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Author Details

Karl K Weitz
Pacific Northwest National Laboratory
2000
74
26
PMIDPaper TitleJournal TitlePublished Year
37117207PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements.Nat Commun2023
37853489Elucidating regulatory processes of intense physical activity by multi-omics analysis.Mil Med Res2023
37722890Myalgic encephalomyelitis/chronic fatigue syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes.Ann Med2023
38076956Long-read RNA-seq atlas of novel microglia isoforms elucidates disease-associated genetic regulation of splicing.medRxiv2023
37193127Metatranscriptomics analysis reveals a novel transcriptional and translational landscape during Middle East respiratory syndrome coronavirus infection.iScience2023
37117207PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements.Nat Commun2023
38076956Long-read RNA-seq atlas of novel microglia isoforms elucidates disease-associated genetic regulation of splicing.medRxiv2023
37853489Elucidating regulatory processes of intense physical activity by multi-omics analysis.Mil Med Res2023
37722890Myalgic encephalomyelitis/chronic fatigue syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes.Ann Med2023
37193127Metatranscriptomics analysis reveals a novel transcriptional and translational landscape during Middle East respiratory syndrome coronavirus infection.iScience2023
34813325Evaluation of Differential Peptide Loading on Tandem Mass Tag-Based Proteomic and Phosphoproteomic Data Quality.J Am Soc Mass Spectrom2022
35896960Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML.Clin Proteomics2022
35872399Regulation of hyperoxia-induced neonatal lung injury via post-translational cysteine redox modifications.Redox Biol2022
36316752Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis.Biotechnol Biofuels Bioprod2022
34813325Evaluation of Differential Peptide Loading on Tandem Mass Tag-Based Proteomic and Phosphoproteomic Data Quality.J Am Soc Mass Spectrom2022
35872399Regulation of hyperoxia-induced neonatal lung injury via post-translational cysteine redox modifications.Redox Biol2022
35896960Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML.Clin Proteomics2022
36316752Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis.Biotechnol Biofuels Bioprod2022
33258588Real-Time Mass Spectrometry Measurements of Respiration Rates in Biological Systems.J Am Soc Mass Spectrom2021
34171263The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance.Cancer Cell2021
34113365New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in <i>Arabidopsis thaliana</i>.Front Plant Sci2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
33622792Intracellular pathways for lignin catabolism in white-rot fungi.Proc Natl Acad Sci U S A2021
33258588Real-Time Mass Spectrometry Measurements of Respiration Rates in Biological Systems.J Am Soc Mass Spectrom2021
34809453A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.mBio2021
33622792Intracellular pathways for lignin catabolism in white-rot fungi.Proc Natl Acad Sci U S A2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
34809453A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.mBio2021
34171263The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance.Cancer Cell2021
34113365New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in <i>Arabidopsis thaliana</i>.Front Plant Sci2021
32133427Evaluation of the cytotoxic and cellular proteome impacts of food-grade TiO<sub>2</sub> (E171) using simulated gastrointestinal digestions and a tri-culture small intestinal epithelial model.NanoImpact2020
32133426A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages.NanoImpact2020
32133427Evaluation of the cytotoxic and cellular proteome impacts of food-grade TiO<sub>2</sub> (E171) using simulated gastrointestinal digestions and a tri-culture small intestinal epithelial model.NanoImpact2020
32407631Block Design with Common Reference Samples Enables Robust Large-Scale Label-Free Quantitative Proteome Profiling.J Proteome Res2020
32170068Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery.NPJ Biofilms Microbiomes2020
