Author details

Full Name

Rituparna Mukhopadhyay

Affiliation

Albert Einstein College of Medicine

ORCID

Career Start Year

2002

Papers

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36507668	Salmonella Subpopulations Identified from Human Specimens Express Heterogenous Phenotypes That Are Relevant to Clinical Diagnosis.	Microbiol Spectr	2023
36990199	Discovery of a novel sub-lineage of multi-drug resistant Shigella flexneri in Southern California.	Int J Infect Dis	2023
31247064	Foodborne Botulism Outbreak Associated With Commercial Nacho Cheese Sauce From a Gas Station Market.	Clin Infect Dis	2020
30061308	Mechanisms of establishment and functional significance of DNA demethylation during erythroid differentiation.	Blood Adv	2018
28592550	Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory.	J Clin Microbiol	2017
28450518	Complete Genome Sequence of a <i>Paenalcaligenes hominis</i> Strain Isolated from a Paraplegic Patient with Neurogenic Bladder Using Single-Molecule Real-Time Sequencing Technology.	Genome Announc	2017
28473398	Complete Genome Sequence of <i>Dolosigranulum pigrum</i> from a Patient with Interstitial Lung Disease Using Single-Molecule Real-Time Sequencing Technology.	Genome Announc	2017
25987481	Allele-specific analysis of DNA replication origins in mammalian cells.	Nat Commun	2015
24565511	Identification of a BET family bromodomain/casein kinase II/TAF-containing complex as a regulator of mitotic condensin function.	Cell Rep	2014
24787348	Allele-specific genome-wide profiling in human primary erythroblasts reveal replication program organization.	PLoS Genet	2014
23741343	Complete genome phasing of family quartet by combination of genetic, physical and population-based phasing analysis.	PLoS One	2013
20305816	BORIS (CTCFL) is not expressed in most human breast cell lines and high grade breast carcinomas.	PLoS One	2010
20569236	p16(INK4a) -mediated suppression of telomerase in normal and malignant human breast cells.	Aging Cell	2010
20146798	Promotion of variant human mammary epithelial cell outgrowth by ionizing radiation: an agent-based model supported by in vitro studies.	Breast Cancer Res	2010
19806010	Telomerase activation by c-Myc in human mammary epithelial cells requires additional genomic changes.	Cell Cycle	2009
17210645	CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide.	Mol Cell Biol	2007
15361875	Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation.	Nat Genet	2004
15256511	The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide.	Genome Res	2004
12511562	Bidirectional silencing and DNA methylation-sensitive methylation-spreading properties of the Kcnq1 imprinting control region map to the same regions.	J Biol Chem	2003
11877438	A differentially methylated imprinting control region within the Kcnq1 locus harbors a methylation-sensitive chromatin insulator.	J Biol Chem	2002

1 - 20 of 20

Marta Gut

Universitat de Barcelona (UB)

