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Author Details

Michael C Fontaine
University Montpellier, CNRS
2007
47
19
PMIDPaper TitleJournal TitlePublished Year
36125236Microbiome composition is shaped by geography and population structure in the parasitic wasp Asobara japonica, but not in the presence of the endosymbiont Wolbachia.Mol Ecol2023
37577945A comparison of genomic diversity and demographic history of the North Atlantic and Southwest Atlantic southern right whales.Mol Ecol2023
38089896Harbor porpoise losing its edge: Genetic time series suggests a rapid population decline in Iberian waters over the last 30â¿¿years.Ecol Evol2023
37463880Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters.Nat Commun2023
37030000Population Genomic Evidence of Adaptive Response during the Invasion History of Plasmodium falciparum in the Americas.Mol Biol Evol2023
36881629Standing genetic variation and chromosome differences drove rapid ecotype formation in a major malaria mosquito.Proc Natl Acad Sci U S A2023
36941409Models based on best-available information support a low inbreeding load and potential for recovery in the vaquita.Heredity (Edinb)2023
35106871Global flyway evolution in red knots Calidris canutus and genetic evidence for a Nearctic refugium.Mol Ecol2022
35511971The critically endangered vaquita is not doomed to extinction by inbreeding depression.Science2022
34178106No leading-edge effect in North Atlantic harbor porpoises: Evolutionary and conservation implications.Evol Appl2021
34705499Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins.Sci Adv2021
34594514Predator biomass and vegetation influence the coastal distribution of threespine stickleback morphotypes.Ecol Evol2021
32938978Mitochondrial genomics reveals the evolutionary history of the porpoises (Phocoenidae) across the speciation continuum.Sci Rep2020
31772318Genetic homogeneity in the face of morphological heterogeneity in the harbor porpoise from the Black Sea and adjacent waters (Phocoena phocoena relicta).Heredity (Edinb)2020
33262284Radiation with reticulation marks the origin of a major malaria vector.Proc Natl Acad Sci U S A2020
31871624Population structure, connectivity, and demographic history of an apex marine predator, the bull shark <i>Carcharhinus leucas</i>.Ecol Evol2019
27742439Spatial variation in the accumulation of POPs and mercury in bottlenose dolphins of the Lower Florida Keys and the coastal Everglades (South Florida).Environ Pollut2017
28405389Mixing of porpoise ecotypes in southwestern UK waters revealed by genetic profiling.R Soc Open Sci2017
29089536Genetic footprint of population fragmentation and contemporary collapse in a freshwater cetacean.Sci Rep2017
28727195Patterns of divergence across the geographic and genomic landscape of a butterfly hybrid zone associated with a climatic gradient.Mol Ecol2017
28930289Genetic signatures of variation in population size in a native fungal pathogen after the recent massive plantation of its host tree.Heredity (Edinb)2017
27770989Harbour Porpoises, Phocoena phocoena, in the Mediterranean Sea and Adjacent Regions: Biogeographic Relicts of the Last Glacial Period.Adv Mar Biol2016
27759895Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing.Mol Ecol2016
25554792Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.Science2015
25431491Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics.Science2015
24888550Postglacial climate changes and rise of three ecotypes of harbour porpoises, Phocoena phocoena, in western Palearctic waters.Mol Ecol2014
25297864Ecological opportunities and specializations shaped genetic divergence in a highly mobile marine top predator.Proc Biol Sci2014
23205613Polymorphism pattern at a miniature inverted-repeat transposable element locus downstream of the domestication gene Teosinte-branched1 in wild and domesticated pearl millet.Mol Ecol2013
23708298The evolution of the Anopheles 16 genomes project.G3 (Bethesda)2013
23406496History of the invasion of the anther smut pathogen on Silene latifolia in North America.New Phytol2013
23506060Genetic signature of a range expansion and leap-frog event after the recent invasion of Europe by the grapevine downy mildew pathogen Plasmopara viticola.Mol Ecol2013
