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Author Details

Ernesto S Nakayasu
2005
133
40
PMIDPaper TitleJournal TitlePublished Year
37502972Decrease in multiple complement protein levels is associated with the development of islet autoimmunity and type 1 diabetes.medRxiv2023
37918404Inhibition of polyamine biosynthesis preserves β cell function in type 1 diabetes.Cell Rep Med2023
37735622Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response.Clin Proteomics2023
38076918Protection of β cells against pro-inflammatory cytokine stress by the GDF15-ERBB2 signaling.medRxiv2023
37468756Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).Nat Cell Biol2023
37398265Analysis of a macrophage carbamylated proteome reveals a function in post-translational modification crosstalk.Res Sq2023
36819069Interrogating the role of the milk microbiome in mastitis in the multi-omics era.Front Microbiol2023
37390828Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity.Cell Rep Med2023
37262077Genetically Encoded Crosslinking Enables Identification of Multivalent Ubiquitin-Deubiquitylating Enzyme Interactions.2023
37235544Comparing Top-Down Proteoform Identification: Deconvolution, PrSM Overlap, and PTM Detection.J Proteome Res2023
36849975Rapid remodeling of the soil lipidome in response to a drying-rewetting event.Microbiome2023
35084332<i>Legionella pneumophila</i> modulates host energy metabolism by ADP-ribosylation of ADP/ATP translocases.Elife2022
35889157Identification of Exported <i>Plasmodium falciparum</i> Proteins That Bind to the Erythrocyte Cytoskeleton.Microorganisms2022
35817393Extracellular vesicles in β cell biology: Role of lipids in vesicle biogenesis, cargo, and intercellular signaling.Molecular Metabolism2022
35430813DEIMoS: An Open-Source Tool for Processing High-Dimensional Mass Spectrometry Data.Anal Chem2022
35793793Uncovering Hidden Members and Functions of the Soil Microbiome Using <i>De Novo</i> Metaproteomics.J Proteome Res2022
35604121Regulation of Translation by Lysine Acetylation in Escherichia coli.mBio2022
35468213Integration of Infant Metabolite, Genetic, and Islet Autoimmunity Signatures to Predict Type 1 Diabetes by Age 6 Years.J Clin Endocrinol Metab2022
36624844EMC3 regulates mesenchymal cell survival via control of the mitotic spindle assembly.iScience2022
35138971GDF15: a potential therapeutic target for type 1 diabetes.Expert Opin Ther Targets2022
34636549Bayesian Inference for Integrating <i>Yarrowia lipolytica</i> Multiomics Datasets with Metabolic Modeling.ACS Synth Biol2021
33806609Parallel Multi-Omics in High-Risk Subjects for the Identification of Integrated Biomarker Signatures of Type 1 Diabetes.Biomolecules2021
34012462Omics Approaches for Understanding Biogenesis, Composition and Functions of Fungal Extracellular Vesicles.Front Genet2021
33785616Cryptococcus neoformans<i>-</i>Infected Macrophages Release Proinflammatory Extracellular Vesicles: Insight into Their Components by Multi-omics.mBio2021
34244696Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation.Nat Protoc2021
33124145Prediction of the development of islet autoantibodies through integration of environmental, genetic, and metabolic markers.J Diabetes2021
34630944Transcriptional and translational landscape of in response to caspofungin.Computational and Structural Biotechnology Journal2021
34972874Lessons Learned from Studying Histoplasma capsulatum Extracellular Vesicles.Current Topics in Microbiology and Immunology2021
34445459Integrated Metabolomics and Proteomics Analyses in the Local Milieu of Islet Allografts in Rejection versus Tolerance.Int J Mol Sci2021
34496231Deoxyhypusine synthase promotes a pro-inflammatory macrophage phenotype.Cell Metab2021
34488448The <i>Legionella</i> Effector SdjA Is a Bifunctional Enzyme That Distinctly Regulates Phosphoribosyl Ubiquitination.mBio2021
34427507Comparative Molecular and Immunoregulatory Analysis of Extracellular Vesicles from Candida albicans and Candida auris.mSystems2021
34809453A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.mBio2021
32498228Remodeling of the <i>Histoplasma Capsulatum</i> Membrane Induced by Monoclonal Antibodies.Vaccines (Basel)2020
32406582Media matters! Alterations in the loading and release of Histoplasma capsulatum extracellular vesicles in response to different nutritional milieus.Cell Microbiol2020
31883096Metabolite, Protein, and Lipid Extraction (MPLEx): A Method that Simultaneously Inactivates Middle East Respiratory Syndrome Coronavirus and Allows Analysis of Multiple Host Cell Components Following Infection.Methods Mol Biol2020
31825121Legionella pneumophila regulates the activity of UBE2N by deamidase-mediated deubiquitination.EMBO Journal2020
31928885Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention.Cell Metab2020
32444635An integrated multi-omics approach identifies the landscape of interferon-α-mediated responses of human pancreatic beta cells.Nat Commun2020
32442648Longitudinal proteomics analysis in the immediate microenvironment of islet allografts during progression of rejection.J Proteomics2020
33048839Probing islet stress in type 1 diabetes.Aging (Albany NY)2020
32983060Fic Proteins Inhibit the Activity of Topoisomerase IV by AMPylation in Diverse Bacteria.Frontiers in Microbiology2020
31320812Extending Classification Algorithms to Case-Control Studies.Biomed Eng Comput Biol2019
31676868The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes.Nat Genet2019
31615958Bacterial Longevity Requires Protein Synthesis and a Stringent Response.mBio2019
30504226<i>Listeria monocytogenes</i> virulence factors, including listeriolysin O, are secreted in biologically active extracellular vesicles.J Biol Chem2019
30420781Legionella pneumophila inhibits immune signalling via MavC-mediated transglutaminase-induced ubiquitination of UBE2N.Nature Microbiology2019
30525668Rapidly Assessing the Quality of Targeted Proteomics Experiments through Monitoring Stable-Isotope Labeled Standards.J Proteome Res2019
31186339Multi-omics Signature of Candida auris, an Emerging and Multidrug-Resistant Pathogen.mSystems2019
31232620The role of proteomics in assessing beta-cell dysfunction and death in type 1 diabetes.Expert Rev Proteomics2019
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