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Author Details

Erik J Soderblom
Center for Genomic and Computational Biology, Duke University
2003
90
29
PMIDPaper TitleJournal TitlePublished Year
37734705Serum proteomic biomarkers diagnostic of knee osteoarthritis.Osteoarthritis Cartilage2024
36727620Glypican-4 regulated actin cytoskeletal reorganization in glucocorticoid treated trabecular meshwork cells and involvement of Wnt/PCP signaling.J Cell Physiol2023
37866785Comprehensive characterization of pathogenic synovial fluid extracellular vesicles from knee osteoarthritis.Clin Immunol2023
37844230Signal transduction at GPCRs: Allosteric activation of the ERK MAPK by β-arrestin.Proc Natl Acad Sci U S A2023
37474847Crosstalk between RNA m<sup>6</sup>A and DNA methylation regulates transposable element chromatin activation and cell fate in human pluripotent stem cells.Nat Genet2023
36696492A "best-in-class" systemic biomarker predictor of clinically relevant knee osteoarthritis structural and pain progression.Sci Adv2023
36865196O-GlcNAcylation regulates neurofilament-light assembly and function and is perturbed by Charcot-Marie-Tooth disease mutations.bioRxiv2023
36542715GABA signaling triggered by TMC-1/Tmc delays neuronal aging by inhibiting the PKC pathway in <i>C. elegans</i>.Sci Adv2022
35448585Protein Kinase A Regulates Autophagy-Associated Proteins Impacting Growth and Virulence of <i>Aspergillus fumigatus</i>.J Fungi (Basel)2022
34369648BioID reveals an ATG9A interaction with ATG13-ATG101 in the degradation of p62/SQSTM1-ubiquitin clusters.EMBO Rep2021
33749590Genetic disruption of WASHC4 drives endo-lysosomal dysfunction and cognitive-movement impairments in mice and humans.Elife2021
34901342Dataset on the mass spectrometry-based proteomic profiling of mouse embryonic fibroblasts from a wild type and DYT-TOR1A mouse model of dystonia, basally and during stress.Data Brief2021
34580165Cnksr2 Loss in Mice Leads to Increased Neural Activity and Behavioral Phenotypes of Epilepsy-Aphasia Syndrome.J Neurosci2021
34504101TNK1 is a ubiquitin-binding and 14-3-3-regulated kinase that can be targeted to block tumor growth.Nat Commun2021
34269176Action potential-coupled Rho GTPase signaling drives presynaptic plasticity.Elife2021
32117764From the Clinic to the Bench and Back Again in One Dog Year: How a Cross-Species Pipeline to Identify New Treatments for Sarcoma Illuminates the Path Forward in Precision Medicine.Front Oncol2020
33323509The Protein Kinase A-Dependent Phosphoproteome of the Human Pathogen Aspergillus fumigatus Reveals Diverse Virulence-Associated Kinase Targets.mBio2020
33177716Chemico-genetic discovery of astrocytic control of inhibition in vivo.Nature2020
30674877In vivo proximity proteomics of nascent synapses reveals a novel regulator of cytoskeleton-mediated synaptic maturation.Nat Commun2019
31652541CDK12 Activity-Dependent Phosphorylation Events in Human Cells.Biomolecules2019
30898588Immediate Release of Gastrin-Releasing Peptide Mediates Delayed Radiation-Induced Pulmonary Fibrosis.Am J Pathol2019
30927289Calcineurin-dependent dephosphorylation of the transcription factor CrzA at specific sites controls conidiation, stress tolerance, and virulence of Aspergillus fumigatus.Mol Microbiol2019
28901143Scanning Quadrupole Data-Independent Acquisition, Part A: Qualitative and Quantitative Characterization.J Proteome Res2018
30207828Layers of regulation of cell-cycle gene expression in the budding yeast Saccharomyces cerevisiae.Mol Biol Cell2018
30459710A Novel Glycoproteomics Workflow Reveals Dynamic O-GlcNAcylation of COPγ1 as a Candidate Regulator of Protein Trafficking.Front Endocrinol (Lausanne)2018
30292408Kin1 kinase localizes at the hyphal septum and is dephosphorylated by calcineurin but is dispensable for septation and virulence in the human pathogen Aspergillus fumigatus.Biochem Biophys Res Commun2018
30518764Macrophage cells secrete factors including LRP1 that orchestrate the rejuvenation of bone repair in mice.Nat Commun2018
29703519Proteomics and immunohistochemistry identify the expression of α-cardiac myosin heavy chain in the jaw-closing muscles of sooty mangabeys (order Primates).Arch Oral Biol2018
29475511The canine MHC class Ia allele DLA-88*508:01 presents diverse self- and canine distemper virus-origin peptides of varying length that have a conserved binding motif.Vet Immunol Immunopathol2018
29530981The proximity-labeling technique BioID identifies sorting nexin 6 as a member of the insulin-like growth factor 1 (IGF1)-IGF1 receptor pathway.J Biol Chem2018
29784830Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.Proc Natl Acad Sci U S A2018
