Author details

Full Name

Alexandre Kuhn

Affiliation

Institute of Biotechnology, University of Lausanne

ORCID

Career Start Year

2003

Papers

H Index

Expertise

CM4AI Collaborator

Timothy Clark (CM4AI)

PMID	Paper Title	Journal Title	Published Year
30602774	Detecting topological variations of DNA at single-molecule level.	Nat Commun	2019
26153459	Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants.	BMC Genomics	2015
24847061	Linkage disequilibrium and signatures of positive selection around LINE-1 retrotransposons in the human genome.	Proc Natl Acad Sci U S A	2014
25431099	Correspondence regarding Zhong et al., BMC Bioinformatics 2013 Mar 7;14:89.	BMC Bioinformatics	2014
23894273	A microfluidic device for preparing next generation DNA sequencing libraries and for automating other laboratory protocols that require one or more column chromatography steps.	PLoS One	2013
25062675	Genome-wide increase in histone H2A ubiquitylation in a mouse model of Huntington's disease.	J Huntingtons Dis	2013
22848491	Genome-wide histone acetylation is altered in a transgenic mouse model of Huntington's disease.	PLoS One	2012
23145530	Cell population-specific expression analysis of human cerebellum.	BMC Genomics	2012
22712074	Gene expression analysis on a single cell level in Purkinje cells of Huntington's disease transgenic mice.	Neurosci Lett	2012
22917585	Comparative analyses of Purkinje cell gene expression profiles reveal shared molecular abnormalities in models of different polyglutamine diseases.	Brain Res	2012
21177255	In vivo cell-autonomous transcriptional abnormalities revealed in mice expressing mutant huntingtin in striatal but not cortical neurons.	Hum Mol Genet	2011
21983921	Population-specific expression analysis (PSEA) reveals molecular changes in diseased brain.	Nat Methods	2011
21368140	Combined transcriptome analysis of fetal human and mouse cerebral cortex exposed to alcohol.	Proc Natl Acad Sci U S A	2011
21334439	Gene expression profiling of R6/2 transgenic mice with different CAG repeat lengths reveals genes associated with disease onset and progression in Huntington's disease.	Neurobiol Dis	2011
20089533	Transcriptional changes in Huntington disease identified using genome-wide expression profiling and cross-platform analysis.	Hum Mol Genet	2010
20720508	Decreased Lin7b expression in layer 5 pyramidal neurons may contribute to impaired corticostriatal connectivity in huntington disease.	J Neuropathol Exp Neurol	2010
20613636	Environmental enrichment reduces neuronal intranuclear inclusion load but has no effect on messenger RNA expression in a mouse model of Huntington disease.	J Neuropathol Exp Neurol	2010
20378838	SIRT2 inhibition achieves neuroprotection by decreasing sterol biosynthesis.	Proc Natl Acad Sci U S A	2010
18728069	Non-invasive gene-expression-based detection of well-developed collateral function in individuals with and without coronary artery disease.	Heart	2009
19390590	Short-term striatal gene expression responses to brain-derived neurotrophic factor are dependent on MEK and ERK activation.	PLoS One	2009
18201381	Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'.	BMC Bioinformatics	2008
18815258	Dysregulation of gene expression in primary neuron models of Huntington's disease shows that polyglutamine-related effects on the striatal transcriptome may not be dependent on brain circuitry.	J Neurosci	2008
17519223	Mutant huntingtin's effects on striatal gene expression in mice recapitulate changes observed in human Huntington's disease brain and do not differ with mutant huntingtin length or wild-type huntingtin dosage.	Hum Mol Genet	2007
17724341	Analysis of potential transcriptomic biomarkers for Huntington's disease in peripheral blood.	Proc Natl Acad Sci U S A	2007
16467349	Regional and cellular gene expression changes in human Huntington's disease brain.	Hum Mol Genet	2006
17061979	Gene expression profiling reveals consistent differences between clinical samples of human leukaemias and their model cell lines.	Br J Haematol	2006
15014109	Neuronal integration of synaptic input in the fluctuation-driven regime.	J Neurosci	2004
12590820	Higher-order statistics of input ensembles and the response of simple model neurons.	Neural Comput	2003

