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Author Details

Ulrike Kusebauch
Institute for Systems Biology
2003
52
27
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37653270Proteomic changes induced by longevity-promoting interventions in mice.Geroscience2024
37653270Proteomic changes induced by longevity-promoting interventions in mice.Geroscience2024
36912639A Genome-Scale Atlas Reveals Complex Interplay of Transcription and Translation in an Archaeon.mSystems2023
37833331A comprehensive spectral assay library to quantify the Halobacterium salinarum NRC-1 proteome by DIA/SWATH-MS.Sci Data2023
38012377Author Correction: Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.Commun Biol2023
36912639A Genome-Scale Atlas Reveals Complex Interplay of Transcription and Translation in an Archaeon.mSystems2023
37481675Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.Commun Biol2023
38012377Author Correction: Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.Commun Biol2023
37481675Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.Commun Biol2023
37833331A comprehensive spectral assay library to quantify the Halobacterium salinarum NRC-1 proteome by DIA/SWATH-MS.Sci Data2023
35613471Engineered SH2 Domains for Targeted Phosphoproteomics.ACS Chem Biol2022
35613471Engineered SH2 Domains for Targeted Phosphoproteomics.ACS Chem Biol2022
34724830Plasmodium falciparum Calcium-Dependent Protein Kinase 4 is Critical for Male Gametogenesis and Transmission to the Mosquito Vector.mBio2021
33750910Non-responder phenotype reveals apparent microbiome-wide antibiotic tolerance in the murine gut.Commun Biol2021
34724830Plasmodium falciparum Calcium-Dependent Protein Kinase 4 is Critical for Male Gametogenesis and Transmission to the Mosquito Vector.mBio2021
34648730Hallstatt miners consumed blue cheese and beer during the Iron Age and retained a non-Westernized gut microbiome until the Baroque period.Curr Biol2021
33750910Non-responder phenotype reveals apparent microbiome-wide antibiotic tolerance in the murine gut.Commun Biol2021
34648730Hallstatt miners consumed blue cheese and beer during the Iron Age and retained a non-Westernized gut microbiome until the Baroque period.Curr Biol2021
32723790Selective Translation of Low Abundance and Upregulated Transcripts in Halobacterium salinarum.mSystems2020
32074120Lumenal calcification and microvasculopathy in fetuin-A-deficient mice lead to multiple organ morbidity.PLoS One2020
33184295A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS.Sci Data2020
33067471DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics.Nat Commun2020
33067450A high-stringency blueprint of the human proteome.Nat Commun2020
33166149Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project.J Proteome Res2020
32723790Selective Translation of Low Abundance and Upregulated Transcripts in Halobacterium salinarum.mSystems2020
32074120Lumenal calcification and microvasculopathy in fetuin-A-deficient mice lead to multiple organ morbidity.PLoS One2020
33166149Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project.J Proteome Res2020
33184295A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS.Sci Data2020
33067471DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics.Nat Commun2020
33067450A high-stringency blueprint of the human proteome.Nat Commun2020
31290668PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline.J Proteome Res2019
31290668PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline.J Proteome Res2019
29655560Selected reaction monitoring mass spectrometry of mastitis milk reveals pathogen-specific regulation of bovine host response proteins.J Dairy Sci2018
30017480The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals.Curr Biol2018
29655560Selected reaction monitoring mass spectrometry of mastitis milk reveals pathogen-specific regulation of bovine host response proteins.J Dairy Sci2018
30017480The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals.Curr Biol2018
28887440A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions.Sci Rep2017
28887440A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions.Sci Rep2017
28714965A wellness study of 108 individuals using personal, dense, dynamic data clouds.Nat Biotechnol2017
28135259Building ProteomeTools based on a complete synthetic human proteome.Nat Methods2017
28135259Building ProteomeTools based on a complete synthetic human proteome.Nat Methods2017
28714965A wellness study of 108 individuals using personal, dense, dynamic data clouds.Nat Biotechnol2017
26918674Temperature- and Photocontrolled Unfolding/Folding of a Triple-Helical Azobenzene-Stapled Collagen Peptide Monitored by Infrared Spectroscopy.Chemphyschem2016
26744403The 5300-year-old Helicobacter pylori genome of the Iceman.Science2016
26918674Temperature- and Photocontrolled Unfolding/Folding of a Triple-Helical Azobenzene-Stapled Collagen Peptide Monitored by Infrared Spectroscopy.Chemphyschem2016
26719571Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays.Clin Chem2016
27453469Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome.Cell2016
26449608RNA Sequencing Identifies Novel Translational Biomarkers of Kidney Fibrosis.J Am Soc Nephrol2016
26704149Opening a SWATH Window on Posttranslational Modifications: Automated Pursuit of Modified Peptides.Mol Cell Proteomics2016
27575953Identification of Organ-Enriched Protein Biomarkers of Acute Liver Injury by Targeted Quantitative Proteomics of Blood in Acetaminophen- and Carbon-Tetrachloride-Treated Mouse Models and Acetaminophen Overdose Patients.J Proteome Res2016
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Collaborators

Institute for Systems Biology
Co-authored papers 45
Institute for Systems Biology
Co-authored papers 13
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 12
Co-authored papers 12
Institute for Systems Biology
Co-authored papers 12
Center for Phenomic Health, The Buck Institute for Research on Aging
Co-authored papers 6
and School of Public Health, University of Michigan ann arbor
Co-authored papers 6
Co-authored papers 5
Institute for Systems Biology
Co-authored papers 4
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 3
Smidt Heart Institute, Cedars-Sinai Medical Center
Co-authored papers 3
Oregon Health & Science University
Co-authored papers 3
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 3
University of Texas Health Science Center at San Antonio Texas78229 USA.
Co-authored papers 3
School of Public Health, Oregon Health & Science University-Portland State University
Co-authored papers 3
ETH Zurich
Co-authored papers 3
Institute for Systems Biology
Co-authored papers 3
Co-authored papers 3
College of Life Sciences and Biotechnology, Yonsei University
Co-authored papers 2
Co-authored papers 2
Institute for Systems Biology
Co-authored papers 2
University of California
Co-authored papers 2
University of British Columbia
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
University of Michigan School of Medicine ann arbor
Co-authored papers 2
Macquarie University
Co-authored papers 2
University of California San Diego
Co-authored papers 2
Institute for Systems Biology
Co-authored papers 2
University Grenoble Alpes, INSERM, CNRS
Co-authored papers 2