21988698Genetic structure in a dynamic baboon hybrid zone corroborates behavioural observations in a hybrid population.Mol Ecol2012
23239977Barriers to gene flow in the marine environment: insights from two common intertidal limpet species of the Atlantic and Mediterranean.PLoS One2012
22949646History of expansion and anthropogenic collapse in a top marine predator of the Black Sea estimated from genetic data.Proc Natl Acad Sci U S A2012
22984507A European melting pot of harbour porpoise in the French Atlantic coasts inferred from mitochondrial and nuclear data.PLoS One2012
22686398Different biogeographic patterns of prokaryotes and microbial eukaryotes in epilithic biofilms.Mol Ecol2012
20837604Chromosomal inversions, natural selection and adaptation in the malaria vector Anopheles funestus.Mol Biol Evol2011
21799845Cereal domestication and evolution of branching: evidence for soft selection in the Tb1 orthologue of pearl millet (Pennisetum glaucum [L.] R. Br.).PLoS One2011
21565363Cytochrome P450 1A1 expression in cetacean skin biopsies from the Indian Ocean.Mar Pollut Bull2011
21261766Temporal isolation explains host-related genetic differentiation in a group of widespread mycoparasitic fungi.Mol Ecol2011
20837605Maintenance of fungal pathogen species that are specialized to different hosts: allopatric divergence and introgression through secondary contact.Mol Biol Evol2011
20041992Finding candidate genes under positive selection in Non-model species: examples of genes involved in host specialization in pathogens.Mol Ecol2010
21187901Glacial refugia in pathogens: European genetic structure of anther smut pathogens on Silene latifolia and Silene dioica.PLoS Pathog2010
20444724Genetic and historic evidence for climate-driven population fragmentation in a top cetacean predator: the harbour porpoises in European water.Proc Biol Sci2010
19389172A relict bank vole lineage highlights the biogeographic history of the Pyrenean region in Europe.Mol Ecol2009
17229317Long-term feeding ecology and habitat use in harbour porpoises Phocoena phocoena from Scandinavian waters inferred from trace elements and stable isotopes.BMC Ecol2007
17651495Rise of oceanographic barriers in continuous populations of a cetacean: the genetic structure of harbour porpoises in Old World waters.BMC Biol2007
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Collaborators

Scott J Emrich
The Pennsylvania State University College of Medicine
Co-authored papers 5
Robert M Waterhouse
University of Lausanne
Co-authored papers 3
Robert K Wayne
Co-authored papers 2
Neil F Lobo
Eck Institute for Global Health, University of Notre Dame
Co-authored papers 2
Sean F Ryan
Exponent Inc.
Co-authored papers 2
William M Gelbart
University of California Los Angeles
Co-authored papers 2
Evgeny M Zdobnov
University of Geneva
Co-authored papers 1
Zhijian Tu
Department of Biochemistry and the Fralin Life Sciences Institute, Virginia Tech
Co-authored papers 1
Manolis Kellis
Massachusetts Institute of Technology
Co-authored papers 1
Andrew D Kern
Co-authored papers 1
Stacey Gabriel
Broad Institute of MIT and Harvard
Co-authored papers 1
Jon Mark Scriber
Michigan State University
Co-authored papers 1
Leo W Beukeboom
Groningen Institute for Evolutionary Life Sciences, University of Groningen
Co-authored papers 1
Peter Arensburger
California State Polytechnic University
Co-authored papers 1
Judith H Willis
University of Georgia
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Timothy T Harkins
NVIDIA Corporation
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Michael E Pfrender
University of Notre Dame
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Irwin Jungreis
Broad Institute of MIT and Harvard
Co-authored papers 1
Bruce W Birren
Broad Institute of MIT and Harvard
Co-authored papers 1
Jessica J Hellmann
Institute On the Environment, University of Minnesota
Co-authored papers 1
Shawn T O'Neil
Northern Michigan University, Oregon State University, University of Colorado Anschutz Medical Campus Bookstore, University of Notre Dame
Co-authored papers 1
Josquin Daron
Co-authored papers 1
Philippos Aris Papathanos
The Hebrew University of Jerusalem
Co-authored papers 1
Release 1.2