1 - 28 of 28

Galina Erikson

Salk Institute of Biological Studies

Career Start Year 2014

Number of shared co-authors 0

Margherita Francescatto

German Center for Neurodegenerative Diseases

Career Start Year 2013

Number of shared co-authors 4

Hans-Ulrich Klein

Columbia University Irving Medical Center

Career Start Year 2009

Number of shared co-authors 1

Oliver Stegle

Wellcome Sanger Institute

Career Start Year 2008

Number of shared co-authors 1

Minghui Wang

Icahn School of Medicine at Mount Sinai

Career Start Year 2007

Number of shared co-authors 3

Zizhen Yao

Allen Institute for Brain Science

Career Start Year 2006

Number of shared co-authors 2

Sara Mostafavi

University of British Columbia and BC Children's Hospital

Career Start Year 2006

Number of shared co-authors 1

Gabriel E Hoffman

Center for Disease Neurogenomics, Icahn School of Medicine at Mount Sinai

Career Start Year 2006

Number of shared co-authors 2

Jesse Gillis

Stanley Institute for Cognitive Genomics

Career Start Year 2005

Number of shared co-authors 2

Bin Zhang

Graduate School of Medicine, The University of Tokyo

Career Start Year 2004

Number of shared co-authors 3

Michael C Oldham

University of California san francisco

Career Start Year 2004

Number of shared co-authors 2

Loyal A Goff

Johns Hopkins University School of Medicine

Career Start Year 2004

Number of shared co-authors 0

Beth Wilmot

Knight Cancer Institute, Oregon Health & Science University

Career Start Year 2004

Number of shared co-authors 2

Mikael Huss

Stockholm University

Career Start Year 2003

Number of shared co-authors 0

Zhandong Liu

Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital

Career Start Year 2003

Number of shared co-authors 4

Seth A Ament

Institute for Genome Sciences, University of Maryland School of Medicine

Career Start Year 2001

Number of shared co-authors 0

Mina Ryten

UCL Great Ormond Street Institute of Child Health, University College London

Career Start Year 2001

Number of shared co-authors 5

Cory C Funk

Institute for Systems Biology

Career Start Year 1999

Number of shared co-authors 3

Shawn Levy

HudsonAlpha Institute for Biotechnology

Career Start Year 1999

Number of shared co-authors 0

Aaron R Jeffries

University of Exeter

Career Start Year 1999

Number of shared co-authors 0

Matthew J Huentelman

The Translational Genomics Research Institute (TGen)

Career Start Year 1998

Number of shared co-authors 5

Peter A C 't Hoen

Radboud University Medical Center

Career Start Year 1998

Number of shared co-authors 3

Shannon K McWeeney

Oregon Health & Science University, University of California Berkeley

Career Start Year 1997

Number of shared co-authors 2

Wolfgang Huber

Technische Universitat Munchen

Career Start Year 1995

Number of shared co-authors 0

Sten Linnarsson

Karolinska Institute

Career Start Year 1995

Number of shared co-authors 1

Stanley F Nelson

university of california los angeles

Career Start Year 1993

Number of shared co-authors 2

Kevin G Becker

National Institute on Aging, National Institutes of Health

Career Start Year 1992

Number of shared co-authors 0

Wing Hung Wong

Stanford University

Career Start Year 1991

Number of shared co-authors 1

Stefano Gustincich

Istituto Italiano di Tecnologia

Career Start Year 1989

Number of shared co-authors 1

Leonard C Schalkwyk

University of Essex

Career Start Year 1986

Number of shared co-authors 1

row(s) 1 - 30 of 30

Ruth Luthi-Carter

University of Leicester

Co-authored papers 16

Mauro Delorenzi

Co-authored papers 6

Jang-Ho J Cha

Novartis Institutes for Biomedical Research

Co-authored papers 4

James M Olson

Clinical Research Division, Fred Hutchinson Cancer Center

Co-authored papers 3

Stephen R Quake

Stanford University

Co-authored papers 3

Ghazaleh Sadri-Vakili

Sean M. Healey & AMG Center for ALS at Mass General

Co-authored papers 3

Darlene R Goldstein

Co-authored papers 3

Eva Xia

Mass General Institute for Neurodegenerative Disease, Massachusetts General Hospital

Co-authored papers 2

Dmitriy Leyfer

Boston University

Co-authored papers 2

Charles Kooperberg

Co-authored papers 2

Tim Clark

Co-authored papers 2

Sudeshna Das

Massachusetts General Hospital

Co-authored papers 2

Timothy Clark (CM4AI)

University of Virginia

Co-authored papers 2

Daniel H Geschwind

University of California los angeles

Co-authored papers 2

Karen N McFarland

Center for Translational Research in Neurodegenerative Disease, University of Florida

Co-authored papers 2

Tingting Sun

Department of Food Engineering, Harbin University

Co-authored papers 2

Giovanni Coppola

David Geffen School of Medicine, University of California los angeles

Co-authored papers 2

Gavin R Sangrey

MassGeneral Institute for Neurodegenerative Disease, Massachusetts General Hospital

Co-authored papers 2

Thierry Sengstag

University of Basel

Co-authored papers 2

Michael R Hayden

Co-authored papers 2

Aaron K Aragaki

Co-authored papers 1

Andrew B Singleton

National Institute on Aging

Co-authored papers 1

Tien Yin Wong

Tsinghua University

Co-authored papers 1

Leslie M Thompson

Co-authored papers 1

Ching-Yu Cheng

Singapore Eye Research Institute, Singapore Duke-NUS Medical School

Co-authored papers 1

Peter Holmans

Co-authored papers 1

Mee-Ohk Kim

University of California san francisco

Co-authored papers 1

Raymond S Lim

Memorial Sloan Kettering Cancer Center

Co-authored papers 1

Michelle E Ehrlich

Icahn School of Medicine at Mount Sinai

Co-authored papers 1

Yuka Imamura Kawasawa

Co-authored papers 1

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