Author details

Full Name

Florian Hahne

Affiliation

1 Preclinical Safety, Novartis Institutes for Biomedical Research

ORCID

Career Start Year

2005

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
27932582	Translational Safety Genetics.	Toxicol Pathol	2017
27932582	Translational Safety Genetics.	Toxicol Pathol	2017
27008022	Visualizing Genomic Data Using Gviz and Bioconductor.	Methods Mol Biol	2016
27008022	Visualizing Genomic Data Using Gviz and Bioconductor.	Methods Mol Biol	2016
26855684	Reciprocal changes in DNA methylation and hydroxymethylation and a broad repressive epigenetic switch characterize FMR1 transcriptional silencing in fragile X syndrome.	Clin Epigenetics	2016
26855684	Reciprocal changes in DNA methylation and hydroxymethylation and a broad repressive epigenetic switch characterize FMR1 transcriptional silencing in fragile X syndrome.	Clin Epigenetics	2016
25417205	QuasR: quantification and annotation of short reads in R.	Bioinformatics	2015
25633503	Orchestrating high-throughput genomic analysis with Bioconductor.	Nat Methods	2015
25417205	QuasR: quantification and annotation of short reads in R.	Bioinformatics	2015
25633503	Orchestrating high-throughput genomic analysis with Bioconductor.	Nat Methods	2015
23091169	Identification of Dlk1-Dio3 imprinted gene cluster noncoding RNAs as novel candidate biomarkers for liver tumor promotion.	Toxicol Sci	2013
23091169	Identification of Dlk1-Dio3 imprinted gene cluster noncoding RNAs as novel candidate biomarkers for liver tumor promotion.	Toxicol Sci	2013
23300973	Heart structure-specific transcriptomic atlas reveals conserved microRNA-mRNA interactions.	PLoS One	2013
23300973	Heart structure-specific transcriptomic atlas reveals conserved microRNA-mRNA interactions.	PLoS One	2013
22050465	Computational methods for early predictive safety assessment from biological and chemical data.	Expert Opin Drug Metab Toxicol	2011
22050465	Computational methods for early predictive safety assessment from biological and chemical data.	Expert Opin Drug Metab Toxicol	2011
19899135	Per-channel basis normalization methods for flow cytometry data.	Cytometry A	2010
19899135	Per-channel basis normalization methods for flow cytometry data.	Cytometry A	2010
19442304	flowClust: a Bioconductor package for automated gating of flow cytometry data.	BMC Bioinformatics	2009
19442304	flowClust: a Bioconductor package for automated gating of flow cytometry data.	BMC Bioinformatics	2009
19358741	flowCore: a Bioconductor package for high throughput flow cytometry.	BMC Bioinformatics	2009
20049160	iFlow: A Graphical User Interface for Flow Cytometry Tools in Bioconductor.	Adv Bioinformatics	2009
19956418	Analysis of High-Throughput Flow Cytometry Data Using plateCore.	Adv Bioinformatics	2009
19956418	Analysis of High-Throughput Flow Cytometry Data Using plateCore.	Adv Bioinformatics	2009
20049160	iFlow: A Graphical User Interface for Flow Cytometry Tools in Bioconductor.	Adv Bioinformatics	2009
19358741	flowCore: a Bioconductor package for high throughput flow cytometry.	BMC Bioinformatics	2009
17724469	Reduced expression of vacuole membrane protein 1 affects the invasion capacity of tumor cells.	Oncogene	2008
17724469	Reduced expression of vacuole membrane protein 1 affects the invasion capacity of tumor cells.	Oncogene	2008
18177498	Extending pathways based on gene lists using InterPro domain signatures.	BMC Bioinformatics	2008
18177498	Extending pathways based on gene lists using InterPro domain signatures.	BMC Bioinformatics	2008
17478479	High-throughput flow cytometry-based assay to identify apoptosis-inducing proteins.	J Biomol Screen	2007
17478479	High-throughput flow cytometry-based assay to identify apoptosis-inducing proteins.	J Biomol Screen	2007
16381901	The LIFEdb database in 2006.	Nucleic Acids Res	2006
17946776	Modeling breast cell cycle regulation--overcoming drug resistance.	Conf Proc IEEE Eng Med Biol Soc	2006
16916453	Statistical methods and software for the analysis of highthroughput reverse genetic assays using flow cytometry readouts.	Genome Biol	2006
16381901	The LIFEdb database in 2006.	Nucleic Acids Res	2006
17946776	Modeling breast cell cycle regulation--overcoming drug resistance.	Conf Proc IEEE Eng Med Biol Soc	2006
16916453	Statistical methods and software for the analysis of highthroughput reverse genetic assays using flow cytometry readouts.	Genome Biol	2006
16140941	Functional profiling: from microarrays via cell-based assays to novel tumor relevant modulators of the cell cycle.	Cancer Res	2005
16140941	Functional profiling: from microarrays via cell-based assays to novel tumor relevant modulators of the cell cycle.	Cancer Res	2005

