Author details

Full Name

Jeffrey M Trimarchi

Affiliation

Inc., Lehigh University

ORCID

Career Start Year

1994

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36681898	Bivalent intra-spike binding provides durability against emergent Omicron lineages: Results from a global consortium.	Cell Rep	2023
32614138	Repeated evolution of eye loss in Mexican cavefish: Evidence of similar developmental mechanisms in independently evolved populations.	J Exp Zool B Mol Dev Evol	2020
33313337	AAV vectors engineered to target insulin receptor greatly enhance intramuscular gene delivery.	Mol Ther Methods Clin Dev	2020
31673015	Molecular signatures of retinal ganglion cells revealed through single cell profiling.	Sci Rep	2019
30208054	The Trim family of genes and the retina: Expression and functional characterization.	PLoS One	2018
30165106	ALS-associated genes display CNS expression in the developing zebrafish.	Gene Expr Patterns	2018
28510275	Single cell transcriptome profiling of developing chick retinal cells.	J Comp Neurol	2017
28570514	Single-cell RNA-Seq of Defined Subsets of Retinal Ganglion Cells.	J Vis Exp	2017
26949938	Polo-Like Kinase 3 Appears Dispensable for Normal Retinal Development Despite Robust Embryonic Expression.	PLoS One	2016
27587658	Complementary feature selection from alternative splicing events and gene expression for phenotype prediction.	Bioinformatics	2016
27571192	Disentangling neural cell diversity using single-cell transcriptomics.	Nat Neurosci	2016
27274060	Transplantation of iPSC-derived TM cells rescues glaucoma phenotypes in vivo.	Proc Natl Acad Sci U S A	2016
26982811	Expression Profiling of Developing Zebrafish Retinal Cells.	Zebrafish	2016
26484186	Transcriptomic analyses of Onecut1 and Onecut2 deficient retinas.	Genom Data	2015
24411174	Making of a retinal cell: insights into retinal cell-fate determination.	Int Rev Cell Mol Biol	2014
25313862	Onecut1 and Onecut2 play critical roles in the development of the mouse retina.	PLoS One	2014
24870805	Loss of gq/11 genes does not abolish melanopsin phototransduction.	PLoS One	2014
23813500	Analysis of gene expression in wild-type and Notch1 mutant retinal cells by single cell profiling.	Dev Dyn	2013
23867227	Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.	Dev Cell	2013
23673197	Plasma-seq: a novel strategy for metastatic prostate cancer analysis.	Genome Med	2013
22546911	Single-cell profiling of developing and mature retinal neurons.	J Vis Exp	2012
22871714	Transcriptome sequencing of single cells with Smart-Seq.	Nat Biotechnol	2012
22543161	Transcription factor Olig2 defines subpopulations of retinal progenitor cells biased toward specific cell fates.	Proc Natl Acad Sci U S A	2012
21840489	Coexpression of normally incompatible developmental pathways in retinoblastoma genesis.	Cancer Cell	2011
19470466	Development and diversification of retinal amacrine interneurons at single cell resolution.	Proc Natl Acad Sci U S A	2009
19449303	Identification of genes expressed preferentially in the developing peripheral margin of the optic cup.	Dev Dyn	2009
18270576	Individual retinal progenitor cells display extensive heterogeneity of gene expression.	PLoS One	2008
18854032	Thyroid hormone components are expressed in three sequential waves during development of the chick retina.	BMC Dev Biol	2008
18987029	Temporal requirement of the alternative-splicing factor Sfrs1 for the survival of retinal neurons.	Development	2008
18465787	The transcriptome of retinal MÃ¼ller glial cells.	J Comp Neurol	2008
18513391	Validation of oligoarrays for quantitative exploration of the transcriptome.	BMC Genomics	2008
18260140	Identification of molecular markers of bipolar cells in the murine retina.	J Comp Neurol	2008
17444492	Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling.	J Comp Neurol	2007
17555589	Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates.	BMC Genomics	2007
17277333	Automatic correspondence of tags and genes (ACTG): a tool for the analysis of SAGE, MPSS and SBS data.	Bioinformatics	2007
16823376	A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.	Nat Biotechnol	2006
15465482	A primer on gene expression and microarrays for machine learning researchers.	J Biomed Inform	2004
15226823	Genomic analysis of mouse retinal development.	PLoS Biol	2004
11823794	Sibling rivalry in the E2F family.	Nat Rev Mol Cell Biol	2002
11171983	The E2F6 transcription factor is a component of the mammalian Bmi1-containing polycomb complex.	Proc Natl Acad Sci U S A	2001
10733529	E2f3 is critical for normal cellular proliferation.	Genes Dev	2000
10983976	E2F4 is essential for normal erythrocyte maturation and neonatal viability.	Mol Cell	2000
9501179	E2F-6, a member of the E2F family that can behave as a transcriptional repressor.	Proc Natl Acad Sci U S A	1998
8770582	Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli.	Genetics	1996
30577325	Conjugation Is Not Required for Adaptive Reversion of an Episomal Frameshift Mutation in <i>Escherichia coli</i>.	J Bacteriol	1996
7644519	Proofreading-defective DNA polymerase II increases adaptive mutation in Escherichia coli.	Proc Natl Acad Sci U S A	1995
7592449	Conjugation is not required for adaptive reversion of an episomal frameshift mutation in Escherichia coli.	J Bacteriol	1995
7777535	Adaptive reversion of an episomal frameshift mutation in Escherichia coli requires conjugal functions but not actual conjugation.	Proc Natl Acad Sci U S A	1995
8023164	Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs.	Science	1994

