Author details

Full Name

Shuba Gopal

Affiliation

Broad Institute of Harvard and MIT

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
31068703	The landscape of cancer cell line metabolism.	Nat Med	2019
31554815	Metabolomic adaptations and correlates of survival to immune checkpoint blockade.	Nat Commun	2019
29459470	Metabolic Predictors of Incident Coronary Heart Disease in Women.	Circulation	2018
24440720	ZFHX4 interacts with the NuRD core member CHD4 and regulates the glioblastoma tumor-initiating cell state.	Cell Rep	2014
23269662	ATARiS: computational quantification of gene suppression phenotypes from multisample RNAi screens.	Genome Res	2013
21746896	Systematic investigation of genetic vulnerabilities across cancer cell lines reveals lineage-specific dependencies in ovarian cancer.	Proc Natl Acad Sci U S A	2011
21548937	A comprehensive platform for highly multiplexed mammalian functional genetic screens.	BMC Genomics	2011
20829823	Towards patient-based cancer therapeutics.	Nat Biotechnol	2010
16542417	Genetic algorithm learning as a robust approach to RNA editing site prediction.	BMC Bioinformatics	2006
16956416	Correction: genetic algorithm learning as a robust approach to RNA editing site site prediction.	BMC Bioinformatics	2006
16277750	A computational investigation of kinetoplastid trans-splicing.	Genome Biol	2005
14530436	An organism-specific method to rank predicted coding regions in Trypanosoma brucei.	Nucleic Acids Res	2003
11574054	A functional update of the Escherichia coli K-12 genome.	Genome Biol	2001
11242120	Homology-based annotation yields 1,042 new candidate genes in the Drosophila melanogaster genome.	Nat Genet	2001

1 - 14 of 14

Nuno A Fonseca

European Bioinformatics Institute

Career Start Year 2008

Number of shared co-authors 3

Nozomu Yachie

The University of British Columbia

Career Start Year 2006

Number of shared co-authors 0

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 0

Mario Stanke

Institut fur Mathematik und Informatik, Universitat Greifswald

Career Start Year 2003

Number of shared co-authors 0

Zhaolei Zhang

University of Toronto

Career Start Year 2002

Number of shared co-authors 0

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 0

Tyler Alioto

Universitat de Barcelona (UB)

Career Start Year 2001

Number of shared co-authors 2

Vladimir B Bajic

King Abdullah University of Science and Technology (KAUST)

Career Start Year 2000

Number of shared co-authors 1

Gunnar R??tsch

ETH Zurich

Career Start Year 1999

Number of shared co-authors 2

Frederick P Roth

University of Toronto

Career Start Year 1998

Number of shared co-authors 7

Vineet Bafna

University of California San Diego

Career Start Year 1998

Number of shared co-authors 3

Ian Korf

University of California davis

Career Start Year 1998

Number of shared co-authors 3

David R Powell

Biomedicine Discovery Institute, Monash University

Career Start Year 1998

Number of shared co-authors 0

Iddo Friedberg

Iowa State University

Career Start Year 1997

Number of shared co-authors 0

Asa Ben-Hur

Colorado State University

Career Start Year 1996

Number of shared co-authors 0

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 11

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 0

Steven E Brenner

University of California berkeley

Career Start Year 1994

Number of shared co-authors 4

Mark Yandell

University of Utah

Career Start Year 1994

Number of shared co-authors 3

Simon Kasif

Boston University

Career Start Year 1993

Number of shared co-authors 2

Ewan Birney

European Bioinformatics Institute

Career Start Year 1992

Number of shared co-authors 5

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 1

Steven L Salzberg

Center for Computational Biology, Johns Hopkins University

Career Start Year 1992

Number of shared co-authors 1

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 7

Roderic Guig??

Barcelona Institute of Science and Technology

Career Start Year 1990

Number of shared co-authors 4

Peer Bork

University of Wurzburg

Career Start Year 1989

Number of shared co-authors 2

David Haussler

Genomics Institute, University of California Santa Cruz

Career Start Year 1986

Number of shared co-authors 14

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 6

Brian J Haas

Broad Institute of MIT and Harvard

Career Start Year 1981

Number of shared co-authors 11

Richard Durbin

University of Cambridge

Career Start Year 1964

Number of shared co-authors 3

row(s) 1 - 30 of 30

David E Root

Broad Institute of Harvard and MIT

Co-authored papers 6

William C Hahn

Broad Institute of MIT and Harvard, USA Dana-Farber Cancer Institute

Co-authored papers 5

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Co-authored papers 4

Levi A Garraway

Broad Institute of Harvard and MIT

Co-authored papers 4

Stuart L Schreiber

Broad Institute

Co-authored papers 3

Aviad Tsherniak

Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard

Co-authored papers 3

Barbara A Weir

Janssen Research and Development LLC

Co-authored papers 3

Clary B Clish

Broad Institute of MIT and Harvard

Co-authored papers 3

Jill P Mesirov

University of California San Diego

Co-authored papers 2

Glenn S Cowley

Broad Institute of Harvard and MIT

Co-authored papers 2

Andrea Califano

Columbia University

Co-authored papers 2

William R Sellers

Co-authored papers 2

Jesse S Boehm

Broad Institute of Harvard and MIT

Co-authored papers 2

Nicolas Stransky

Co-authored papers 2

Jordi Barretina

Co-authored papers 2

Pablo Tamayo

University of California San Diego

Co-authored papers 2

Matthew Meyerson

Broad Institute

Co-authored papers 1

Mark-Anthony Bray

Co-authored papers 1

Adam A Margolin

Icahn School of Medicine

Co-authored papers 1

Jeongwu Lee

Lerner Research Institute, Cleveland Clinic

Co-authored papers 1

Craig H Mermel

Co-authored papers 1

Stefan Bekiranov

University of Virginia

Co-authored papers 1

Kevin R Brown

College Street, University of Toronto

Co-authored papers 1

Joshua Gould

Co-authored papers 1

Toni K Choueiri

Dana-Farber Cancer Institute

Co-authored papers 1

Antonio Iavarone

Sylvester Comprehensive Cancer Center, Miller School of Medicine, University of Miami

Co-authored papers 1

Ronny Drapkin

University of Pennsylvania School of Medicine

Co-authored papers 1

Roel G W Verhaak

Yale School of Medicine

Co-authored papers 1

Mark Schroeder

University of Missouri

Co-authored papers 1

Lawrence E Heisler

Ontario Institute for Cancer Research

Co-authored papers 1

1 - 30

Author Details

Column Actions

Recommended Authors

Collaborators