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Author Details

Kerstin Spirohn
Center for Cancer Systems Biology (CCSB), Dana-Farber Cancer Institute
2010
21
14
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36217029A proteome-scale map of the SARS-CoV-2-human contactome.Nat Biotechnol2023
37853017Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors.Nat Commun2023
37061542Next-generation large-scale binary protein interaction network for Drosophila melanogaster.Nat Commun2023
36949045Assessment of community efforts to advance network-based prediction of protein-protein interactions.Nat Commun2023
37316325N-terminal proteoforms may engage in different protein complexes.Life Sci Alliance2023
37398436AI-guided pipeline for protein-protein interaction drug discovery identifies a SARS-CoV-2 inhibitor.bioRxiv2023
36421765EROS is a selective chaperone regulating the phagocyte NADPH oxidase and purinergic signalling.Elife2022
32296183A reference map of the human binary protein interactome.Nature2020
30886144Network-based prediction of protein interactions.Nat Commun2019
31467278Maximizing binary interactome mapping with a minimal number of assays.Nat Commun2019
26871637Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.Cell2016
27233051Keap1-Independent Regulation of Nrf2 Activity by Protein Acetylation and a BET Bromodomain Protein.PLoS Genet2016
26988032eIF4A inactivates TORC1 in response to amino acid starvation.EMBO J2016
26911346Cdk12 Is A Gene-Selective RNA Polymerase II Kinase That Regulates a Subset of the Transcriptome, Including Nrf2 Target Genes.Sci Rep2016
26438832Discovery of progenitor cell signatures by time-series synexpression analysis during Drosophila embryonic cell immortalization.Proc Natl Acad Sci U S A2015
24896584Functional analysis of the Drosophila embryonic germ cell transcriptome by RNA interference.PLoS One2014
25416956A proteome-scale map of the human interactome network.Cell2014
23749869Landscape of protein-protein interactions in Drosophila immune deficiency signaling during bacterial challenge.Proc Natl Acad Sci U S A2013
21297578Drosophila Ras/MAPK signalling regulates innate immune responses in immune and intestinal stem cells.EMBO J2011
22094269p24 proteins are required for secretion of Wnt ligands.EMBO Rep2011
20579883Wnt/Frizzled signaling requires dPRR, the Drosophila homolog of the prorenin receptor.Curr Biol2010
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Collaborators

Michael Boutros
German Cancer Research Center (DKFZ) and Heidelberg University
Co-authored papers 8
Marc Vidal
Blavatnik Institute, Harvard Medical School
Co-authored papers 6
Frederick P Roth
University of Toronto
Co-authored papers 5
Patrick Aloy
Institucio Catalana de Recerca i Estudis Avancats (ICREA)
Co-authored papers 4
Yu Xia
College of Information Engineering, Zhejiang University of Technology
Co-authored papers 3
Albert-L??szl?? Barab??si
Network Science Institute, Northeastern University
Co-authored papers 3
Javier De Las Rivas
Cancer Research Centre (IBMCC/CSIC/USAL/IBSAL)
Co-authored papers 3
Yanhui Hu
Co-authored papers 2
Gloria M Sheynkman (CM4AI)
University of Virginia
Co-authored papers 2
J??rg Menche
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Jasmin Coulombe-Huntington
Institute for Research in Immunology and Cancer, Universite de Montreal
Co-authored papers 2
Norbert Perrimon
Co-authored papers 2
Song Yi
Livestrong Cancer Institutes, Dell Medical School, The University of Texas at Austin
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Nidhi Sahni
The University of Texas MD Anderson Cancer Center
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Carles Pons
Co-authored papers 2
Iman Haddad
PSL Universite, CNRS
Co-authored papers 1
Charles Boone
University of Toronto
Co-authored papers 1
Elie Maksoud
Buck Institute for Research on Aging
Co-authored papers 1
Yann Verdier
PSL University, CNRS UMR9
Co-authored papers 1
Marc Brehme
Delft University of Technology
Co-authored papers 1
Kenneth H Wan
Lawrence Berkeley National Laboratory
Co-authored papers 1
Matthias Heinig
Co-authored papers 1
Jo??lle Vinh
Universite PSL, LPC CNRS UMR8249
Co-authored papers 1
Xi Liu
Guangdong Pharmaceutical University
Co-authored papers 1
Susan E Celniker
Lawrence Berkeley National Laboratory
Co-authored papers 1
Xianghong Jasmine Zhou
David Geffen School of Medicine, University of California at Los Angeles
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Brenda J Andrews
University of Toronto
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Michael Costanzo
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Jules A Hoffmann
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