Career Start Year 2010

Number of shared co-authors 0

Richard Mitter

The Francis Crick Institute

Career Start Year 2008

Number of shared co-authors 1

Yue Lu

The University of Texas MD Anderson Cancer Center

Career Start Year 2006

Number of shared co-authors 0

Harmen J G van de Werken

Department of Immunology Erasmus University Medical Center

Career Start Year 2006

Number of shared co-authors 1

Jun S Song

University of Illinois at Urbana-Champaign

Career Start Year 2005

Number of shared co-authors 2

Christoph Bock

CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences

Career Start Year 2005

Number of shared co-authors 2

Guillaume J Filion

University of Toronto Scarborough

Career Start Year 2004

Number of shared co-authors 0

Robert Sebra

Icahn School of Medicine at Mount Sinai

Career Start Year 2004

Number of shared co-authors 1

Jianmin Wang

Roswell Park Comprehensive Cancer Center

Career Start Year 2003

Number of shared co-authors 0

Michael J Buck

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

Career Start Year 2002

Number of shared co-authors 3

Peter J Park

Harvard Medical School

Career Start Year 2001

Number of shared co-authors 1

Tarjei S Mikkelsen

Harvard University, USA Broad Institute, USA Harvard Stem Cell Institute

Career Start Year 2001

Number of shared co-authors 1

Jan O Korbel

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2001

Number of shared co-authors 1

Stefan Bekiranov

University of Virginia

Career Start Year 2000

Number of shared co-authors 0

Martin Hirst

University of British Columbia

Career Start Year 1998

Number of shared co-authors 3

Sarah J Wheelan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1998

Number of shared co-authors 0

Colin A Semple

Institute of Genetics and Cancer, University of Edinburgh

Career Start Year 1997

Number of shared co-authors 1

Guillaume Bourque

Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University

Career Start Year 1997

Number of shared co-authors 2

Jay Shendure

University of Washington

Career Start Year 1996

Number of shared co-authors 2

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 2

Bradley E Bernstein

Broad Institute of MIT and Harvard

Career Start Year 1994

Number of shared co-authors 3

Marco A Marra

University of British Columbia

Career Start Year 1993

Number of shared co-authors 2

Aleksandar Milosavljevic

Baylor College of Medicine

Career Start Year 1991

Number of shared co-authors 1

Dieter Weichenhan

German Cancer Research Center (DKFZ)

Career Start Year 1988

Number of shared co-authors 0

Jiannis Ragoussis

McGill University

Career Start Year 1986

Number of shared co-authors 0

Andreas Gnirke

The Center for Genome Architecture, Baylor College of Medicine

Career Start Year 1986

Number of shared co-authors 1

David A Wheeler

Baylor College of Medicine

Career Start Year 1984

Number of shared co-authors 1

Stephan Beck

UCL Cancer Institute, University College London

Career Start Year 1983

Number of shared co-authors 0

Richard K Wilson

The Ohio State University

Career Start Year 1983

Number of shared co-authors 1

Richard M Myers

HudsonAlpha Institute for Biotechnology

Career Start Year 1980

Number of shared co-authors 2

row(s) 1 - 30 of 30

Eric E Bouhassira

Albert Einstein College of Medicine

Co-authored papers 5

Jonathan A Eisen

McLean Hospital

Co-authored papers 2

Mirit I Aladjem

National Cancer Institute, Center for Cancer Research

Co-authored papers 2

Kevin G Hardwick

Institute of Cell Biology, University of Edinburgh

Co-authored papers 1

Andrea C Silva

Albert Einstein College of Medicine

Co-authored papers 1

Brian D Strahl

University of North Carolina

Co-authored papers 1

Jiewei Xu

Quantitative Biosciences Institute (QBI), University of California san francisco

Co-authored papers 1

Leonard K Lee

Co-authored papers 1

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 1

John M Greally

Co-authored papers 1

Hyun-Soo Kim

Wonju Severance Christian Hospital

Co-authored papers 1

Scott B Rothbart

Van Andel Institute

Co-authored papers 1

Thomas Kislinger

Princess Margaret Cancer Centre, University Health Network, University of Toronto

Co-authored papers 1

Masako Suzuki

Co-authored papers 1

Melvenia M Martin

Center for Cancer Research

Co-authored papers 1

Bing Ren

Center for Epigenomics, University of California San Diego

Co-authored papers 1

Assen Roguev

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Co-authored papers 1

Jack F Greenblatt

College Street, University of Toronto

Co-authored papers 1

Vincent Vanoosthuyse

Ecole Normale Superieure de Lyon, CNRS

Co-authored papers 1

Harlizawati Jahari

Co-authored papers 1

Jessica C Mar

Australian Institute for Bioengineering and Nanotechnology, University of Queensland

Co-authored papers 1

Alexander L Greninger

University of Washington Medical Center

Co-authored papers 1

Sylvain V Costes

NASA Ames Research Center

Co-authored papers 1

Ernest Radovani

University of Toronto

Co-authored papers 1

Winfried Edelmann

Albert Einstein College of Medicine

Co-authored papers 1

Jeffrey Fillingham

Toronto Metropolitan University

Co-authored papers 1

Chii Mei Lin

Center for Cancer Research, National Cancer Institute, National Institutes of Health

Co-authored papers 1

Colm J Ryan

University College Dublin

Co-authored papers 1

Michael Ryan

The University of Texas MD Anderson Cancer Center

Co-authored papers 1

Michael-Christopher Keogh

EpiCypher Inc.

Co-authored papers 1

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