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Author Details

Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
0000-0002-6601-2165
1998
169
63
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37503093On the limitations of large language models in clinical diagnosis.medRxiv2024
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
37953324The Human Phenotype Ontology in 2024: phenotypes around the world.Nucleic Acids Res2024
37503093On the limitations of large language models in clinical diagnosis.medRxiv2024
37953324The Human Phenotype Ontology in 2024: phenotypes around the world.Nucleic Acids Res2024
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
36929917An expectation-maximization framework for comprehensive prediction of isoform-specific functions.Bioinformatics2023
37829294Aligning Standards Communities for Omics Biodiversity Data: Sustainable Darwin Core-MIxS Interoperability.Biodivers Data J2023
37900350An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges.J Clin Transl Sci2023
38076838DATA RESOURCES AND ANALYSES FAIR Header Reference genome: A TRUSTworthy standard.bioRxiv2023
37963467The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human disease.Med2023
36823605The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond.J Biomed Semantics2023
37076585The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.Mamm Genome2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37196000Phenopacket-tools: Building and validating GA4GH Phenopackets.PLoS One2023
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
36747660The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.bioRxiv2023
36693887Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
37117232Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
36929917An expectation-maximization framework for comprehensive prediction of isoform-specific functions.Bioinformatics2023
36603501Perspectives for self-driving labs in synthetic biology.Curr Opin Biotechnol2023
37503136The Medical Action Ontology: A Tool for Annotating and Analyzing Treatments and Clinical Management of Human Disease.medRxiv2023
37502882Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests.medRxiv2023
37963467The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human disease.Med2023
38076838DATA RESOURCES AND ANALYSES FAIR Header Reference genome: A TRUSTworthy standard.bioRxiv2023
37900350An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges.J Clin Transl Sci2023
37503136The Medical Action Ontology: A Tool for Annotating and Analyzing Treatments and Clinical Management of Human Disease.medRxiv2023
37829294Aligning Standards Communities for Omics Biodiversity Data: Sustainable Darwin Core-MIxS Interoperability.Biodivers Data J2023
37502882Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests.medRxiv2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
37117232Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
37076585The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.Mamm Genome2023
37196000Phenopacket-tools: Building and validating GA4GH Phenopackets.PLoS One2023
36693887Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
36747660The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.bioRxiv2023
36603501Perspectives for self-driving labs in synthetic biology.Curr Opin Biotechnol2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
36823605The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond.J Biomed Semantics2023
34986598ECO: the Evidence and Conclusion Ontology, an update for 2022.Nucleic Acids Res2022
35391505Phenotype-driven approaches to enhance variant prioritization and diagnosis of rare disease.Hum Mutat2022
36303775Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.Front Bioinform2022
35705716The GA4GH Phenopacket schema defines a computable representation of clinical data.Nat Biotechnol2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
35570298NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study.Virol J2022
36208225Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.Database (Oxford)2022
35484572SvAnna: efficient and accurate pathogenicity prediction of coding and regulatory structural variants in long-read genome sequencing.Genome Med2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
36125173Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.Clin Transl Sci2022
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