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Author Details

Zhiyong Lu
National Center for Biotechnology Information, National Institutes of Health.
2005
172
52
Ying Ding (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37576126Matching Patients to Clinical Trials with Large Language Models.ArXiv2024
37576126Matching Patients to Clinical Trials with Large Language Models.ArXiv2024
36350613LitCovid in 2022: an information resource for the COVID-19 literature.Nucleic Acids Res2023
36370100Database resources of the National Center for Biotechnology Information in 2023.Nucleic Acids Res2023
36350613LitCovid in 2022: an information resource for the COVID-19 literature.Nucleic Acids Res2023
38001031Term-BLAST-like alignment tool for concept recognition in noisy clinical texts.Bioinformatics2023
37878810GNorm2: an improved gene name recognition and normalization system.Bioinformatics2023
37205266LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search.ArXiv2023
36882099Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VII.Database (Oxford)2023
37254254Retrieve, Summarize, and Verify: How Will ChatGPT Affect Information Seeking from the Medical Literature?J Am Soc Nephrol2023
36471749Comprehensively identifying Long Covid articles with human-in-the-loop machine learning.Patterns (N Y)2023
37171899AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning.Bioinformatics2023
38001031Term-BLAST-like alignment tool for concept recognition in noisy clinical texts.Bioinformatics2023
37878810GNorm2: an improved gene name recognition and normalization system.Bioinformatics2023
37254254Retrieve, Summarize, and Verify: How Will ChatGPT Affect Information Seeking from the Medical Literature?J Am Soc Nephrol2023
37171899AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning.Bioinformatics2023
37205266LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search.ArXiv2023
36882099Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VII.Database (Oxford)2023
36471749Comprehensively identifying Long Covid articles with human-in-the-loop machine learning.Patterns (N Y)2023
36370100Database resources of the National Center for Biotechnology Information in 2023.Nucleic Acids Res2023
35051899Global-Local attention network with multi-task uncertainty loss for abnormal lymph node detection in MR images.Med Image Anal2022
35904569tmVar 3.0: an improved variant concept recognition and normalization tool.Bioinformatics2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
36227127Assigning species information to corresponding genes by a sequence labeling framework.Database (Oxford)2022
36152950Towards a unified search: Improving PubMed retrieval with full text.J Biomed Inform2022
35623021Machine Learning Approach to Facilitate Knowledge Synthesis at the Intersection of Liver Cancer, Epidemiology, and Health Disparities Research.JCO Clin Cancer Inform2022
36128510Radiology Text Analysis System (RadText): Architecture and Evaluation.IEEE Int Conf Healthc Inform2022
35856889A sequence labeling framework for extracting drug-protein relations from biomedical literature.Database (Oxford)2022
35536809LitMC-BERT: Transformer-Based Multi-Label Classification of Biomedical Literature With An Application on COVID-19 Literature Curation.IEEE/ACM Trans Comput Biol Bioinform2022
35351638PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology.J Biomed Inform2022
35849818BioRED: a rich biomedical relation extraction dataset.Brief Bioinform2022
36458799NLM-Chem-BC7: manually annotated full-text resources for chemical entity annotation and indexing in biomedical articles.Database (Oxford)2022
34850941Database resources of the national center for biotechnology information.Nucleic Acids Res2022
35051899Global-Local attention network with multi-task uncertainty loss for abnormal lymph node detection in MR images.Med Image Anal2022
35351638PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology.J Biomed Inform2022
35536809LitMC-BERT: Transformer-Based Multi-Label Classification of Biomedical Literature With An Application on COVID-19 Literature Curation.IEEE/ACM Trans Comput Biol Bioinform2022
35856889A sequence labeling framework for extracting drug-protein relations from biomedical literature.Database (Oxford)2022
35623021Machine Learning Approach to Facilitate Knowledge Synthesis at the Intersection of Liver Cancer, Epidemiology, and Health Disparities Research.JCO Clin Cancer Inform2022
35849818BioRED: a rich biomedical relation extraction dataset.Brief Bioinform2022
36458799NLM-Chem-BC7: manually annotated full-text resources for chemical entity annotation and indexing in biomedical articles.Database (Oxford)2022
35904569tmVar 3.0: an improved variant concept recognition and normalization tool.Bioinformatics2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
36128510Radiology Text Analysis System (RadText): Architecture and Evaluation.IEEE Int Conf Healthc Inform2022
36227127Assigning species information to corresponding genes by a sequence labeling framework.Database (Oxford)2022
36152950Towards a unified search: Improving PubMed retrieval with full text.J Biomed Inform2022
34850941Database resources of the national center for biotechnology information.Nucleic Acids Res2022
32422651Recent advances in biomedical literature mining.Brief Bioinform2021
36247813Improving Interpretability in Machine Diagnosis: Detection of Geographic Atrophy in OCT Scans.Ophthalmol Sci2021
32422651Recent advances in biomedical literature mining.Brief Bioinform2021
33792724Multimodal, multitask, multiattention (M3) deep learning detection of reticular pseudodrusen: Toward automated and accessible classification of age-related macular degeneration.J Am Med Inform Assoc2021
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Collaborators

National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 46
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Co-authored papers 28
National Institutes of Health
Co-authored papers 25
Co-authored papers 18
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 18
Co-authored papers 14
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University of Colorado Denver
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University of Delaware
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Co-authored papers 9
Institute of Medical Information, Chinese Academy of Medical Sciences
Co-authored papers 9
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 9
The MITRE Corporation
Co-authored papers 8
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 8
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Spanish National Cancer Research Centre
Co-authored papers 8
Georgetown University Medical Center
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National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 8
University of Colorado School of Medicine
Co-authored papers 7
National Eye Institute, National Institutes of Health
Co-authored papers 7
Co-authored papers 7
National Eye Institute, National Institutes of Health
Co-authored papers 7
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 6
Division of Epidemiology and Clinical Applications, National Eye Institute
Co-authored papers 6
Josep Carreras Leukaemia Research Institute (IJC)
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National Eye Institute
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National Institutes of Health (NIH) Clinical Center
Co-authored papers 5
National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre
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