Author details

Full Name

Yingying Li

Affiliation

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37169918	Widespread extinctions of co-diversified primate gut bacterial symbionts from humans.		2023
37277946	Barriers to chimpanzee gene flow at the south-east edge of their distribution.		2023
36823144	Malaria-driven adaptation of MHC class I in wild bonobo populations.		2023
36629414	A Germline-Targeting Chimpanzee SIV Envelope Glycoprotein Elicits a New Class of V2-Apex Directed Cross-Neutralizing Antibodies.	mBio	2023
37381849	Reproductive inequality among males in the genus .		2023
35880874	Correction for Rudicell et al., "High Prevalence of Simian Immunodeficiency Virus Infection in a Community of Savanna Chimpanzees".	Journal of Virology	2022
35387986	Zoonotic origin of the human malaria parasite Plasmodium malariae from African apes.	Nature Communications	2022
36167977	The ecology and epidemiology of malaria parasitism in wild chimpanzee reservoirs.	Communications Biology	2022
32985084	Urine as a high-quality source of host genomic DNA from wild populations.	Molecular Ecology Resources	2021
33771926	CD4 receptor diversity represents an ancient protection mechanism against primate lentiviruses.	Proc Natl Acad Sci U S A	2021
33441429	Heightened resistance to host type 1 interferons characterizes HIV-1 at transmission and after antiretroviral therapy interruption.	Sci Transl Med	2021
30718403	CD4 receptor diversity in chimpanzees protects against SIV infection.	Proc Natl Acad Sci U S A	2019
31748275	Contribution of proteasome-catalyzed peptide -splicing to viral targeting by CD8 T cells in HIV-1 infection.	Proceedings of the National Academy of Sciences of the United States of America	2019
26676710	Destabilization of the gut microbiome marks the end-stage of simian immunodeficiency virus infection in wild chimpanzees.	Am J Primatol	2018
30355496	Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth.	Cell Reports	2018
30250675	CHIIMP: An automated high-throughput microsatellite genotyping platform reveals greater allelic diversity in wild chimpanzees.	Ecology and Evolution	2018
30127015	Evolutionary history of human revealed by genome-wide analyses of related ape parasites.	Proceedings of the National Academy of Sciences of the United States of America	2018
29476866	Investigating zoonotic infection barriers to ape Plasmodium parasites using faecal DNA analysis.	International Journal for Parasitology	2018
29298306	DNA recovery from wild chimpanzee tools.	PLoS ONE	2018
29362238	Adaptive Evolution of RH5 in Ape species of the Subgenus.	mBio	2018
29588401	Allometry and Ecology of the Bilaterian Gut Microbiome.	mBio	2018
29789362	Reply to Forni et al., "Multiple Selected Changes May Modulate the Molecular Interaction between RH5 and Primate Basigin".	mBio	2018
27182786	Socioecological correlates of clinical signs in two communities of wild chimpanzees (Pan troglodytes) at Gombe National Park, Tanzania.	American Journal of Primatology	2018
27309976	Oesophagostomiasis in non-human primates of Gombe National Park, Tanzania.	American Journal of Primatology	2018
28069935	Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness.	Proceedings of the National Academy of Sciences of the United States of America	2017
28348269	Bonobos Maintain Immune System Diversity with Three Functional Types of MHC-B.	Journal of Immunology	2017
28763511	Correction: The Malagarasi River Does Not Form an Absolute Barrier to Chimpanzee Movement in Western Tanzania.	PLoS ONE	2017
28576126	Effective treatment of SIVcpz-induced immunodeficiency in a captive western chimpanzee.	Retrovirology	2017
29158512	Wild bonobos host geographically restricted malaria parasites including a putative new Laverania species.	Nature Communications	2017
27381764	Out of Africa: origins and evolution of the human malaria parasites Plasmodium falciparum and Plasmodium vivax.	International Journal for Parasitology	2017
28280546	Chimpanzees breed with genetically dissimilar mates.	Royal Society Open Science	2017
27774304	Genetic diversity of STLV-2 and interspecies transmission of STLV-3 in wild-living bonobos.	Virus Evol	2016
27289102	Multigenomic Delineation of Plasmodium Species of the Laverania Subgenus Infecting Wild-Living Chimpanzees and Gorillas.	Genome Biology and Evolution	2016
27002652	Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria.	Nat Commun	2016
26020813	Signature Patterns of MHC Diversity in Three Gombe Communities of Wild Chimpanzees Reflect Fitness in Reproduction and Immune Defense against SIVcpz.	PLoS Biology	2015
25900654	Neutralization properties of simian immunodeficiency viruses infecting chimpanzees and gorillas.	mBio	2015
26506369	Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants.	Viruses	2015
24557500	African origin of the malaria parasite Plasmodium vivax.	Nat Commun	2014
25368157	Rapid changes in the gut microbiome during human evolution.	Proceedings of the National Academy of Sciences of the United States of America	2014
23569255	Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria.	Proc Natl Acad Sci U S A	2013
24034619	SIV-induced instability of the chimpanzee gut microbiome.		2013
23939239	Evidence for continuing cross-species transmission of SIVsmm to humans: characterization of a new HIV-2 lineage in rural CÃ´te d'Ivoire.	AIDS	2013
23804402	Sympatric chimpanzees and gorillas harbor convergent gut microbial communities.	Genome Research	2013
23514615	The transmembrane domain of HIV-1 Vpu is sufficient to confer anti-tetherin activity to SIVcpz and SIVgor Vpu proteins: cytoplasmic determinants of Vpu function.	Retrovirology	2013
23536841	The malagarasi river does not form an absolute barrier to chimpanzee movement in Western Tanzania.	PLoS ONE	2013
23055550	Distinct evolutionary pressures underlie diversity in simian immunodeficiency virus and human immunodeficiency virus lineages.	Journal of Virology	2012
22837215	Eastern chimpanzees, but not bonobos, represent a simian immunodeficiency virus reservoir.	J Virol	2012
21775446	High prevalence of simian immunodeficiency virus infection in a community of savanna chimpanzees.	Journal of Virology	2011
19906908	Molecular epidemiology of simian immunodeficiency virus infection in wild-living gorillas.	Journal of Virology	2010
19759238	Novel circular DNA viruses in stool samples of wild-living chimpanzees.	Journal of General Virology	2010