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Author Details

Cornelis Murre
University of California
1982
174
77
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36909629Active maintenance of CD8<sup>+</sup> T cell naïvety through regulation of global genome architecture.bioRxiv2023
37858463Active maintenance of CD8<sup>+</sup> T cell naivety through regulation of global genome architecture.Cell Rep2023
37423592Transcriptional network governing extraembryonic endoderm cell fate choice.Dev Biol2023
35749363A proposed unified interphase nucleus chromosome structure: Preliminary preponderance of evidence.Proc Natl Acad Sci U S A2022
35544689A proposed unified mitotic chromosome architecture.Proc Natl Acad Sci U S A2022
35634342Helix-Loop-Helix Proteins in Adaptive Immune Development.Front Immunol2022
33334824Calcium signaling instructs NIPBL recruitment at active enhancers and promoters via distinct mechanisms to reconstruct genome compartmentalization.Genes Dev2021
33854505Spatial Organization of Chromatin: Transcriptional Control of Adaptive Immune Cell Development.Front Immunol2021
33535043The E protein-TCF1 axis controls γδ T cell development and effector fate.Cell Rep2021
33503413FOXO1 constrains activation and regulates senescence in CD8 T cells.Cell Rep2021
34860551Bursty gene expression and mRNA decay pathways orchestrate B cell activation.Sci Adv2021
34750254A regulatory network of microRNAs confers lineage commitment during early developmental trajectories of B and T lymphocytes.Proc Natl Acad Sci U S A2021
32268089Plasma Cell Fate Is Orchestrated by Elaborate Changes in Genome Compartmentalization and Inter-chromosomal Hubs.Cell Rep2020
31919189Upon microbial challenge, human neutrophils undergo rapid changes in nuclear architecture and chromatin folding to orchestrate an immediate inflammatory gene program.Genes Dev2020
32826341Heterogeneity and clonal relationships of adaptive immune cells in ulcerative colitis revealed by single-cell analyses.Sci Immunol2020
32610145Plasma Cell Fate Is Orchestrated by Elaborate Changes in Genome Compartmentalization and Inter-chromosomal Hubs.Cell Rep2020
32414833Early precursors and molecular determinants of tissue-resident memory CD8<sup>+</sup> T lymphocytes revealed by single-cell RNA sequencing.Sci Immunol2020
30449725A B-Cell-Specific Enhancer Orchestrates Nuclear Architecture to Generate a Diverse Antigen Receptor Repertoire.Mol Cell2019
31235807Chromosome dynamics near the sol-gel phase transition dictate the timing of remote genomic interactions.Nat Commun2019
31444302Molecular organization of mammalian meiotic chromosome axis revealed by expansion STORM microscopy.Proc Natl Acad Sci U S A2019
31085655CHD4 is essential for transcriptional repression and lineage progression in B lymphopoiesis.Proc Natl Acad Sci U S A2019
30602438Helix-loop-helix proteins and the advent of cellular diversity: 30 years of discovery.Genes Dev2019
29348498mTECs Aire on the side of caution.Nat Immunol2018
29449365'Big bang' of B-cell development revealed.Genes Dev2018
29416542Id Proteins Suppress E2A-Driven Invariant Natural Killer T Cell Development prior to TCR Selection.Front Immunol2018
28514688The E-Id Protein Axis Specifies Adaptive Lymphoid Cell Identity and Suppresses Thymic Innate Lymphoid Cell Development.Immunity2017
28167501Comprehensive characterization of neutrophil genome topology.Genes Dev2017
28938112Non-coding Transcription Instructs Chromatin Folding and Compartmentalization to Dictate Enhancer-Promoter Communication and T Cell Fate.Cell2017
28813658CCCTC-Binding Factor Translates Interleukin 2- and α-Ketoglutarate-Sensitive Metabolic Changes in T Cells into Context-Dependent Gene Programs.Immunity2017
27457619Id3 Orchestrates Germinal Center B Cell Development.Mol Cell Biol2016
26488117Cellular and chromatin dynamics of antibody-secreting plasma cells.Wiley Interdiscip Rev Dev Biol2016
26384565Nuclear positioning rather than contraction controls ordered rearrangements of immunoglobulin loci.Nucleic Acids Res2016
25582312Ensuring an equal playing field for antigen receptor loci variable regions.J Exp Med2015
26590414A Common Mechanism that Underpins Antibody Diversification.Cell2015
26477372Preface.Adv Immunol2015
26417104New roles for DNA cytosine modification, eRNA, anchors, and superanchors in developing B cell progenitors.Proc Natl Acad Sci U S A2015
26254147AID targeting: old mysteries and new challenges.Trends Immunol2015
25985234The chromatin remodeler Brg1 activates enhancer repertoires to establish B cell identity and modulate cell growth.Nat Immunol2015
25691468The E-Id protein axis modulates the activities of the PI3K-AKT-mTORC1-Hif1a and c-myc/p19Arf pathways to suppress innate variant TFH cell development, thymocyte expansion, and lymphomagenesis.Genes Dev2015
24679436The establishment of B versus T cell identity.Trends Immunol2014
25483777B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity.Cell2014
24973820Id2 and Id3 maintain the regulatory T cell pool to suppress inflammatory disease.Nat Immunol2014
249989313D trajectories adopted by coding and regulatory DNA elements: first-passage times for genomic interactions.Cell2014
23266214Nuclear location and the control of developmental progression.Curr Opin Genet Dev2013
24092471The epigenetics of early lymphocyte development.Cold Spring Harb Symp Quant Biol2013
24240153A HESitant decision for T cells.Nat Immunol2013
23809155Boosting lymphocyte production.Immunity2013
22354994Biochemical and phosphoproteomic analysis of the helix-loop-helix protein E47.Mol Cell Biol2012
23213261Positive intergenic feedback circuitry, involving EBF1 and FOXO1, orchestrates B-cell fate.Proc Natl Acad Sci U S A2012
23159226β-Selection-induced proliferation is required for αβ T cell differentiation.Immunity2012
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Collaborators

Harvard Medical School
Co-authored papers 13
Baylor Institute for Immunology Research
Co-authored papers 12
Tokyo University of Science
Co-authored papers 7
Michigan State University College of Human Medicine
Co-authored papers 7
Karolinska Institutet
Co-authored papers 6
Institute for Life and Medical Sciences, Kyoto University
Co-authored papers 6
University of California San Diego
Co-authored papers 6
Genentech Inc.
Co-authored papers 5
Baylor College of Medicine
Co-authored papers 5
University of California
Co-authored papers 4
University of California San Diego
Co-authored papers 4
Co-authored papers 4
Lund University, Linkoping University. .
Co-authored papers 4
U.C. San Diego School of Medicine
Co-authored papers 3
National Jewish Health
Co-authored papers 3
Center for Computational Biology and Bioinformatics, University of California
Co-authored papers 2
Co-authored papers 2
University of California
Co-authored papers 2
University of California San Diego
Co-authored papers 2
Co-authored papers 2
Oregon Health & Science University
Co-authored papers 2
Institute for Advanced Biosciences, Keio University
Co-authored papers 2
University of California
Co-authored papers 2
Fox Chase Cancer Center
Co-authored papers 2
Data4Cure Inc.
Co-authored papers 2
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University of California San Diego
Co-authored papers 2
Buck Institute for Research on Aging
Co-authored papers 1
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Co-authored papers 1