Author details

Full Name

Christopher S Smillie

Affiliation

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37443254	Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases.	Nat Genet	2023
36708705	Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states.		2023
34780721	An Integrated Taxonomy for Monogenic Inflammatory Bowel Disease.	Gastroenterology	2022
34957435	GWAS of stool frequency provides insights into gastrointestinal motility and irritable bowel syndrome.	Cell Genom	2021
33969320	Longitudinal proteomic analysis of severe COVID-19 reveals survival-associated signatures, tissue-specific cell death, and cell-cell interactions.	Cell Rep Med	2021
33737460	Î³Î´ T cells regulate the intestinal response to nutrient sensing.	Science	2021
33654293	Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.	Nat Med	2021
34450029	Spatially organized multicellular immune hubs in human colorectal cancer.	Cell	2021
32888429	The Human and Mouse Enteric Nervous System at Single-Cell Resolution.	Cell	2020
32514119	Genome and sequence determinants governing the expression of horizontally acquired DNA in bacteria.	ISME J	2020
33173871	Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients.	bioRxiv	2020
29447696	Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation.	Cell Host Microbe	2018
30392957	T Helper Cell Cytokines Modulate Intestinal Stem Cell Renewal and Differentiation.	Cell	2018
30052624	Metagenomic mining of regulatory elements enables programmable species-selective gene expression.	Nat Methods	2018
28230052	Unraveling the processes shaping mammalian gut microbiomes over evolutionary time.	Nat Commun	2017
28329759	Corrigendum: Mobile genes in the human microbiome are structured from global to individual scales.	Nature	2017
29144463	A single-cell survey of the small intestinal epithelium.	Nature	2017
28222117	Two dynamic regimes in the human gut microbiome.	PLoS Comput Biol	2017
27573121	The Microbial Olympics 2016.	Nat Microbiol	2016
27409808	Mobile genes in the human microbiome are structured from global to individual scales.	Nature	2016
25968645	Natural bacterial communities serve as quantitative geochemical biosensors.	mBio	2015
23342023	Probiotic bacteria induce a 'glow of health'.	PLoS One	2013
23874682	Microbial reprogramming inhibits Western diet-associated obesity.	PLoS One	2013
22768065	Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.	PLoS One	2012
22037308	Ecology drives a global network of gene exchange connecting the human microbiome.	Nature	2011
19897643	Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome.	Journal of Bacteriology	2010
20805406	Mobility of plasmids.	Microbiology and Molecular Biology Reviews	2010
17350934	Gene decay in archaea.	Archaea	2007