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Author Details

Duncan T Odom
Cancer Research UK Cambridge Institute, University of Cambridge
1999
97
53
PMIDPaper TitleJournal TitlePublished Year
37563227Universal DNA methylation age across mammalian tissues.Nat Aging2023
37563227Universal DNA methylation age across mammalian tissues.Nat Aging2023
37561875DNA methylation networks underlying mammalian traits.Science2023
37499658A transcriptional and regulatory map of mouse somite maturation.Dev Cell2023
37561875DNA methylation networks underlying mammalian traits.Science2023
37499658A transcriptional and regulatory map of mouse somite maturation.Dev Cell2023
33602314LINE retrotransposons characterize mammalian tissue-specific and evolutionarily dynamic regulatory regions.Genome Biol2021
33602314LINE retrotransposons characterize mammalian tissue-specific and evolutionarily dynamic regulatory regions.Genome Biol2021
32296040A high-content RNAi screen reveals multiple roles for long noncoding RNAs in cell division.Nat Commun2020
32023452Bookmarking by Non-pioneer Transcription Factors during Liver Development Establishes Competence for Future Gene Activation.Cell Rep2020
31910870Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains.Genome Biol2020
32296040A high-content RNAi screen reveals multiple roles for long noncoding RNAs in cell division.Nat Commun2020
32988407Functional signatures of evolutionarily young CTCF binding sites.BMC Biol2020
32728065Transcriptional activity and strain-specific history of mouse pseudogenes.Nat Commun2020
32023452Bookmarking by Non-pioneer Transcription Factors during Liver Development Establishes Competence for Future Gene Activation.Cell Rep2020
31910870Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains.Genome Biol2020
32988407Functional signatures of evolutionarily young CTCF binding sites.BMC Biol2020
32728065Transcriptional activity and strain-specific history of mouse pseudogenes.Nat Commun2020
30649181Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation.Bioinformatics2019
30649181Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation.Bioinformatics2019
31283095IL-7-dependent compositional changes within the γδ T cell pool in lymph nodes during ageing lead to an unbalanced anti-tumour response.EMBO Rep2019
30944321Proteogenomics and Hi-C reveal transcriptional dysregulation in high hyperdiploid childhood acute lymphoblastic leukemia.Nat Commun2019
30890697Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis.Nat Commun2019
31283095IL-7-dependent compositional changes within the γδ T cell pool in lymph nodes during ageing lead to an unbalanced anti-tumour response.EMBO Rep2019
30890697Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis.Nat Commun2019
30944321Proteogenomics and Hi-C reveal transcriptional dysregulation in high hyperdiploid childhood acute lymphoblastic leukemia.Nat Commun2019
28833286Charting the transcriptional regulatory changes in mouse liver during fasting.Hepatology2018
28833286Charting the transcriptional regulatory changes in mouse liver during fasting.Hepatology2018
30202056Integrative detection and analysis of structural variation in cancer genomes.Nat Genet2018
30341161Chromosome assembly of large and complex genomes using multiple references.Genome Res2018
29958939Mutational landscape of a chemically-induced mouse model of liver cancer.J Hepatol2018
29860520Specificity of RNAi, LNA and CRISPRi as loss-of-function methods in transcriptional analysis.Nucleic Acids Res2018
30086769CTCF maintains regulatory homeostasis of cancer pathways.Genome Biol2018
30275530Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.Nat Genet2018
29180706Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression.Nat Ecol Evol2018
29563166Repeat associated mechanisms of genome evolution and function revealed by the <i>Mus caroli</i> and <i>Mus pahari</i> genomes.Genome Res2018
29452591Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species.Genome Biol2018
29860520Specificity of RNAi, LNA and CRISPRi as loss-of-function methods in transcriptional analysis.Nucleic Acids Res2018
29958939Mutational landscape of a chemically-induced mouse model of liver cancer.J Hepatol2018
30202056Integrative detection and analysis of structural variation in cancer genomes.Nat Genet2018
30086769CTCF maintains regulatory homeostasis of cancer pathways.Genome Biol2018
30341161Chromosome assembly of large and complex genomes using multiple references.Genome Res2018
30275530Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.Nat Genet2018
29563166Repeat associated mechanisms of genome evolution and function revealed by the <i>Mus caroli</i> and <i>Mus pahari</i> genomes.Genome Res2018
29452591Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species.Genome Biol2018
29180706Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression.Nat Ecol Evol2018
29061983Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution.Nat Commun2017
28360329Aging increases cell-to-cell transcriptional variability upon immune stimulation.Science2017
29127279The emergence of piRNAs against transposon invasion to preserve mammalian genome integrity.Nat Commun2017
29061983Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution.Nat Commun2017
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Collaborators

Paul Flicek
European Bioinformatics Institute
Co-authored papers 28
Michael D Wilson
SickKids Research Institute
Co-authored papers 18
John C Marioni
Cancer Research UK Cambridge Institute, University of Cambridge
Co-authored papers 14
Stephen Watt
Wellcome Sanger Institute
Co-authored papers 9
Ernest Fraenkel
Co-authored papers 5
Alvis Brazma
European Bioinformatics Institute
Co-authored papers 5
Thomas M Keane
European Bioinformatics Institute
Co-authored papers 4
Mark Gerstein
Yale University
Co-authored papers 3
P Alexander Rolfe
Co-authored papers 3
David J Adams
Wellcome Sanger Institute
Co-authored papers 3
Qun Pan
University of Toronto
Co-authored papers 3
Benjamin J Blencowe
University of Toronto
Co-authored papers 3
David M Gilbert
Co-authored papers 3
Robert J White
Co-authored papers 3
David Benjamin Gordon
Co-authored papers 3
Benedict Paten
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 3
Simon Tavar??
Irving Institute for Cancer Dynamics, Columbia University
Co-authored papers 3
Ian T Fiddes
Liver Center and Diabetes Center, University of California san francisco
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Chris P Ponting
The University of Edinburgh
Co-authored papers 3
Joseph G Gleeson
University of California
Co-authored papers 2
Emily S W Wong
Co-authored papers 2
Bingbing Yuan
Whitehead Institute for Biomedical Research
Co-authored papers 2
Stephen M J Searle
Wellcome Trust Sanger Institute
Co-authored papers 2
Katherine Belov
Co-authored papers 2
Adam A Margolin
Icahn School of Medicine
Co-authored papers 2
Richard Durbin
University of Cambridge
Co-authored papers 2
Andrew N Hogan
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
Jason Ernst
Co-authored papers 2
Vadim N Gladyshev
Brigham and Women's Hospital
Co-authored papers 2
Evan E Eichler
University of Washington
Co-authored papers 2
Release 1.2