1 - 40 of 40

Lukas M Weber

Johns Hopkins Bloomberg School of Public Health

Career Start Year 2014

Number of shared co-authors 1

Ludwig Geistlinger

Center for Computational Biomedicine, Harvard Medical School

Career Start Year 2008

Number of shared co-authors 10

Joshua W K Ho

The University of Hong Kong

Career Start Year 2006

Number of shared co-authors 0

Matti Nykter

Prostate Cancer Research Center, Tampere University and Tays Cancer Center

Career Start Year 2006

Number of shared co-authors 0

Arnaud Droit

Centre de Recherche du CHU de Quebec-Universite, Universite Laval

Career Start Year 2005

Number of shared co-authors 4

Avi Ma'ayan

Icahn School of Medicine at Mount Sinai

Career Start Year 2005

Number of shared co-authors 0

Shannan J Ho Sui

Harvard T.H. Chan School of Public Health

Career Start Year 2004

Number of shared co-authors 2

Nathalie Pochet

Broad Institute of MIT and Harvard

Career Start Year 2004

Number of shared co-authors 1

F??tima Al-Shahrour

Spanish National Cancer Research Centre (CNIO)

Career Start Year 2003

Number of shared co-authors 1

Zhandong Liu

Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital

Career Start Year 2003

Number of shared co-authors 1

Ted Laderas

Oregon Health & Science University

Career Start Year 2003

Number of shared co-authors 0

Olivier Elemento

Meyer Cancer Center

Career Start Year 2002

Number of shared co-authors 1

Syed Haider

Institute of Cancer Research

Career Start Year 2002

Number of shared co-authors 0

Ruth Isserlin

University of Toronto

Career Start Year 2002

Number of shared co-authors 0

Jean Yee Hwa Yang

The University of Sydney

Career Start Year 2001

Number of shared co-authors 5

Mikhail G Dozmorov

Virginia Commonwealth University

Career Start Year 2001

Number of shared co-authors 1

Gary D Bader

University of Toronto

Career Start Year 2000

Number of shared co-authors 2

Hedi Peterson

Institute of Computer Science, University of Tartu

Career Start Year 2000

Number of shared co-authors 1

Tero Aittokallio

Institute for Molecular Medicine Finland (FIMM), University of Helsinki

Career Start Year 1999

Number of shared co-authors 2

Ralf Herwig

Max Planck Institute for Molecular Genetics

Career Start Year 1998

Number of shared co-authors 1

Igor Jurisica

Schroeder Arthritis Institute

Career Start Year 1998

Number of shared co-authors 1

Shannon K McWeeney

Oregon Health & Science University, University of California Berkeley

Career Start Year 1997

Number of shared co-authors 4

Benedikt Brors

German Cancer Research Center (DKFZ)

Career Start Year 1997

Number of shared co-authors 6

Mark D Robinson

University of Zurich

Career Start Year 1997

Number of shared co-authors 5

Roland Eils

Berlin Institute of Health (BIH) and Charite

Career Start Year 1995

Number of shared co-authors 6

Jill P Mesirov

University of California San Diego

Career Start Year 1992

Number of shared co-authors 3

Kevin R Coombes

Medical College of Georgia

Career Start Year 1990

Number of shared co-authors 0

John Quackenbush

Harvard T. H. Chan School of Public Health

Career Start Year 1989

Number of shared co-authors 10

Yuval Kluger

Yale University School of Medicine

Career Start Year 1984

Number of shared co-authors 0

Rainer Spang

University of Regensburg

Career Start Year 1969

Number of shared co-authors 0

row(s) 1 - 30 of 30

Stefan Wiemann

Co-authored papers 7

Wolfgang Huber

Technische Universitat Munchen

Co-authored papers 5

Robert Gentleman

Center for Computational Biomedicine, Harvard Medical School

Co-authored papers 4

Ryan R Brinkman

University of British Columbia

Co-authored papers 4

Alexander Mehrle

Co-authored papers 3

Heiko Rosenfelder

Co-authored papers 3

Raphael Gottardo

Fred Hutchinson Cancer Center

Co-authored papers 2

Rainer Pepperkok

Translational Lung Research Center Heidelberg, German Center for Lung Research

Co-authored papers 2

Jeremy C Simpson

UCD Conway Institute of Biomolecular and Biomedical Science

Co-authored papers 2

Holger S??ltmann

German Cancer Research Center (DKFZ)

Co-authored papers 2

Deepayan Sarkar

All India Institute of Medical Sciences

Co-authored papers 2

Philippe Couttet

Co-authored papers 2

Valerie Obenchain

Fred Hutchinson Cancer Research Center

Co-authored papers 1

James W MacDonald

University of Washington

Co-authored papers 1

Winston Hide

Harvard Medical School

Co-authored papers 1

Alejandro Reyes

Dana-Farber Cancer Institute

Co-authored papers 1

Ali Bashashati

University of British Columbia

Co-authored papers 1

Thomas Girke

Institute for Integrative Genome Biology, University of California Riverside

Co-authored papers 1

Michael Lawrence

Center for Cancer Research, Massachusetts General Hospital, Harvard Medical School

Co-authored papers 1

Oliver Hofmann

University of Melbourne

Co-authored papers 1

Paul Shannon

Institute for Systems Biology

Co-authored papers 1

Martin Morgan

Roswell Park Comprehensive Cancer Center

Co-authored papers 1

Richard R Meehan

Institute of Genetics and Molecular Medicine, University of Edinburgh

Co-authored papers 1

Marc Carlson

Fred Hutchinson Cancer Research Center

Co-authored papers 1

Levi Waldron

City University of New York School of Public Health

Co-authored papers 1

Laszlo Urban

Matrahaza University and Teaching Hospital

Co-authored papers 1

Simon Anders

Heidelberg University

Co-authored papers 1

Vincent J Carey

Brigham and Women's Hospital, Harvard Medical School

Co-authored papers 1

Michael I Love

University of North Carolina at Chapel Hill

Co-authored papers 1

Dan Tenenbaum

Fred Hutchinson Cancer Research Center

Co-authored papers 1

1 - 30

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