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Author Details

Doug Stryke
University of California San Francisco
2002
45
30
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
33169017Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids.Nat Med2021
32958861Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination.Sci Rep2020
33112933Rapid deployment of SARS-CoV-2 testing: The CLIAHUB.PLoS Pathog2020
30992304Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid.Genome Res2019
31189036Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis.N Engl J Med2019
26856248Transcriptomic variation of pharmacogenes in multiple human tissues and lymphoblastoid cell lines.Pharmacogenomics J2017
29269933Nanopore DNA Sequencing and Genome Assembly on the International Space Station.Sci Rep2017
28930022Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.Emerg Infect Dis2017
25837569A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study.Lancet Infect Dis2015
26416663Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.Genome Med2015
24271399The Structure-Function Linkage Database.Nucleic Acids Res2014
22231567Genetic and epigenetic regulation of the organic cation transporter 3, SLC22A3.Pharmacogenomics J2013
21368754Functional characterization of liver enhancers that regulate drug-associated transporters.Clin Pharmacol Ther2011
21956618A common 5'-UTR variant in MATE2-K is associated with poor response to metformin.Clin Pharmacol Ther2011
20668102Genetic variants of human organic anion transporter 4 demonstrate altered transport of endogenous substrates.Am J Physiol Renal Physiol2010
20859243Role of organic cation transporter 3 (SLC22A3) and its missense variants in the pharmacologic action of metformin.Pharmacogenet Genomics2010
19098160Identification and characterization of proximal promoter polymorphisms in the human concentrative nucleoside transporter 2 (SLC28A2).J Pharmacol Exp Ther2009
19745787Identification and characterization of novel polymorphisms in the basal promoter of the human transporter, MATE1.Pharmacogenet Genomics2009
19742321Genetic variation in the proximal promoter of ABC and SLC superfamilies: liver and kidney specific expression and promoter activity predict variation.PLoS One2009
19172157Genetic variants in multidrug and toxic compound extrusion-1, hMATE1, alter transport function.Pharmacogenomics J2009
19141711Functional genetic variation in the basal promoter of the organic cation/carnitine transporters OCTN1 (SLC22A4) and OCTN2 (SLC22A5).J Pharmacol Exp Ther2009
18364470The human multidrug resistance protein 4 (MRP4, ABCC4): functional analysis of a highly polymorphic gene.J Pharmacol Exp Ther2008
17700366Functional effects of protein sequence polymorphisms in the organic cation/ergothioneine transporter OCTN1 (SLC22A4).Pharmacogenet Genomics2007
16381950The International Gene Trap Consortium Website: a portal to all publicly available gene trap cell lines in mouse.Nucleic Acids Res2006
16702441Interaction of methotrexate with organic-anion transporting polypeptide 1A2 and its genetic variants.J Pharmacol Exp Ther2006
16982004Comparison of methods for genomic localization of gene trap sequences.BMC Genomics2006
16507879PharmGKB submission update: VI. PMT submissions of genetic variations in neurotransmitter transporters (SLC6, SLC17, and SLC18) to the PharmGKB network.Pharmacol Rev2006
16507878PharmGKB submission update: V. PMT submissions of genetic variation in SLC22 family transporters.Pharmacol Rev2006
16507877PharmGKB submission update: IV. PMT submissions of genetic variations in ATP-Binding cassette transporters to the PharmGKB network.Pharmacol Rev2006
16214850Functional characterization and haplotype analysis of polymorphisms in the human equilibrative nucleoside transporter, ENT2.Drug Metab Dispos2006
16291576The human organic anion transporter 3 (OAT3; SLC22A8): genetic variation and functional genomics.Am J Physiol Renal Physiol2006
15759632Enhancing data sharing in collaborative research projects with DASH.Pac Symp Biocomput2005
15864112Functional analysis of polymorphisms in the organic anion transporter, SLC22A6 (OAT1).Pharmacogenet Genomics2005
15861032Genetic analysis and functional characterization of polymorphisms in the human concentrative nucleoside transporter, CNT2.Pharmacogenet Genomics2005
15738947Functional analysis of genetic variants in the human concentrative nucleoside transporter 3 (CNT3; SLC28A3).Pharmacogenomics J2005
15169925PharmGKB update: III. Genetic variants of SLC22A1, solute carrier family 22 (organic cation transporter), member 1.Pharmacol Rev2004
14978229Functional and genetic diversity in the concentrative nucleoside transporter, CNT1, in human populations.Mol Pharmacol2004
12520002BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.Nucleic Acids Res2003
12893986Sequence diversity and haplotype structure in the human ABCB1 (MDR1, multidrug resistance transporter) gene.Pharmacogenetics2003
12869664PharmGKB update: I. Genetic variants of the organic cation transporter 2 (OCT2, SLC22A2).Pharmacol Rev2003
12603056SNP analysis and presentation in the Pharmacogenetics of Membrane Transporters Project.Pac Symp Biocomput2003
12724623Functional characterization in yeast of genetic variants in the human equilibrative nucleoside transporter, ENT1.Pharmacogenetics2003
12719534Evolutionary conservation predicts function of variants of the human organic cation transporter, OCT1.Proc Natl Acad Sci U S A2003
12719533Natural variation in human membrane transporter genes reveals evolutionary and functional constraints.Proc Natl Acad Sci U S A2003
12142729Polymorphisms in a human kidney xenobiotic transporter, OCT2, exhibit altered function.Pharmacogenetics2002
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Collaborators

Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 36
University of California San Francisco
Co-authored papers 32
Center for Visualization, Washington State University
Co-authored papers 32
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Co-authored papers 25
University of California san francisco
Co-authored papers 16
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Co-authored papers 15
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Co-authored papers 11
University of California-San Francisco
Co-authored papers 9
University of California San Francisco
Co-authored papers 9
University of California San Francisco
Co-authored papers 9
Victor Chang Cardiac Research Institute
Co-authored papers 7
University of California San Francisco (UCSF)
Co-authored papers 7
Cardiovascular Research Institute, University of California San Francisco
Co-authored papers 7
Eshelman School of Pharmacy, University of North Carolina
Co-authored papers 6
University of CaliforniaSan Francisco
Co-authored papers 5
Co-authored papers 5
Children's Hospital Oakland Research Institute
Co-authored papers 4
University of California san francisco
Co-authored papers 4
University of California San Francisco
Co-authored papers 3
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Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 3
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University of California san francisco
Co-authored papers 3
Weill Institute for Neurosciences, University of California-San Francisco
Co-authored papers 3
College of Medicine, Ewha Womans University
Co-authored papers 3
University of California san francisco
Co-authored papers 3
University of California san francisco
Co-authored papers 3
Tsinghua University
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Co-authored papers 3