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Author Details

Alice H Berger
Fred Hutchinson Cancer Research Center
2005
38
20
PMIDPaper TitleJournal TitlePublished Year
36712079Somatic mutation but not aneuploidy differentiates lung cancer in never-smokers and smokers.bioRxiv2023
36712079Somatic mutation but not aneuploidy differentiates lung cancer in never-smokers and smokers.bioRxiv2023
37396617pgMAP: a pipeline to enable guide RNA read mapping from dual-targeting CRISPR screens.ArXiv2023
37396617pgMAP: a pipeline to enable guide RNA read mapping from dual-targeting CRISPR screens.ArXiv2023
35058622Massively parallel phenotyping of coding variants in cancer with Perturb-seq.Nat Biotechnol2022
35512219All About That Ras: Novel Fusion Drives Ras Pathway Activation in Lung Cancer.Clin Cancer Res2022
35418694Correction to: Oncogenic RIT1 mutations in lung adenocarcinoma.Oncogene2022
36258042Author Correction: Massively parallel phenotyping of coding variants in cancer with Perturb-seq.Nat Biotechnol2022
35353015Cell Painting predicts impact of lung cancer variants.Mol Biol Cell2022
36522653Oncogenic KRAS alters splicing factor phosphorylation and alternative splicing in lung cancer.BMC Cancer2022
35058622Massively parallel phenotyping of coding variants in cancer with Perturb-seq.Nat Biotechnol2022
35512219All About That Ras: Novel Fusion Drives Ras Pathway Activation in Lung Cancer.Clin Cancer Res2022
35353015Cell Painting predicts impact of lung cancer variants.Mol Biol Cell2022
35418694Correction to: Oncogenic RIT1 mutations in lung adenocarcinoma.Oncogene2022
36522653Oncogenic KRAS alters splicing factor phosphorylation and alternative splicing in lung cancer.BMC Cancer2022
36258042Author Correction: Massively parallel phenotyping of coding variants in cancer with Perturb-seq.Nat Biotechnol2022
34373451Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer.Nat Commun2021
35419481Genome-wide CRISPR screening reveals novel therapeutic targets in RIT1-driven lung cancer.Mol Cell Oncol2021
34236315Loss of MGA repression mediated by an atypical polycomb complex promotes tumor progression and invasiveness.Elife2021
33626341Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway.Cell Rep2021
33606973CRISPR base editor screens identify variant function at scale.Mol Cell2021
34469736Discovery of synthetic lethal and tumor suppressor paralog pairs in the human genome.Cell Rep2021
34846918Multiomic characterization of oncogenic signaling mediated by wild-type and mutant RIT1.Sci Signal2021
34373451Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer.Nat Commun2021
35419481Genome-wide CRISPR screening reveals novel therapeutic targets in RIT1-driven lung cancer.Mol Cell Oncol2021
33626341Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway.Cell Rep2021
33606973CRISPR base editor screens identify variant function at scale.Mol Cell2021
34469736Discovery of synthetic lethal and tumor suppressor paralog pairs in the human genome.Cell Rep2021
34846918Multiomic characterization of oncogenic signaling mediated by wild-type and mutant RIT1.Sci Signal2021
34236315Loss of MGA repression mediated by an atypical polycomb complex promotes tumor progression and invasiveness.Elife2021
31911676RNA isoform screens uncover the essentiality and tumor-suppressor activity of ultraconserved poison exons.Nat Genet2020
31911676RNA isoform screens uncover the essentiality and tumor-suppressor activity of ultraconserved poison exons.Nat Genet2020
30475228Compound haploinsufficiency of Dok2 and Dusp4 promotes lung tumorigenesis.J Clin Invest2019
31862013Recommendations for the collection and use of multiplexed functional data for clinical variant interpretation.Genome Med2019
30475228Compound haploinsufficiency of Dok2 and Dusp4 promotes lung tumorigenesis.J Clin Invest2019
31862013Recommendations for the collection and use of multiplexed functional data for clinical variant interpretation.Genome Med2019
29625050Oncogenic Signaling Pathways in The Cancer Genome Atlas.Cell2018
29625050Oncogenic Signaling Pathways in The Cancer Genome Atlas.Cell2018
28522754<i>MET</i> Exon 14 Mutation Encodes an Actionable Therapeutic Target in Lung Adenocarcinoma.Cancer Res2017
28522754<i>MET</i> Exon 14 Mutation Encodes an Actionable Therapeutic Target in Lung Adenocarcinoma.Cancer Res2017
29195078A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 Profiles.Cell2017
29232558High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2017
29232558High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2017
29195078A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 Profiles.Cell2017
27158780Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas.Nat Genet2016
27478040High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2016
27158780Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas.Nat Genet2016
27882345Institutional implementation of clinical tumor profiling on an unselected cancer population.JCI Insight2016
27882345Institutional implementation of clinical tumor profiling on an unselected cancer population.JCI Insight2016
27478040High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2016
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Collaborators

Matthew Meyerson
Broad Institute
Co-authored papers 12
Marcin Imielinski
Co-authored papers 8
Angela Brooks-Wilson
Co-authored papers 7
Jesse S Boehm
Broad Institute of Harvard and MIT
Co-authored papers 6
Gad Getz
Broad Institute of the Massachusetts Institute of Technology and Harvard
Co-authored papers 6
Joshua D Campbell
Co-authored papers 5
Federica Piccioni
Co-authored papers 5
William C Hahn
Broad Institute of MIT and Harvard, USA Dana-Farber Cancer Institute
Co-authored papers 4
Xiaoyun Wu
Co-authored papers 4
Robert K Bradley
Fred Hutchinson Cancer Research Center, University of Washington
Co-authored papers 4
Ted Natoli
Co-authored papers 3
Eric A Collisson
University of California san francisco
Co-authored papers 3
Andrew D Cherniack
Dana-Farber Cancer Institute
Co-authored papers 3
David E Root
Broad Institute of Harvard and MIT
Co-authored papers 3
Marc Ladanyi
Memorial Sloan Kettering Cancer Center
Co-authored papers 3
Rajiv Narayan
Co-authored papers 3
Mukta Bagul
Co-authored papers 3
Larson Hogstrom
Co-authored papers 3
Michael S Lawrence
Co-authored papers 3
John G Doench
Co-authored papers 3
Todd R Golub
Broad Institute of MIT and Harvard
Co-authored papers 3
Jeremiah Wala
The Broad Institute of MIT and Harvard
Co-authored papers 3
David L Lahr
Co-authored papers 3
Aravind Subramanian
Co-authored papers 3
Shantanu Singh
Co-authored papers 3
Levi A Garraway
Broad Institute of Harvard and MIT
Co-authored papers 3
Bang Wong
Co-authored papers 3
Pablo Tamayo
University of California San Diego
Co-authored papers 2
Steven A Carr
Broad Institute of MIT and Harvard
Co-authored papers 2
Itay Tirosh
Weizmann Institute of Medical Sciences
Co-authored papers 2
Release 1.2