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Author Details

Ralf Zimmer
Ludwig-Maximilians-Universitat Munchen
1995
146
43
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36223592Human genetic defects in SRP19 and SRPRA cause severe congenital neutropenia with distinctive proteome changes.Blood2023
36223592Human genetic defects in SRP19 and SRPRA cause severe congenital neutropenia with distinctive proteome changes.Blood2023
37652021Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation.Immunity2023
37652021Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation.Immunity2023
36102188The Amino Acid Homoarginine Inhibits Atherogenesis by Modulating T-Cell Function.Circ Res2022
36102188The Amino Acid Homoarginine Inhibits Atherogenesis by Modulating T-Cell Function.Circ Res2022
36479616Analysis of proteome adaptation reveals a key role of the bacterial envelope in starvation survival.Mol Syst Biol2022
36479616Analysis of proteome adaptation reveals a key role of the bacterial envelope in starvation survival.Mol Syst Biol2022
33217134Vascular neutrophilic inflammation and immunothrombosis distinguish severe COVID-19 from influenza pneumonia.J Thromb Haemost2021
32026945Toward a gold standard for benchmarking gene set enrichment analysis.Brief Bioinform2021
33217134Vascular neutrophilic inflammation and immunothrombosis distinguish severe COVID-19 from influenza pneumonia.J Thromb Haemost2021
34403366Self-sustaining IL-8 loops drive a prothrombotic neutrophil phenotype in severe COVID-19.JCI Insight2021
34383492iBRET Screen of the ABCD1 Peroxisomal Network and Mutation-Induced Network Perturbations.J Proteome Res2021
34383492iBRET Screen of the ABCD1 Peroxisomal Network and Mutation-Induced Network Perturbations.J Proteome Res2021
34403366Self-sustaining IL-8 loops drive a prothrombotic neutrophil phenotype in severe COVID-19.JCI Insight2021
32026945Toward a gold standard for benchmarking gene set enrichment analysis.Brief Bioinform2021
31392308CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes.Bioinformatics2020
32612757SEQU-INTO: Early detection of impurities, contamination and off-targets (ICOs) in long read/MinION sequencing.Comput Struct Biotechnol J2020
31392308CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes.Bioinformatics2020
32612757SEQU-INTO: Early detection of impurities, contamination and off-targets (ICOs) in long read/MinION sequencing.Comput Struct Biotechnol J2020
30759193Comparison of six breast cancer classifiers using qPCR.Bioinformatics2019
31636702A transcriptional response of <i>Clostridium beijerinckii</i> NRRL B-598 to a butanol shock.Biotechnol Biofuels2019
31772845From command-line bioinformatics to bioGUI.PeerJ2019
31875563The Heat Shock Response in Yeast Maintains Protein Homeostasis by Chaperoning and Replenishing Proteins.Cell Rep2019
30821814YESdb: integrative analysis of environmental stress in yeast.Database (Oxford)2019
31235637MS-EmpiRe Utilizes Peptide-level Noise Distributions for Ultra-sensitive Detection of Differentially Expressed Proteins.Mol Cell Proteomics2019
30759193Comparison of six breast cancer classifiers using qPCR.Bioinformatics2019
30793903Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets.J Proteome Res2019
31378854Using Context-Sensitive Text Mining to Identify miRNAs in Different Stages of Atherosclerosis.Thromb Haemost2019
31875563The Heat Shock Response in Yeast Maintains Protein Homeostasis by Chaperoning and Replenishing Proteins.Cell Rep2019
31636702A transcriptional response of <i>Clostridium beijerinckii</i> NRRL B-598 to a butanol shock.Biotechnol Biofuels2019
31772845From command-line bioinformatics to bioGUI.PeerJ2019
31378854Using Context-Sensitive Text Mining to Identify miRNAs in Different Stages of Atherosclerosis.Thromb Haemost2019
31235637MS-EmpiRe Utilizes Peptide-level Noise Distributions for Ultra-sensitive Detection of Differentially Expressed Proteins.Mol Cell Proteomics2019
