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Author Details

Samuel H Payne
Brigham Young University
2006
93
33
Leah V Schaffer (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36828128Challenges and Opportunities for Single-cell Computational Proteomics.Mol Cell Proteomics2023
38017024A proteomic meta-analysis refinement of plasma extracellular vesicles.Sci Data2023
36828128Challenges and Opportunities for Single-cell Computational Proteomics.Mol Cell Proteomics2023
37333094TDP-43-stratified single-cell proteomic profiling of postmortem human spinal motor neurons reveals protein dynamics in amyotrophic lateral sclerosis.bioRxiv2023
37380610Data-Dependent Acquisition with Precursor Coisolation Improves Proteome Coverage and Measurement Throughput for Label-Free Single-Cell Proteomics.Angew Chem Int Ed Engl2023
36744821Toward an Integrated Machine Learning Model of a Proteomics Experiment.J Proteome Res2023
37167627HyperSCP: Combining Isotopic and Isobaric Labeling for Higher Throughput Single-Cell Proteomics.Anal Chem2023
38017024A proteomic meta-analysis refinement of plasma extracellular vesicles.Sci Data2023
37380610Data-Dependent Acquisition with Precursor Coisolation Improves Proteome Coverage and Measurement Throughput for Label-Free Single-Cell Proteomics.Angew Chem Int Ed Engl2023
37167627HyperSCP: Combining Isotopic and Isobaric Labeling for Higher Throughput Single-Cell Proteomics.Anal Chem2023
37333094TDP-43-stratified single-cell proteomic profiling of postmortem human spinal motor neurons reveals protein dynamics in amyotrophic lateral sclerosis.bioRxiv2023
36744821Toward an Integrated Machine Learning Model of a Proteomics Experiment.J Proteome Res2023
34382401A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows.J Proteome Res2022
35793793Uncovering Hidden Members and Functions of the Soil Microbiome Using <i>De Novo</i> Metaproteomics.J Proteome Res2022
34382401A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows.J Proteome Res2022
35793793Uncovering Hidden Members and Functions of the Soil Microbiome Using <i>De Novo</i> Metaproteomics.J Proteome Res2022
33352054Fully Automated Sample Processing and Analysis Workflow for Low-Input Proteome Profiling.Anal Chem2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
34145874AutoCCS: automated collision cross-section calculation software for ion mobility spectrometry-mass spectrometry.Bioinformatics2021
33560848Simplified and Unified Access to Cancer Proteogenomic Data.J Proteome Res2021
33875650Spatially interacting phosphorylation sites and mutations in cancer.Nat Commun2021
33761238Correction to Fully Automated Sample Processing and Analysis Workflow for Low-Input Proteome Profiling.Anal Chem2021
33915259Calculating Sample Size Requirements for Temporal Dynamics in Single-Cell Proteomics.Mol Cell Proteomics2021
33352054Fully Automated Sample Processing and Analysis Workflow for Low-Input Proteome Profiling.Anal Chem2021
34847169Detecting fabrication in large-scale molecular omics data.PLoS One2021
34594439Online Tools for Teaching Cancer Bioinformatics.J Microbiol Biol Educ2021
34809453A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.mBio2021
33875650Spatially interacting phosphorylation sites and mutations in cancer.Nat Commun2021
33761238Correction to Fully Automated Sample Processing and Analysis Workflow for Low-Input Proteome Profiling.Anal Chem2021
33560848Simplified and Unified Access to Cancer Proteogenomic Data.J Proteome Res2021
33915259Calculating Sample Size Requirements for Temporal Dynamics in Single-Cell Proteomics.Mol Cell Proteomics2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
34809453A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.mBio2021
34847169Detecting fabrication in large-scale molecular omics data.PLoS One2021
34594439Online Tools for Teaching Cancer Bioinformatics.J Microbiol Biol Educ2021
34145874AutoCCS: automated collision cross-section calculation software for ion mobility spectrometry-mass spectrometry.Bioinformatics2021
32529193Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32529193Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32954372Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32790999Simple and Efficient Data Analysis Dissemination for Individual Laboratories.J Proteome Res2020
32790999Simple and Efficient Data Analysis Dissemination for Individual Laboratories.J Proteome Res2020
32954372Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
30525668Rapidly Assessing the Quality of Targeted Proteomics Experiments through Monitoring Stable-Isotope Labeled Standards.J Proteome Res2019
31615958Bacterial Longevity Requires Protein Synthesis and a Stringent Response.mBio2019
30525668Rapidly Assessing the Quality of Targeted Proteomics Experiments through Monitoring Stable-Isotope Labeled Standards.J Proteome Res2019
31273047Reproducibility and Transparency by Design.Mol Cell Proteomics2019
30967468Correction for Christensen et al., "Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli".mBio2019
31213479Extracting Pathway-level Signatures from Proteogenomic Data in Breast Cancer Using Independent Component Analysis.Mol Cell Proteomics2019
31050378Identification and Quantification of Proteoforms by Mass Spectrometry.Proteomics2019
31196969Regulated Phosphosignaling Associated with Breast Cancer Subtypes and Druggability.Mol Cell Proteomics2019
  • 1 - 50 of 186

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Collaborators

Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 35
Matthew E Monroe
Pacific Northwest National Laboratory
Co-authored papers 19
Tao Liu
Pacific Northwest National Laboratory
Co-authored papers 13
Karin D Rodland
Oregon Health and Science University
Co-authored papers 12
Vladislav A Petyuk
Pacific Northwest National Laboratory
Co-authored papers 10
Ronald J Moore
Co-authored papers 9
David Feny??
Institute for Systems Genetics, NYU Grossman School of Medicine
Co-authored papers 9
Erin S Baker
North Carolina State University
Co-authored papers 8
Henry Rodriguez
Office of Cancer Clinical Proteomics Research, National Cancer Institute
Co-authored papers 8
Li Ding
McDonnell Genome Institute, Washington University School of Medicine
Co-authored papers 8
Jason E McDermott
Pacific Northwest National Laboratory
Co-authored papers 7
Anil K Shukla
Pacific Northwest National Laboratory
Co-authored papers 7
Ernesto S Nakayasu
Co-authored papers 6
Matthew A Wyczalkowski
Washington University in St Louis
Co-authored papers 6
Bing Zhang
Baylor College of Medicine
Co-authored papers 6
Thomas O Metz
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Emily S Boja
Office of Cancer Clinical Proteomics Research, National Cancer Institute
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Christopher R Kinsinger
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Joshua N Adkins
Co-authored papers 6
Samuel O Purvine
Pacific Northwest National Laboratory
Co-authored papers 6
Vineet Bafna
University of California San Diego
Co-authored papers 6
Rui Zhao
Co-authored papers 5
Reid Townsend
Co-authored papers 5
Mary S Lipton
Pacific Northwest National Laboratory
Co-authored papers 5
Daniel W Chan
Division of Clinical Chemistry, Johns Hopkins University
Co-authored papers 5
Ljiljana Pa??a-Toli??
Pacific Northwest National Laboratory
Co-authored papers 5
Kelly V Ruggles
Co-authored papers 5
Zhen Zhang
Co-authored papers 5
Gordon A Anderson
Co-authored papers 5
Sangtae Kim
Co-authored papers 5
Release 1.2