus opacus PD630 for biofuels development.PLoS Genet2011
21876677Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.PLoS Genet2011
21536894Obligate biotrophy features unraveled by the genomic analysis of rust fungi.Proc Natl Acad Sci U S A2011
21693181Directed sequencing and annotation of three Dicentrarchus labrax L. chromosomes by applying Sanger- and pyrosequencing technologies on pooled DNA of comparatively mapped BAC clones.Genomics2011
20237561Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.Nature2010
20802477The genome of the domesticated apple (Malus ÿ domestica Borkh.).Nat Genet2010
20950470Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.).BMC Genomics2010
20929811Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens.Science2010
20929810Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics.Science2010
20489017A catalog of reference genomes from the human microbiome.Science2010
20547848Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).Proc Natl Acad Sci U S A2010
20140207Analysis of high-throughput sequencing and annotation strategies for phage genomes.PLoS One2010
19478886Comparative genomic characterization of Francisella tularensis strains belonging to low and high virulence subspecies.PLoS Pathog2009
19578406Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication.PLoS Genet2009
19815760Genomics. Genome project standards in a new era of sequencing.Science2009
19717792Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives.Genome Res2009
19741609Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.Nature2009
19465905Evolution of pathogenicity and sexual reproduction in eight Candida genomes.Nature2009
18416670Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation.OMICS2008
19026009Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment-naïve patients.Hepatology2008
18287045Dynamics of Pseudomonas aeruginosa genome evolution.Proc Natl Acad Sci U S A2008
17510324Genome sequence of Aedes aegypti, a major arbovirus vector.Science2007
18024570Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum.Plant Cell2007
16572171Analysis of the DNA sequence and duplication history of human chromosome 15.Nature2006
16421571DNA sequence and analysis of human chromosome 8.Nature2006
16177791DNA sequence and analysis of human chromosome 18.Nature2005
15289470The complete genome and proteome of Mycoplasma mobile.Genome Res2004
12040188A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.Science2002
12364791The genome sequence of the malaria mosquito Anopheles gambiae.Science2002
11181995The sequence of the human genome.Science2001
10731132The genome sequence of Drosophila melanogaster.Science2000
9847136The Genome Sequence DataBase: towards an integrated functional genomics resource.Nucleic Acids Res1999
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Collaborators

Bruce W Birren
Broad Institute of MIT and Harvard
Co-authored papers 21
Chad Nusbaum
Co-authored papers 9
Jennifer R Wortman
Broad Institute of MIT and Harvard
Co-authored papers 9
Manfred Grabherr
Co-authored papers 6
Brian J Haas
Broad Institute of MIT and Harvard
Co-authored papers 6
David DeCaprio
Broad Institute of Harvard and MIT
Co-authored papers 5
Granger G Sutton
J. Craig Venter Institute
Co-authored papers 5
Steven L Salzberg
Center for Computational Biology, Johns Hopkins University
Co-authored papers 5
Arthur L Delcher
Center for Computational Biology, Johns Hopkins School of Medicine
Co-authored papers 5
Qi Zhao
Yunnan Institute of Tropical Crops
Co-authored papers 5
Michael Koehrsen
The Broad Institute
Co-authored papers 5
Evgeny M Zdobnov
University of Geneva
Co-authored papers 4
J C Venter
The J. Craig Venter Institute
Co-authored papers 4
Alexander A Levitsky
Co-authored papers 4
Michael C Zody
Broad Institute of Harvard and MIT
Co-authored papers 4
Renee Strong
Co-authored papers 4
Tina C McIntosh
Co-authored papers 4
Peter Arensburger
California State Polytechnic University
Co-authored papers 4
Zhiping Gu
Xuzhou Kuangshan Hospital
Co-authored papers 4
Peng Guan
College of Veterinary Medicine, Sichuan Agricultural University
Co-authored papers 4
Zhaoxi Ke
Beijing University of Chinese Medicine
Co-authored papers 4
Roderic Guigó
Co-authored papers 4
Peter W Atkinson
University of California riverside
Co-authored papers 4
Thomas Smith
Flinders Medical Centre
Co-authored papers 4
Clark Mobarry
Co-authored papers 4
Cheryl L Kraft
Co-authored papers 4
Karin A Remington
The J. Craig Venter Institute.
Co-authored papers 4
Cynthia Andrews-Pfannkoch
Mayo Clinic
Co-authored papers 4
Mark Yandell
University of Utah
Co-authored papers 4
Zhongwu Lai
Oncology R&D
Co-authored papers 4
Release 1.2