Author details

Full Name

Alison Callahan

Affiliation

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37545984	The Stanford Medicine data science ecosystem for clinical and translational research.	JAMIA Open	2023
37328098	Principled estimation and evaluation of treatment effect heterogeneity: A case study application to dabigatran for patients with atrial fibrillation.	J Biomed Inform	2023
36791900	APLUS: A Python library for usefulness simulations of machine learning models in healthcare.	J Biomed Inform	2023
35235994	Building a Learning Health System: Creating an Analytical Workflow for Evidence Generation to Inform Institutional Clinical Care Guidelines.	Appl Clin Inform	2022
35984654	Assessment of Adherence to Reporting Guidelines by Commonly Used Clinical Prediction Models From a Single Vendor: A Systematic Review.	JAMA Netw Open	2022
33712854	ACE: the Advanced Cohort Engine for searching longitudinal patient records.	J Am Med Inform Assoc	2021
33795682	Ontology-driven weak supervision for clinical entity classification in electronic health records.	Nat Commun	2021
33475682	Association of Systemic Diseases With Surgical Treatment for Obstructive Sleep Apnea Compared With Continuous Positive Airway Pressure.	JAMA Otolaryngology - Head and Neck Surgery	2021
34043432	Treatment and Monitoring Variability in US Metastatic Breast Cancer Care.	JCO Clin Cancer Inform	2021
33720372	Assessment of Extractability and Accuracy of Electronic Health Record Data for Joint Implant Registries.	JAMA Netw Open	2021
32793768	Ontology-driven weak supervision for clinical entity classification in electronic health records.	ArXiv	2020
32375693	Feasibility and evaluation of a large-scale external validation approach for patient-level prediction in an international data network: validation of models predicting stroke in female patients newly diagnosed with atrial fibrillation.	BMC Med Res Methodol	2020
31608767	FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research.	J Neurotrauma	2020
32479175	Research and Reporting Considerations for Observational Studies Using Electronic Health Record Data.	Ann Intern Med	2020
32548636	Measure what matters: Counts of hospitalized patients are a better metric for health system capacity planning for a reopening.	J Am Med Inform Assoc	2020
32695885	Estimating the efficacy of symptom-based screening for COVID-19.	NPJ Digit Med	2020
31304364	It is time to learn from patients like mine.	NPJ Digit Med	2019
31583282	Medical device surveillance with electronic health records.	NPJ Digit Med	2019
31709388	Profiling off-label prescriptions in cancer treatment using social health networks.	JAMIA Open	2019
31162134	Early Detection of Adverse Drug Reactions in Social Health Networks: A Natural Language Processing Pipeline for Signal Detection.	JMIR Public Health Surveill	2019
29557976	U-Index, a dataset and an impact metric for informatics tools and databases.	Sci Data	2018
29862536	Comparing methods for estimation of heterogeneous treatment effects using observational data from health care databases.	Statistics in Medicine	2018
30646309	A Second Opinion From Observational Data on Second-line Diabetes Drugs.	JAMA Netw Open	2018
30646124	Association of Hemoglobin A1c Levels With Use of Sulfonylureas, Dipeptidyl Peptidase 4 Inhibitors, and Thiazolidinediones in Patients With Type 2 Diabetes Treated With Metformin: Analysis From the Observational Health Data Sciences and Informatics Initiative.	JAMA Netw Open	2018
29396125	Performing an Informatics Consult: Methods and Challenges.	J Am Coll Radiol	2018
28576567	Developing a data sharing community for spinal cord injury research.	Exp Neurol	2017
27602295	The health care and life sciences community profile for dataset descriptions.	PeerJ	2016
27055827	RegenBase: a knowledge base of spinal cord injury biology for translational research.	Database (Oxford)	2016
26776181	DISCOVERING PATIENT PHENOTYPES USING GENERALIZED LOW RANK MODELS.	Pac Symp Biocomput	2016
26446143	Feasibility of Prioritizing Drug-Drug-Event Associations Found in Electronic Health Records.	Drug Saf	2016
26293444	Analyzing Information Seeking and Drug-Safety Alert Response by Health Care Professionals as New Methods for Surveillance.	J Med Internet Res	2015
25888240	An evidence-based approach to identify aging-related genes in Caenorhabditis elegans.	BMC Bioinformatics	2015
25592591	Analyzing search behavior of healthcare professionals for drug safety surveillance.	Pac Symp Biocomput	2015
25151493	Text mining for adverse drug events: the promise, challenges, and state of the art.	Drug Saf	2014
25937881	Automatically exposing OpenLifeData via SADI semantic Web Services.	J Biomed Semantics	2014
24602174	The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.	J Biomed Semantics	2014
23735196	Ontology-Based Querying with Bio2RDF's Linked Open Data.	J Biomed Semantics	2013
21624158	HyQue: evaluating hypotheses using Semantic Web technologies.	J Biomed Semantics	2011
19000977	Behaviourally mediated crypsis in two nocturnal moths with contrasting appearance.	Philosophical Transactions of the Royal Society B: Biological Sciences	2009
17360282	Empirical tests of the role of disruptive coloration in reducing detectability.	Proceedings of the Royal Society B: Biological Sciences	2007