1 - 49 of 49

Rabi Murad

Sanford Burnham Prebys Medical Discovery Institute

Career Start Year 2014

Number of shared co-authors 2

Cavit Agca

Sabanci University

Career Start Year 2006

Number of shared co-authors 0

Loyal A Goff

Johns Hopkins University School of Medicine

Career Start Year 2004

Number of shared co-authors 1

Marek Pacal

Lunenfeld-Tanenbaum Research Institute

Career Start Year 2004

Number of shared co-authors 0

Shintaro Katayama

Folkhalsan Research Center

Career Start Year 2003

Number of shared co-authors 0

Todd E Scheetz

the University of Iowa Carver College of Medicine

Career Start Year 2000

Number of shared co-authors 3

Bingbing Yuan

Whitehead Institute for Biomedical Research

Career Start Year 2000

Number of shared co-authors 0

Xiuqian Mu

University at Buffalo, State University of New York

Career Start Year 1998

Number of shared co-authors 0

Takae Kiyama

University of Texas Health Science Center at Houston Medical School

Career Start Year 1998

Number of shared co-authors 0

Joshua S Kaminker

Genentech Inc.

Career Start Year 1998

Number of shared co-authors 0

Andrew S McCallion

Johns Hopkins University School of Medicine

Career Start Year 1996

Number of shared co-authors 0

Sten Linnarsson

Karolinska Institute

Career Start Year 1995

Number of shared co-authors 0

Robert A Cornell

University of Iowa

Career Start Year 1994

Number of shared co-authors 0

Tiffany A Cook

Wayne State University School of Medicine

Career Start Year 1994

Number of shared co-authors 0

Semil P Choksi

University of California, USA Cardiovascular Research Institute san francisco

Career Start Year 1994

Number of shared co-authors 0

Stacie K Loftus

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1993

Number of shared co-authors 0

Rod Bremner

University of Toronto

Career Start Year 1990

Number of shared co-authors 2

Roseline Godbout

University of Alberta

Career Start Year 1981

Number of shared co-authors 0

Robert W Williams

Mayo Clinic

Career Start Year 1981

Number of shared co-authors 0

Nathaniel Heintz

Howard Hughes Medical Institute, The Rockefeller University

Career Start Year 1980

Number of shared co-authors 1

Donald J Zack

Johns Hopkins University School of Medicine

Career Start Year 1980

Number of shared co-authors 2

Richard L Maas

Brigham and Women's Hospital, Harvard Medical School

Career Start Year 1980

Number of shared co-authors 2

Itai Yanai

Institute for Systems Genetics NYU Grossman School of Medicine

Career Start Year 1977

Number of shared co-authors 0

Claude Desplan

New York University

Career Start Year 1977

Number of shared co-authors 0

Barbara J Wold

Merkin Institute for Translational Research, California Institute of Technology

Career Start Year 1976

Number of shared co-authors 1

Bruce J Aronow

Cincinnati Children's Hospital Medical Center

Career Start Year 1975

Number of shared co-authors 1

William H Klein

