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Author Details

Domenico Cozzetto
Imperial College London
2005
32
21
PMIDPaper TitleJournal TitlePublished Year
37219943Tumor-activated lymph node fibroblasts suppress T cell function in diffuse large B cell lymphoma.J Clin Invest2023
37563310Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets.Nat Immunol2023
36192482Interleukin-22 regulates neutrophil recruitment in ulcerative colitis and is associated with resistance to ustekinumab therapy.Nat Commun2022
36170836Cytokine responsive networks in human colonic epithelial organoids unveil a molecular classification of inflammatory bowel disease.Cell Rep2022
35028614TGF-β1 potentiates Vγ9Vδ2 T cell adoptive immunotherapy of cancer.Cell Rep Med2021
33149188Cancer-associated hypersialylated MUC1 drives the differentiation of human monocytes into macrophages with a pathogenic phenotype.Commun Biol2020
31792136Interleukin-22 orchestrates a pathological endoplasmic reticulum stress response transcriptional programme in colonic epithelial cells.Gut2020
31335894Using deep maxout neural networks to improve the accuracy of function prediction from protein interaction networks.PLoS One2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
29889900Predicting human protein function with multi-task deep neural networks.PLoS One2018
27812935Computational Methods for Annotation Transfers from Sequence.Methods Mol Biol2017
27561554FFPred 3: feature-based function prediction for all Gene Ontology domains.Sci Rep2016
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
25391399DISOPRED3: precise disordered region predictions with annotated protein-binding activity.Bioinformatics2015
25348407Genome3D: exploiting structure to help users understand their sequences.Nucleic Acids Res2015
23900810Evaluation of predictions in the CASP10 model refinement category.Proteins2014
23353650A large-scale evaluation of computational protein function prediction.Nat Methods2013
23717476FFPred 2.0: improved homology-independent prediction of gene ontology terms for eukaryotic protein sequences.PLoS One2013
23466039The contribution of intrinsic disorder prediction to the elucidation of protein function.Curr Opin Struct Biol2013
23514099Protein function prediction by massive integration of evolutionary analyses and multiple data sources.BMC Bioinformatics2013
22101153PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments.Bioinformatics2012
19714774Evaluation of CASP8 model quality predictions.Proteins2009
19731382Evaluation of template-based models in CASP8 with standard measures.Proteins2009
18075161The assessment of methods for protein structure prediction.Methods Mol Biol2008
19075747Advances and pitfalls in protein structure prediction.Curr Protein Pept Sci2008
18071927The evaluation of protein structure prediction results.Mol Biotechnol2008
17430199Computer-assisted protein domain boundary prediction using the DomPred server.Curr Protein Pept Sci2007
17680695Assessment of predictions in the model quality assessment category.Proteins2007
16381873The PMDB Protein Model Database.Nucleic Acids Res2006
16623953An analysis of the Sargasso Sea resource and the consequences for database composition.BMC Bioinformatics2006
15495137Relationship between multiple sequence alignments and quality of protein comparative models.Proteins2005
15691322Ten years of predictions ... and counting.FEBS J2005
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Collaborators

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Sapienza University of Rome
Co-authored papers 11
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Co-authored papers 4
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Co-authored papers 4
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Indiana University
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Spanish National Cancer Research Centre (CNIO)
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University of Bristol
Co-authored papers 3
Stefano Toppo
University of Padova
Co-authored papers 3
Patricia C Babbitt
University of California san francisco
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Ian Sillitoe
University College London
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Asa Ben-Hur
Colorado State University
Co-authored papers 3
Michal Linial
Institute of Life Sciences, The Hebrew University of Jerusalem
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Daisuke Kihara
Purdue University
Co-authored papers 3
Iddo Friedberg
Iowa State University
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Steven E Brenner
University of California berkeley
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Rui Fa
University College London
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Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
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