30793903Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets.J Proteome Res2019
30821814YESdb: integrative analysis of environmental stress in yeast.Database (Oxford)2019
29748186Dicer in Macrophages Prevents Atherosclerosis by Promoting Mitochondrial Oxidative Metabolism.Circulation2018
29980665miR-103 promotes endothelial maladaptation by targeting lncWDR59.Nat Commun2018
30367157Antiviral activity of the mineralocorticoid receptor NR3C2 against Herpes simplex virus Type 1 (HSV-1) infection.Sci Rep2018
30080876Detection of network motifs using three-way ANOVA.PLoS One2018
29529017Improved Ribo-seq enables identification of cryptic translation events.Nat Methods2018
29748186Dicer in Macrophages Prevents Atherosclerosis by Promoting Mitochondrial Oxidative Metabolism.Circulation2018
29362391Widespread modulation of gene expression by copy number variation in skeletal muscle.Sci Rep2018
30080876Detection of network motifs using three-way ANOVA.PLoS One2018
29980665miR-103 promotes endothelial maladaptation by targeting lncWDR59.Nat Commun2018
30367157Antiviral activity of the mineralocorticoid receptor NR3C2 against Herpes simplex virus Type 1 (HSV-1) infection.Sci Rep2018
29529017Improved Ribo-seq enables identification of cryptic translation events.Nat Methods2018
29362391Widespread modulation of gene expression by copy number variation in skeletal muscle.Sci Rep2018
28968461EBF1 binds to EBNA2 and promotes the assembly of EBNA2 chromatin complexes in B cells.PLoS Pathog2017
28968461EBF1 binds to EBNA2 and promotes the assembly of EBNA2 chromatin complexes in B cells.PLoS Pathog2017
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Collaborators

Gergely Csaba
Ludwig-Maximilians-Universitat Munchen
Co-authored papers 26
Caroline C Friedel
Institute of Informatics, Ludwig-Maximilians-Universitat Munchen
Co-authored papers 25
Ludwig Geistlinger
Center for Computational Biomedicine, Harvard Medical School
Co-authored papers 9
J??rgen Haas
University of Edinburgh
Co-authored papers 9
Ulrich H Koszinowski
Max von Pettenkofer-Institute, Ludwig-Maximilians-Universitat Munchen
Co-authored papers 5
Albrecht von Brunn
Max-von-Pettenkofer Institute, Ludwig-Maximilians-University (LMU) Munich
Co-authored papers 4
Susanne M Bailer
Fraunhofer Institute for Interfacial Engineering and Biotechnology IGB
Co-authored papers 3
Heinz-Theodor Mevissen
Co-authored papers 3
Friedhelm Pfeiffer
Co-authored papers 3
Juliane Fluck
Co-authored papers 3
Philip Rosenstiel
Co-authored papers 3
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City University of New York School of Public Health
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Peter Ghazal
UK System Immunity Research Institute, Cardiff University
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Oslo University Hospital
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Armin Baiker
Center for Biomedical Education and Research (ZBAF), Witten/Herdecke University
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Thorsten Stellberger
University Clinic for Swine, University of Veterinary Medicine Vienna
Co-authored papers 2
Manfred Koegl
Boehringer Ingelheim RCV GmbH & Co. KG
Co-authored papers 2
Marcel Ramos
Graduate School of Public Health and Health Policy, City University of New York
Co-authored papers 2
Christoph Klein
Kinderklinik und Kinderpoliklinik der Ludwig-Maximilians-Universitat Munchen
Co-authored papers 1
Oliver F Lange
Center for Integrated Protein Science, Technische Universitat Munchen
Co-authored papers 1
Nitesh Turaga
The University of Melbourne
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Sourav Bandyopadhyay
University of California San Francisco
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Stefan Schreiber
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Fabian Hauck
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Release 1.2