Columbia University

Career Start Year 1972

Number of shared co-authors 0

Thomas Brody

National Institutes of Health (NIH)

Career Start Year 1970

Number of shared co-authors 1

Anand Swaroop

National Eye Institute, National Institutes of Health

Career Start Year 1967

Number of shared co-authors 2

William J Pavan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1963

Number of shared co-authors 0

row(s) 1 - 30 of 30

Constance L Cepko

Howard Hughes Medical Institute, Harvard Medical School

Co-authored papers 16

Lucila Ohno-Machado

Co-authored papers 6

Lucila Ohno-Machado

Escola de Administracao de Empresas - FGV, Stanford University, University of California San Diego, University of Sao Paulo, Yale School of Medicine

Co-authored papers 6

Winston Patrick Kuo

Harvard School of Dental Medicine

Co-authored papers 6

Claudio Punzo

University of Massachusetts Medical School

Co-authored papers 4

Eivind Hovig

Center for Bioinformatics, University of Oslo

Co-authored papers 3

Fang Liu

Institute for Cancer Research, Norwegian Radium Hospital

Co-authored papers 3

Tor-Kristian Jenssen

Norwegian University of Science and Technology

Co-authored papers 3

Sanjiv Harpavat

Baylor College of Medicine

Co-authored papers 2

Seo-Hee Cho

Lewis Katz School of Medicine, Temple University

Co-authored papers 2

Daniel J Park

Broad Institute of MIT and Harvard

Co-authored papers 1

Rachel L Yung

University of Washington

Co-authored papers 1

Budd A Tucker

the University of Iowa Carver College of Medicine

Co-authored papers 1

George M Church

Harvard Medical School

Co-authored papers 1

Xiaowei Wang

Washington University School of Medicine

Co-authored papers 1

Elizabeth Asch

From the University of Pennsylvania (DAA, and the Johns Hopkins University (SVD)

Co-authored papers 1

Ashutosh P Jadhav

Barrow Neurological Institute, St Joseph's Hospital and Medical Center

Co-authored papers 1

Heidi Lyng

Radiumhospitalet, Oslo University Hosptial

Co-authored papers 1

Pedro A F Galante

Hospital Sirio Libanes

Co-authored papers 1

Val C Sheffield

Carver College of Medicine, University of Iowa

Co-authored papers 1

Arnoldo Frigessi

University of Oslo

Co-authored papers 1

Glenn F Short

University of Virginia

Co-authored papers 1

Steven Perrin

ALS Therapy Development Institute

Co-authored papers 1

Bjoern Peters

University of Washington School of Medicine

Co-authored papers 1

Julien Sage

Department of Pediatrics Stanford University Stanford California USA.

Co-authored papers 1

Peter J Park

Harvard Medical School

Co-authored papers 1

Mark E Whipple

University of Washington School of Medicine

Co-authored papers 1

Michael J Lombardi

Co-authored papers 1

Jocelyn F Burke

Kirk Kerkorian School of Medicine of University of Nevada

Co-authored papers 1

Roger E Bumgarner

University of Washington

Co-authored papers 1

1 - 30

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