29251506Scanning Quadrupole Data-Independent Acquisition, Part B: Application to the Analysis of the Calcineurin-Interacting Proteins during Treatment of Aspergillus fumigatus with Azole and Echinocandin Antifungal Drugs.J Proteome Res2018
29222113The tail domain of the <i>Aspergillus fumigatus</i> class V myosin MyoE orchestrates septal localization and hyphal growth.J Cell Sci2018
29161034Dynamic Glycosylation Governs the Vertebrate COPII Protein Trafficking Pathway.Biochemistry2018
27973753Vagal nerve stimulation modifies neuronal activity and the proteome of excitatory synapses of amygdala/piriform cortex.J Neurochem2017
28382306Apolipoprotein E mimetic peptide, CN-105, improves outcomes in ischemic stroke.Ann Clin Transl Neurol2017
28238781Caspofungin exposure alters the core septin AspB interactome of Aspergillus fumigatus.Biochem Biophys Res Commun2017
28238698Nasopharyngeal Protein Biomarkers of Acute Respiratory Virus Infection.EBioMedicine2017
28174315A Novel Phosphoregulatory Switch Controls the Activity and Function of the Major Catalytic Subunit of Protein Kinase A in Aspergillus fumigatus.mBio2017
29067690Phosphorylation of Aspergillus fumigatus PkaR impacts growth and cell wall integrity through novel mechanisms.FEBS Lett2017
28588123A Genoproteomic Approach to Detect Peptide Markers of Bacterial Respiratory Pathogens.Clin Chem2017
28663241Glycosylation of KEAP1 links nutrient sensing to redox stress signaling.EMBO J2017
28739857Acylation of Superoxide Dismutase 1 (SOD1) at K122 Governs SOD1-Mediated Inhibition of Mitochondrial Respiration.Mol Cell Biol2017
28045487Probing the Allosteric Role of the α5 Subunit of α3β4α5 Nicotinic Acetylcholine Receptors by Functionally Selective Modulators and Ligands.ACS Chem Biol2017
25596181Pleiotrophin regulates the ductular reaction by controlling the migration of cells in liver progenitor niches.Gut2016
27611567Calcineurin Targets Involved in Stress Survival and Fungal Virulence.PLoS Pathog2016
27609886Identification of an elaborate complex mediating postsynaptic inhibition.Science2016
27446037Dephosphorylation of the Core Septin, AspB, in a Protein Phosphatase 2A-Dependent Manner Impacts Its Localization and Function in the Fungal Pathogen Aspergillus fumigatus.Front Microbiol2016
27187119Proteomic Profiling Reveals Adaptive Responses to Surgical Myocardial Ischemia-Reperfusion in Hibernating Arctic Ground Squirrels Compared to Rats.Anesthesiology2016
26733069Identification of Proteins Bound to Dengue Viral RNA In Vivo Reveals New Host Proteins Important for Virus Replication.mBio2016
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Collaborators

Martin A Moseley
Center for Genomic and Computational Biology
Co-authored papers 48
Yi-Ju Li
Duke University School of Medicine
Co-authored papers 2
Matthew D Hirschey
Duke Molecular Physiology Institute, Duke University School of Medicine
Co-authored papers 2
Gregory A Wray
Duke University
Co-authored papers 1
Andrew J Ghio
Co-authored papers 1
Molly Megraw
Center for Quantitative Life Sciences, Oregon State University
Co-authored papers 1
Christopher B Newgard
Duke Molecular Physiology Institute
Co-authored papers 1
Stoyan Georgiev
Stanford University
Co-authored papers 1
Gaelle Mercenne
University of Utah
Co-authored papers 1
Michael B Major
Washington University in St. Louis
Co-authored papers 1
Kelly L Drew
Institute of Arctic Biology, University of Alaska
Co-authored papers 1
Daniel T Laskowitz
Duke University
Co-authored papers 1
Geoffrey S Ginsburg
National Institutes of Health
Co-authored papers 1
Deborah M Muoio
Co-authored papers 1
David L Corcoran
The University of North Carolina at Chapel Hill
Co-authored papers 1
Qingxia Wei
Princess Margaret Cancer Centre, University Health Network and University of Toronto
Co-authored papers 1
Marilyn J Telen
Co-authored papers 1
Ziqiang Guan
Duke University Medical Center
Co-authored papers 1
Ronald B Turner
University of Virginia School of Medicine
Co-authored papers 1
Thomas O'Hare
Huntsman Cancer Institute, University of Utah
Co-authored papers 1
Julia E Maxson
Knight Cancer Institute, Oregon Health & Science University
Co-authored papers 1
Uwe Ohler
Humboldt University
Co-authored papers 1
Kim Lewis
Co-authored papers 1
Qing Ma
Duke University Medical Center
Co-authored papers 1
Ed S Lein
Allen Institute for Brain Science
Co-authored papers 1
Yarui Diao
Duke University Medical Center
Co-authored papers 1
James R Bain
Duke University Medical Center
Co-authored papers 1
Seok-Ho Yu
Co-authored papers 1
Zhiquan Zhang
Duke University Medical Center
Co-authored papers 1
Michael J Muehlbauer
Duke University School of Medicine
Co-authored papers 1
Release 1.2