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Author Details

Andrej Sali (CM4AI)
University of California San Francisco
0000-0003-0435-6197
1985
583
138
Tools, structural biology
PMIDPaper TitleJournal TitlePublished Year
37503298Nanobody repertoire generated against the spike protein of ancestral SARS-CoV-2 remains efficacious against the rapidly evolving virus.bioRxiv2024
37503298Nanobody repertoire generated against the spike protein of ancestral SARS-CoV-2 remains efficacious against the rapidly evolving virus.bioRxiv2024
35298864Integrative structure determination of histones H3 and H4 using genetic interactions.FEBS J2023
36420884RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning.Nucleic Acids Res2023
37738963Implications of a multiscale structure of the yeast nuclear pore complex.Mol Cell2023
37961561Multi-scale photocatalytic proximity labeling reveals cell surface neighbors on and between cells.bioRxiv2023
37613466Soft X-ray Tomography for Mapping and Quantifying Intracellular Organelle Interactions.Microsc Microanal2023
37609337Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates.bioRxiv2023
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
37066338Dynamic molecular mechanism of the nuclear pore complex permeability barrier.bioRxiv2023
37066286In situ structure of actin remodeling during glucose-stimulated insulin secretion using cryo-electron tomography.Res Sq2023
37252352Conformational Dynamics of the Activated GLP-1 Receptor-G<sub>s</sub> Complex Revealed by Cross-Linking Mass Spectrometry and Integrative Structure Modeling.ACS Cent Sci2023
36747776Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.bioRxiv2023
36599981A quantitative map of nuclear pore assembly reveals two distinct mechanisms.Nature2023
36782050Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.Nat Struct Mol Biol2023
35298864Integrative structure determination of histones H3 and H4 using genetic interactions.FEBS J2023
37961561Multi-scale photocatalytic proximity labeling reveals cell surface neighbors on and between cells.bioRxiv2023
37613466Soft X-ray Tomography for Mapping and Quantifying Intracellular Organelle Interactions.Microsc Microanal2023
37738963Implications of a multiscale structure of the yeast nuclear pore complex.Mol Cell2023
37609337Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates.bioRxiv2023
37252352Conformational Dynamics of the Activated GLP-1 Receptor-G<sub>s</sub> Complex Revealed by Cross-Linking Mass Spectrometry and Integrative Structure Modeling.ACS Cent Sci2023
37066338Dynamic molecular mechanism of the nuclear pore complex permeability barrier.bioRxiv2023
37066286In situ structure of actin remodeling during glucose-stimulated insulin secretion using cryo-electron tomography.Res Sq2023
36782050Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.Nat Struct Mol Biol2023
36747776Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.bioRxiv2023
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
36420884RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning.Nucleic Acids Res2023
36599981A quantitative map of nuclear pore assembly reveals two distinct mechanisms.Nature2023
34676613RCSB Protein Data Bank: Celebrating 50â¿¿years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D.Protein Sci2022
36048824An intensity-based post-processing tool for 3D instance segmentation of organelles in soft X-ray tomograms.PLoS One2022
36291635Protein Data Bank: A Comprehensive Review of 3D Structure Holdings and Worldwide Utilization by Researchers, Educators, and Students.Biomolecules2022
35485925Doublecortin engages the microtubule lattice through a cooperative binding mode involving its C-terminal domain.Elife2022
35921440Quantitative, in situ visualization of intracellular insulin vesicles in pancreatic beta cells.Proc Natl Acad Sci U S A2022
36474933Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future.Biophys Rev2022
34982960Comprehensive structure and functional adaptations of the yeast nuclear pore complex.Cell2022
34676613RCSB Protein Data Bank: Celebrating 50â¿¿years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D.Protein Sci2022
35264557The YΦ motif defines the structure-activity relationships of human 20S proteasome activators.Nat Commun2022
35149213Integration of software tools for integrative modeling of biomolecular systems.J Struct Biol2022
35148829Soft X-ray tomography to map and quantify organelle interactions at the mesoscale.Structure2022
35013567From systems to structure - using genetic data to model protein structures.Nat Rev Genet2022
35082148Soluble TREM2 inhibits secondary nucleation of Aβ fibrillization and enhances cellular uptake of fibrillar Aβ.Proc Natl Acad Sci U S A2022
35324950Auto-segmentation and time-dependent systematic analysis of mesoscale cellular structure in β-cells during insulin secretion.PLoS One2022
35485925Doublecortin engages the microtubule lattice through a cooperative binding mode involving its C-terminal domain.Elife2022
36474933Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future.Biophys Rev2022
35921440Quantitative, in situ visualization of intracellular insulin vesicles in pancreatic beta cells.Proc Natl Acad Sci U S A2022
36291635Protein Data Bank: A Comprehensive Review of 3D Structure Holdings and Worldwide Utilization by Researchers, Educators, and Students.Biomolecules2022
36048824An intensity-based post-processing tool for 3D instance segmentation of organelles in soft X-ray tomograms.PLoS One2022
34982960Comprehensive structure and functional adaptations of the yeast nuclear pore complex.Cell2022
35013567From systems to structure - using genetic data to model protein structures.Nat Rev Genet2022
35149213Integration of software tools for integrative modeling of biomolecular systems.J Struct Biol2022
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Collaborators

University of California san francisco
Co-authored papers 44
University of California san francisco
Co-authored papers 41
University of California at San Francisco
Co-authored papers 33
Universitat Pompeu Fabra (UPF)
Co-authored papers 33
The Rockefeller University
Co-authored papers 32
The Hebrew University of Jerusalem
Co-authored papers 31
The State University of New Jersey
Co-authored papers 29
The Rockefeller University
Co-authored papers 26
Korea Advanced Institute of Science and Technology (KAIST)
Co-authored papers 25
Indian Institute of Science Education and Research Pune
Co-authored papers 22
Albert Einstein College of Medicine
Co-authored papers 21
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Co-authored papers 21
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai
Co-authored papers 19
University of California San Francisco
Co-authored papers 18
The Scripps Research Institute
Co-authored papers 18
College of Biotechnology and Bioengineering, Zhejiang University of Technology
Co-authored papers 17
University of California san francisco
Co-authored papers 16
Albert Einstein College of Medicine
Co-authored papers 16
Verily Life Sciences LLC
Co-authored papers 16
The State University of New Jersey
Co-authored papers 16
The Rockefeller University
Co-authored papers 15
University of California San Francisco
Co-authored papers 15
Department of Pharmaceutical Chemistry, University of California san francisco
Co-authored papers 14
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai
Co-authored papers 14
Heartand Lung Research Institute, University of Cambridge
Co-authored papers 14
Albert Einstein College of Medicine
Co-authored papers 13
University of California San Francisco
Co-authored papers 13
The State University of New Jersey
Co-authored papers 13
Leibniz-Institut fur Virologie (LIV)
Co-authored papers 13
University of California san francisco
Co-authored papers 13