31669189Linking internal dosimetries of the propyl metabolic series in rats and humans using physiologically based pharmacokinetic (PBPK) modeling.Regul Toxicol Pharmacol2020
32750668Stochiometric quantification of the thiol redox proteome of macrophages reveals subcellular compartmentalization and susceptibility to oxidative perturbations.Redox Biol2020
32966491Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools.Mol Omics2020
32498228Remodeling of the <i>Histoplasma Capsulatum</i> Membrane Induced by Monoclonal Antibodies.Vaccines (Basel)2020
31669189Linking internal dosimetries of the propyl metabolic series in rats and humans using physiologically based pharmacokinetic (PBPK) modeling.Regul Toxicol Pharmacol2020
32966491Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools.Mol Omics2020
32750668Stochiometric quantification of the thiol redox proteome of macrophages reveals subcellular compartmentalization and susceptibility to oxidative perturbations.Redox Biol2020
32498228Remodeling of the <i>Histoplasma Capsulatum</i> Membrane Induced by Monoclonal Antibodies.Vaccines (Basel)2020
32407631Block Design with Common Reference Samples Enables Robust Large-Scale Label-Free Quantitative Proteome Profiling.J Proteome Res2020
32170068Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery.NPJ Biofilms Microbiomes2020
32133426A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages.NanoImpact2020
31450886SLIM Ultrahigh Resolution Ion Mobility Spectrometry Separations of Isotopologues and Isotopomers Reveal Mobility Shifts due to Mass Distribution Changes.Anal Chem2019
31450886SLIM Ultrahigh Resolution Ion Mobility Spectrometry Separations of Isotopologues and Isotopomers Reveal Mobility Shifts due to Mass Distribution Changes.Anal Chem2019
31550007Physiologically Based Pharmacokinetic Modeling of Salivary Concentrations for Noninvasive Biomonitoring of 2,4-Dichlorophenoxyacetic Acid (2,4-D).Toxicol Sci2019
31550007Physiologically Based Pharmacokinetic Modeling of Salivary Concentrations for Noninvasive Biomonitoring of 2,4-Dichlorophenoxyacetic Acid (2,4-D).Toxicol Sci2019
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Collaborators

Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 25
Matthew E Monroe
Pacific Northwest National Laboratory
Co-authored papers 15
Wei-Jun Qian
Co-authored papers 11
Vladislav A Petyuk
Pacific Northwest National Laboratory
Co-authored papers 10
Thomas O Metz
Pacific Northwest National Laboratory
Co-authored papers 10
Jennifer E Kyle
Pacific Northwest National Laboratory
Co-authored papers 9
Young-Mo Kim
Hanyang University
Co-authored papers 9
Ronald J Moore
Co-authored papers 9
Kristin E Burnum-Johnson
Pacific Northwest National Laboratory
Co-authored papers 9
Kelly G Stratton
Pacific Northwest National Laboratory
Co-authored papers 7
Marina A Gritsenko
Pacific Northwest National Laboratory
Co-authored papers 7
Athena A Schepmoes
Pacific Northwest National Laboratory
Co-authored papers 7
Tao Liu
Pacific Northwest National Laboratory
Co-authored papers 7
Bobbie-Jo M Webb-Robertson
Pacific Northwest National Laboratory
Co-authored papers 6
Paul D Piehowski
Pacific Northwest National Laboratory
Co-authored papers 6
Ernesto S Nakayasu
Co-authored papers 6
Erika M Zink
Pacific Northwest National Laboratory
Co-authored papers 6
David G Camp
Co-authored papers 6
Karin D Rodland
Oregon Health and Science University
Co-authored papers 5
Katrina M Waters
Pacific Northwest National Laboratory
Co-authored papers 5
Ljiljana Pa??a-Toli??
Pacific Northwest National Laboratory
Co-authored papers 5
Joshua N Adkins
Co-authored papers 5
Kent J Bloodsworth
Co-authored papers 5
Erin S Baker
North Carolina State University
Co-authored papers 5
Lisa M Bramer
Co-authored papers 4
Anil K Shukla
Pacific Northwest National Laboratory
Co-authored papers 4
Yoshihiro Kawaoka
Influenza Research Institute, University of Wisconsin
Co-authored papers 4
Jamie Moon
Saint John's Cancer Institute (SJCI)
Co-authored papers 4
Samuel O Purvine
Pacific Northwest National Laboratory
Co-authored papers 4
Amie J Eisfeld
Influenza Research Institute, University of Wisconsin-Madison
Co-authored papers 4
Release 1.2