Author details

Full Name

Trent R Northen

Affiliation

ORCID

Career Start Year

2005

Papers

171

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37422438	Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine.	Metallomics	2023
36435200	Rapid quantification of alcohol production in microorganisms based on nanostructure-initiator mass spectrometry (NIMS).	Anal Biochem	2023
36448874	Substrate availability and not thermal acclimation controls microbial temperature sensitivity response to long-term warming.	Glob Chang Biol	2023
37668195	Conservation of beneficial microbes between the rhizosphere and the cyanosphere.		2023
37596301	BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring.		2023
37418444	Alkaline-SDS cell lysis of microbes with acetone protein precipitation for proteomic sample preparation in 96-well plate format.	PLoS One	2023
37402642	Quantitative Analysis of The High-Yield Hydrolysis of Kelp by Laminarinase and Alginate Lyase.		2023
37401915	A combinatorial droplet microfluidic device integrated with mass spectrometry for enzyme screening.	Lab Chip	2023
37280433	Fine scale sampling reveals early differentiation of rhizosphere microbiome from bulk soil in young Brachypodium plant roots.	ISME Commun	2023
36964135	The core metabolome and root exudation dynamics of three phylogenetically distinct plant species.		2023
37138074	Complete integration of carbene-transfer chemistry into biosynthesis.	Nature	2023
36702250	Mass spectrometry imaging-based assays for aminotransferase activity reveal a broad substrate spectrum for a previously uncharacterized enzyme.		2023
37312139	Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium.		2023
37057992	Expanding Extender Substrate Selection for Unnatural Polyketide Biosynthesis by Acyltransferase Domain Exchange within a Modular Polyketide Synthase.	J Am Chem Soc	2023
37434715	BONCAT-FACS-Seq reveals the active fraction of a biocrust community undergoing a wet-up event.		2023
37307452	Decomposition decreases molecular diversity and ecosystem similarity of soil organic matter.		2023
37301990	Dynamic Phaeodactylum tricornutum exometabolites shape surrounding bacterial communities.		2023
36993560	Cysteine: an ancestral Cu binding ligand in green algae?	bioRxiv	2023
37041326	Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past.		2023
35087223	Small partners, big impacts.	Nature Reviews Microbiology	2022
35523965	SIMILE enables alignment of tandem mass spectra with statistical significance.	Nat Commun	2022
35512445	N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon.	Journal of Experimental Botany	2022
36300927	Tracing Carbon Metabolism with Stable Isotope Metabolomics Reveals the Legacy of Diverse Carbon Sources in Soil.	Applied and Environmental Microbiology	2022
35756023	Substrate Utilization and Competitive Interactions Among Soil Bacteria Vary With Life-History Strategies.	Frontiers in Microbiology	2022
35694313	A Defined Medium for Cultivation and Exometabolite Profiling of Soil Bacteria.	Front Microbiol	2022
35501481	A sweet spot in marine ecosystems.	Nature Ecology and Evolution	2022
36280858	Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction.	Microbiome	2022
36266335	Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.	Nat Microbiol	2022
36188638	Engineering sorghum for higher 4-hydroxybenzoic acid content.	Metab Eng Commun	2022
37938263	Protist impacts on marine cyanovirocell metabolism.	ISME Commun	2022
36472419	A Reproducible and Tunable Synthetic Soil Microbial Community Provides New Insights into Microbial Ecology.	mSystems	2022
34797921	Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes.	New Phytologist	2022
34862502	GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.	Nat Methods	2022
34508657	CRAGE-CRISPR facilitates rapid activation of secondary metabolite biosynthetic gene clusters in bacteria.	Cell Chemical Biology	2022
34845335	Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism.	ISME J	2022
34890798	Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE.	Metab Eng	2022
34360661	Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant-Microbe Interactions.	Int J Mol Sci	2021
34129999	Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience.	Current Opinion in Biotechnology	2021
34017316	Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of <i>Thermoflexus hugenholtzii</i> and Three Candidate Species From China and Japan.	Front Microbiol	2021
33906945	Anaerobic gut fungi are an untapped reservoir of natural products.	Proc Natl Acad Sci U S A	2021
33841353	Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions.	Front Microbiol	2021
33881913	Metabolomic Patterns of Septoria Canker Resistant and Susceptible Genotypes 24 Hours Postinoculation.	Phytopathology	2021
33927199	Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.	Nat Commun	2021
33926536	Experimental and theoretical insights into the effects of pH on catalysis of bond-cleavage by the lignin peroxidase isozyme H8 from Phanerochaete chrysosporium.	Biotechnol Biofuels	2021
33712730	A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology.	Commun Biol	2021
34083602	A multiplexed nanostructure-initiator mass spectrometry (NIMS) assay for simultaneously detecting glycosyl hydrolase and lignin modifying enzyme activities.	Sci Rep	2021
33398188	Reply to: Examining microbe-metabolite correlations by linear methods.	Nat Methods	2021
33431904	Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays).	Scientific Reports	2021
34795375	Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics.	Commun Biol	2021
34399620	Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship.	mBio	2021