Author details

Full Name

Ilene Karsch-Mizrachi

Affiliation

ORCID

Career Start Year

1989

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37889039	GenBank 2024 Update.	Nucleic Acids Res	2024
37430074	Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification.	Nat Biotechnol	2023
36350640	GenBank 2023 update.	Nucleic Acids Res	2023
37608068	Author Correction: Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification.	Nat Biotechnol	2023
38085797	Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications.		2023
35197464	Multilateral benefit-sharing from digital sequence information will support both science and biodiversity conservation.	Nat Commun	2022
35037198	Using GenBank and SRA.	Methods in Molecular Biology	2022
34850943	GenBank.	Nucleic Acids Res	2022
35230423	Rapid automated validation, annotation and publication of SARS-CoV-2 sequences to GenBank.	Database : the journal of biological databases and curation	2022
35169842	Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.	Gigascience	2022
34384346	Ribovore: ribosomal RNA sequence analysis for GenBank submissions and database curation.	BMC Bioinformatics	2021
33196830	GenBank.	Nucleic Acids Res	2021
33166387	The international nucleotide sequence database collaboration.	Nucleic Acids Res	2021
32561801	COVID-19 pandemic reveals the peril of ignoring metadata standards.	Sci Data	2020
32761142	NCBI Taxonomy: a comprehensive update on curation, resources and tools.	Database : the journal of biological databases and curation	2020
31032836	The NCBI BioCollections Database.	Database : the journal of biological databases and curation	2019
30556814	Minimum Information about an Uncultivated Virus Genome (MIUViG).	Nat Biotechnol	2019
30365038	GenBank.	Nucleic Acids Res	2019
29190397	The international nucleotide sequence database collaboration.	Nucleic Acids Res	2018
29979671	Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.	Nat Biotechnol	2018
29140468	GenBank.	Nucleic Acids Res	2018
29688360	The NCBI BioCollections Database.	Database : the journal of biological databases and curation	2018
29069347	VecScreen_plus_taxonomy: imposing a tax(onomy) increase on vector contamination screening.	Bioinformatics	2018
29406516	Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.	Nat Biotechnol	2018
27896718	Managing Sequence Data.	Methods in Molecular Biology	2017
28787424	Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.	Nat Biotechnol	2017
27899564	GenBank.	Nucleic Acids Research	2017
26590407	GenBank.	Nucleic Acids Research	2016
28369359	Plant specimen contextual data consensus.	Gigascience	2016
26657633	The International Nucleotide Sequence Database Collaboration.	Nucleic Acids Res	2016
26519398	Using GenBank.	Methods in Molecular Biology	2016
25414350	GenBank.	Nucleic Acids Research	2015
24936976	Standardized metadata for human pathogen/vector genomic sequences.	PLoS One	2014
24217914	GenBank.	Nucleic Acids Research	2014
25197497	Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records.	Stand Genomic Sci	2014
25197446	Genomic standards consortium projects.	Stand Genomic Sci	2014
23180798	The International Nucleotide Sequence Database Collaboration.	Nucleic Acids Res	2013
23193287	GenBank.	Nucleic Acids Research	2013
22080546	The International Nucleotide Sequence Database Collaboration.	Nucleic Acids Res	2012
22768370	Report of the 13(th) Genomic Standards Consortium Meeting, Shenzhen, China, March 4-7, 2012.	Stand Genomic Sci	2012
23110974	Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference.	Database (Oxford)	2012
22144687	GenBank.	Nucleic Acids Research	2012
22140104	Database resources of the National Center for Biotechnology Information.	Nucleic Acids Res	2012
22139929	BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.	Nucleic Acids Res	2012
21552244	Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.	Nat Biotechnol	2011
21205783	Towards BioDBcore: a community-defined information specification for biological databases.	Database (Oxford)	2011
21472015	The genomic standards consortium: bringing standards to life for microbial ecology.	ISME J	2011
21071399	GenBank.	Nucleic Acids Research	2011
21106499	The International Nucleotide Sequence Database Collaboration.	Nucleic Acids Res	2011
21097890	Database resources of the National Center for Biotechnology Information.	Nucleic Acids Res	2011