| 37186213 | A second unveiling: Haplotig masking of the eastern oyster genome improves population-level inference. | Mol Ecol Resour | 2024 |
| 37147111 | High resolution genomes of multiple <i>Xiphophorus</i> species provide new insights into microevolution, hybrid incompatibility, and epistasis. | Genome Res | 2023 |
| 37919451 | Single-haplotype comparative genomics provides insights into lineage-specific structural variation during cat evolution. | Nat Genet | 2023 |
| 35962045 | Author Correction: Comparative and demographic analysis of orang-utan genomes. | Nature | 2022 |
| 33953399 | A high-quality bonobo genome refines the analysis of hominid evolution. | Nature | 2021 |
| 33664263 | A chromosome-level genome of Astyanax mexicanus surface fish for comparing population-specific genetic differences contributing to trait evolution. | Nat Commun | 2021 |
| 33090996 | A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism. | PLoS Genet | 2020 |
| 32050986 | The quail genome: insights into social behaviour, seasonal biology and infectious disease response. | BMC Biol | 2020 |
| 33335035 | Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility. | Science | 2020 |
| 33214712 | Author Correction: Elephant shark genome provides unique insights into gnathostome evolution. | Nature | 2020 |
| 31123079 | The <i>C. elegans</i> embryonic transcriptome with tissue, time, and alternative splicing resolution. | Genome Res | 2019 |
| 31208332 | Isolated C. elegans germ nuclei exhibit distinct genomic profiles of histone modification and gene expression. | BMC Genomics | 2019 |
| 29284660 | The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of <i>Drosophila</i> and <i>Caenorhabditis elegans</i> Transcription Factors. | Genetics | 2018 |
| 29434351 | Clonal polymorphism and high heterozygosity in the celibate genome of the Amazon molly. | Nat Ecol Evol | 2018 |
| 27852011 | A New Chicken Genome Assembly Provides Insight into Avian Genome Structure. | G3 (Bethesda) | 2017 |
| 29092041 | A 3-way hybrid approach to generate a new high-quality chimpanzee reference genome (Pan_tro_3.0). | Gigascience | 2017 |
| 28508897 | Whole genome analysis of a schistosomiasis-transmitting freshwater snail. | Nat Commun | 2017 |
| 28832025 | Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail. | Nat Commun | 2017 |
| 27034376 | Long-read sequence assembly of the gorilla genome. | Science | 2016 |
| 27172201 | A High-Resolution SNP Array-Based Linkage Map Anchors a New Domestic Cat Draft Genome Assembly and Provides Detailed Patterns of Recombination. | G3 (Bethesda) | 2016 |
| 27531719 | The time-resolved transcriptome of C. elegans. | Genome Res | 2016 |
| 25995208 | Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856. | Genetics | 2015 |
| 26377836 | The genome of the vervet (Chlorocebus aethiops sabaeus). | Genome Res | 2015 |
| 26108489 | Physical Mapping and Refinement of the Painted Turtle Genome (Chrysemys picta) Inform Amniote Genome Evolution and Challenge Turtle-Bird Chromosomal Conservation. | Genome Biol Evol | 2015 |
| 24402279 | Elephant shark genome provides unique insights into gnathostome evolution. | Nature | 2014 |
| 25209798 | Gibbon genome and the fast karyotype evolution of small apes. | Nature | 2014 |
| 25372608 | Isolation of specific neurons from C. elegans larvae for gene expression profiling. | PLoS One | 2014 |
| 25385592 | Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication. | Proc Natl Acad Sci U S A | 2014 |
| 25164757 | Comparative analysis of regulatory information and circuits across distant species. | Nature | 2014 |
| 25164755 | Comparative analysis of the transcriptome across distant species. | Nature | 2014 |
| 23537068 | The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage. | Genome Biol | 2013 |
| 23825009 | Evolution and diversity of copy number variation in the great ape lineage. | Genome Res | 2013 |
| 23800452 | The million mutation project: a new approach to genetics in Caenorhabditis elegans. | Genome Res | 2013 |
| 23550086 | The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures. | Genome Res | 2013 |
| 23542700 | The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits. | Nat Genet | 2013 |
| 22398555 | Insights into hominid evolution from the gorilla genome sequence. | Nature | 2012 |
| 21177958 | A global analysis of C. elegans trans-splicing. | Genome Res | 2011 |
| 22019781 | Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster. | Nat Genet | 2011 |
| 21627800 | The development and characterization of a 60K SNP chip for chicken. | BMC Genomics | 2011 |
| 21602919 | A comprehensive analysis of gene expression changes provoked by bacterial and fungal infection in C. elegans. | PLoS One | 2011 |
| 21453517 | A vertebrate case study of the quality of assemblies derived from next-generation sequences. | Genome Biol | 2011 |
| 21270892 | Comparative and demographic analysis of orang-utan genomes. | Nature | 2011 |
| 21177971 | Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data. | Genome Res | 2011 |
| 20305016 | Genome assembly quality: assessment and improvement using the neutral indel model. | Genome Res | 2010 |
| 21177976 | Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. | Science | 2010 |
| 20565764 | Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays. | BMC Genomics | 2010 |
| 20174564 | Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response. | PLoS Genet | 2010 |
| 20360741 | The genome of a songbird. | Nature | 2010 |
| 19212409 | A burst of segmental duplications in the genome of the African great ape ancestor. | Nature | 2009 |
| 19435531 | Back to Bermuda: how is science best served? | Genome Biol | 2009 |