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Author Details

Javier A Vel??zquez-Muriel
University of California san francisco
2003
20
17
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
28814505The molecular architecture of the yeast spindle pole body core determined by Bayesian integrative modeling.Mol Biol Cell2017
24203340Modeling of proteins and their assemblies with the Integrative Modeling Platform.Methods Mol Biol2014
22331846Structure-function mapping of a heptameric module in the nuclear pore complex.J Cell Biol2012
23093611A method for integrative structure determination of protein-protein complexes.Bioinformatics2012
23112201Assembly of macromolecular complexes by satisfaction of spatial restraints from electron microscopy images.Proc Natl Acad Sci U S A2012
22272186Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies.PLoS Biol2012
22323229Macromolecular assembly structures by comparative modeling and electron microscopy.Methods Mol Biol2012
20962334Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.J Biol Chem2011
21877292Modeling of proteins and their assemblies with the integrative modeling platform.Methods Mol Biol2011
20507923Integrative structure modeling of macromolecular assemblies from proteomics data.Mol Cell Proteomics2010
19220918Comparison of molecular dynamics and superfamily spaces of protein domain deformation.BMC Struct Biol2009
19223165The structural dynamics of macromolecular processes.Curr Opin Cell Biol2009
20119498Volumetric restrictions in single particle 3DEM reconstruction.Pattern Recognit2008
17437718Quasi-atomic model of bacteriophage t7 procapsid shell: insights into the structure and evolution of a basic fold.Structure2007
17257856Flexible fitting in 3D-EM with incomplete data on superfamily variability.J Struct Biol2007
17442720Infectious bursal disease virus capsid assembly and maturation by structural rearrangements of a transient molecular switch.J Virol2007
16843893Flexible fitting in 3D-EM guided by the structural variability of protein superfamilies.Structure2006
15588824SPI-EM: towards a tool for predicting CATH superfamilies in 3D-EM maps.J Mol Biol2005
15477099XMIPP: a new generation of an open-source image processing package for electron microscopy.J Struct Biol2004
12623169A method for estimating the CTF in electron microscopy based on ARMA models and parameter adjustment.Ultramicroscopy2003
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Collaborators

Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 10
Jose Maria Carazo
National Centre for Biotechnology (CNB CSIC), Campus Universidad Autonoma de Madrid
Co-authored papers 8
Dina Schneidman-Duhovny
The Hebrew University of Jerusalem
Co-authored papers 7
Daniel Russel
University of California san francisco
Co-authored papers 7
Keren Lasker
The Scripps Research Institute
Co-authored papers 7
Benjamin Webb
University of California san francisco
Co-authored papers 6
Jeremy Phillips
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 5
Elina Tjioe
University of California san francisco
Co-authored papers 4
Sjors H W Scheres
Medical Research Council Laboratory of Molecular Biology
Co-authored papers 3
Seung Joong Kim
Korea Advanced Institute of Science and Technology (KAIST)
Co-authored papers 3
Alberto Pascual-Montano
National Center for Biotechnology-CSIC
Co-authored papers 2
Massimiliano Bonomi
Institut Pasteur, Universite Paris Cite, CNRS UMR 8
Co-authored papers 2
Manuel Rueda
The Barcelona Institute of Science and Technology
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Pavel Strop
Pfizer Inc.
Co-authored papers 1
David A Agard
University of California, USA Quantitative Biosciences Institute (QBI) san francisco
Co-authored papers 1
Brian T Chait
The Rockefeller University
Co-authored papers 1
Ho Min Kim
Center for Biomolecular and Cellular Structure, Institute for Basic Science (IBS)
Co-authored papers 1
Neil T Umbreit
University of Washington
Co-authored papers 1
Mark Winey
University of California davis
Co-authored papers 1
Trisha N Davis
University of Washington
Co-authored papers 1
Bret Peterson
Yale University School of Medicine
Co-authored papers 1
Riccardo Pellarin
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Co-authored papers 1
Jos?? Jes??s Fern??ndez
National Center for Biotechnology, Spanish National Research Council
Co-authored papers 1
Keenan C Taylor
Vanderbilt University
Co-authored papers 1
Avner Schlessinger
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai
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Yifan Cheng
Quantitative Bioscience Institute, University of California san francisco
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Release 1.2