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Author Details

Petr Holub
Institute of Computer Science, Masaryk University
2007
52
17
PMIDPaper TitleJournal TitlePublished Year
37454514Interpreting convolutional neural network classifiers applied to laser-induced breakdown optical emission spectra.Talanta2024
36864576The effect of elevated CO2 on photosynthesis is modulated by nitrogen supply and reduced water availability in Picea abies.Tree Physiol2023
37142591Privacy risks of whole-slide image sharing in digital pathology.Nat Commun2023
37167007Growth, physiology, and stomatal parameters of plant polyploids grown under ice age, present-day, and future CO<sub>2</sub> concentrations.New Phytol2023
37295722BIBBOX, a FAIR toolbox and App Store for life science research.N Biotechnol2023
36754147AI for life: Trends in artificial intelligence for biotechnology.N Biotechnol2023
34716754Automated annotations of epithelial cells and stroma in hematoxylin-eosin-stained whole-slide images using cytokeratin re-staining.J Pathol Clin Res2022
35440809Publisher Correction: Field experiments underestimate aboveground biomass response to drought.Nat Ecol Evol2022
35612111The Common Provenance Model: Capturing Distributed Provenance in Life Sciences Processes.Stud Health Technol Inform2022
36206962UV radiation and drought interact differently in grass and forb species of a mountain grassland.Plant Sci2022
35977957Lightweight Distributed Provenance Model for Complex Real-world Environments.Sci Data2022
36188527Interactive effects of UV radiation and water deficit on production characteristics in upland grassland and their estimation by proximity sensing.Ecol Evol2022
35063862Interactive effects of nitrogen, UV and PAR on barley morphology and biochemistry are associated with the leaf C:N balance.Plant Physiol Biochem2022
34182766BBMRI-ERIC Negotiator: Implementing Efficient Access to Biobanks.Biopreserv Biobank2021
35072136GA4GH: International policies and standards for data sharing across genomic research and healthcare.Cell Genom2021
34820659The Data Use Ontology to streamline responsible access to human biomedical datasets.Cell Genom2021
34713101Integration of Biobanks in National eHealth Ecosystems Facilitating Long-Term Longitudinal Clinical-Omics Studies and Citizens' Engagement in Research Through eHealthBioR.Front Digit Health2021
31585490Understanding ecosystems of the future will require more than realistic climate change experiments - A response to Korell et al.Glob Chang Biol2020
32062254Application of organic carbon affects mineral nitrogen uptake by winter wheat and leaching in subsoil: Proximal sensing as a tool for agronomic practice.Sci Total Environ2020
32936006Expanding the BBMRI-ERIC Directory into a Global Catalogue of COVID-19-Ready Collections: A Joint Initiative of BBMRI-ERIC and ISBER.Biopreserv Biobank2020
32527044Ecometabolomics for a Better Understanding of Plant Responses and Acclimation to Abiotic Factors Linked to Global Change.Metabolites2020
32444797BBMRI-ERIC's contributions to research and knowledge exchange on COVID-19.Eur J Hum Genet2020
32302498Extending the Minimum Information About BIobank Data Sharing Terminology to Describe Samples, Sample Donors, and Events.Biopreserv Biobank2020
30535405PhenoMeNal: processing and analysis of metabolomics data in the cloud.Gigascience2019
31938473Distinct seasonal dynamics of responses to elevated CO<sub>2</sub> in two understorey grass species differing in shade-tolerance.Ecol Evol2019
30097290Ultraviolet radiation modulates C:N stoichiometry and biomass allocation in Fagus sylvatica saplings cultivated under elevated CO<sub>2</sub> concentration.Plant Physiol Biochem2019
30143263Induction of phenolic compounds by UV and PAR is modulated by leaf ontogeny and barley genotype.Plant Physiol Biochem2019
30172459Interactive effects of ultraviolet radiation and elevated CO<sub>2</sub> concentration on photosynthetic characteristics of European beech saplings during the vegetation season.Plant Physiol Biochem2019
31475023Distinct Morphological, Physiological, and Biochemical Responses to Light Quality in Barley Leaves and Roots.Front Plant Sci2019
31520075Author Correction: Leveraging European infrastructures to access 1 million human genomes by 2022.Nat Rev Genet2019
31455890Leveraging European infrastructures to access 1 million human genomes by 2022.Nat Rev Genet2019
31509880Pan-European Data Harmonization for Biobanks in ADOPT BBMRI-ERIC.Appl Clin Inform2019
30959296Ozone flux and ozone deposition in a mountain spruce forest are modulated by sky conditions.Sci Total Environ2019
29359962Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health.Biopreserv Biobank2018
28751965Four simple recommendations to encourage best practices in research software.F1000Res2017
28380303Conception and Implementation of an Austrian Biobank Directory Integration Framework.Biopreserv Biobank2017
28370946Asymmetric responses of primary productivity to precipitation extremes: A synthesis of grassland precipitation manipulation experiments.Glob Chang Biol2017
29036577BiobankUniverse: automatic matchmaking between datasets for biobank data discovery and integration.Bioinformatics2017
29302978[Aspiration of functional ovarian cyst].Ceska Gynekol2017
28883174A Decentralized IT Architecture for Locating and Negotiating Access to Biobank Samples.Stud Health Technol Inform2017
26977825Toward Global Biobank Integration by Implementation of the Minimum Information About BIobank Data Sharing (MIABIS 2.0 Core).Biopreserv Biobank2016
27936342BBMRI-ERIC Directory: 515 Biobanks with Over 60 Million Biological Samples.Biopreserv Biobank2016
26860601BBMRI-ERIC: the novel gateway to biobanks. From humans to humans.Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz2016
25583309Ultraviolet and photosynthetically active radiation can both induce photoprotective capacity allowing barley to overcome high radiation stress.Plant Physiol Biochem2015
25576757Morphological, biochemical and physiological traits of upper and lower canopy leaves of European beech tend to converge with increasing altitude.Tree Physiol2015
22402490Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation.Nucleic Acids Res2012
27166441TRAMP Stimulation of Exosome.Enzymes2012
23581021The biobanking research infrastructure BBMRI_CZ: a critical tool to enhance translational cancer research.Klin Onkol2012
22835500The effect of nitrogen addition on biomass production and competition in three expansive tall grasses.Environ Pollut2012
22892239Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1.Genes Dev2012
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Collaborators

University of Groningen, University Medical Center Groningen
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European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
CSC - IT Center for Science Ltd
Co-authored papers 4
Universitat Pompeu Fabra
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European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
University of Cape Town
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University of Zurich
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European Bioinformatics Institute
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Josep Carreras Leukaemia Research Institute (IJC)
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Barcelonabeta Brain Research Center (BBRC), Pasqual Maragall Foundation
Co-authored papers 3
Berlin Institute of Health at Charite - Universitatsmedizin Berlin
Co-authored papers 3
Ontario Institute for Cancer Research
Co-authored papers 3
Spanish National Bioinformatics Institute (INB/ELIXIR-ES)
Co-authored papers 3
Broad Institute
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Pfizer Ltd
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European Bioinformatics Institute
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CSC - IT Center for Science Ltd
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European Bioinformatics Institute
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VU University Amsterdam
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Patient-Centered Outcomes Research Institute
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American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison
Co-authored papers 2
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 2
Universitat Tubingen, Institut fur Arbeitsmedizin
Co-authored papers 2
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Tohoku University Graduate School of Medicine
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University of Cape Town
Co-authored papers 2