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Author Details

Alan G Hinnebusch
Eunice Kennedy Shriver National Institute of Child Health and Human Development
1977
282
94
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37986768Transcriptome-wide analysis of the function of Ded1 in translation preinitiation complex assembly in a reconstituted in vitro system.bioRxiv2024
36864781Differential requirements for Gcn5 and NuA4 HAT activities in the starvation-induced versus basal transcriptomes.Nucleic Acids Res2023
37986989Yeast eIF2A has a minimal role in translation initiation and uORF-mediated translational control <i>in vivo</i>.bioRxiv2023
37043534Differential requirements for P stalk components in activating yeast protein kinase Gcn2 by stalled ribosomes during stress.Proc Natl Acad Sci U S A2023
37439347mRNA decapping activators Pat1 and Dhh1 regulate transcript abundance and translation to tune cellular responses to nutrient availability.Nucleic Acids Res2023
37433636Translational regulation by uORFs and start codon selection stringency.Genes Dev2023
37266577Decapping factor Dcp2 controls mRNA abundance and translation to adjust metabolism and filamentation to nutrient availability.Elife2023
36711592Decapping factor Dcp2 controls mRNA abundance and translation to adjust metabolism and filamentation to nutrient availability.bioRxiv2023
34791232uS5/Rps2 residues at the 40S ribosome entry channel enhance initiation at suboptimal start codons in vivo.Genetics2022
35793348Distinct functions of three chromatin remodelers in activator binding and preinitiation complex assembly.PLoS Genet2022
33290553Correction: Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.Nucleic Acids Res2021
33764298Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs.Elife2021
34946015Down-Regulation of Yeast Helicase Ded1 by Glucose Starvation or Heat-Shock Differentially Impairs Translation of Ded1-Dependent mRNAs.Microorganisms2021
34648019Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.Nucleic Acids Res2021
32469309Distinct interactions of eIF4A and eIF4E with RNA helicase Ded1 stimulate translation in vivo.Elife2020
31915290eIF1 discriminates against suboptimal initiation sites to prevent excessive uORF translation genome-wide.RNA2020
32663283Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.Nucleic Acids Res2020
32589964Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes.Mol Cell2020
32955564eIF2α interactions with mRNA control accurate start codon selection by the translation preinitiation complex.Nucleic Acids Res2020
30576497A network of eIF2β interactions with eIF1 and Met-tRNAi promotes accurate start codon selection by the translation preinitiation complex.Nucleic Acids Res2019
31810458Temperature-dependent regulation of upstream open reading frame translation in S. cerevisiae.BMC Biol2019
31299079Functional interplay between DEAD-box RNA helicases Ded1 and Dbp1 in preinitiation complex attachment and scanning on structured mRNAs in vivo.Nucleic Acids Res2019
31335872Correction: Conserved mRNA-granule component Scd6 targets Dhh1 to repress translation initiation and activates Dcp2-mediated mRNA decay in vivo.PLoS Genet2019
29281028Please do not recycle! Translation reinitiation in microbes and higher eukaryotes.FEMS Microbiol Rev2018
30146315Tma64/eIF2D, Tma20/MCT-1, and Tma22/DENR Recycle Post-termination 40S Subunits In Vivo.Mol Cell2018
30475211Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.Elife2018
30281017Yeast Ded1 promotes 48S translation pre-initiation complex assembly in an mRNA-specific and eIF4F-dependent manner.Elife2018
30532217Conserved mRNA-granule component Scd6 targets Dhh1 to repress translation initiation and activates Dcp2-mediated mRNA decay in vivo.PLoS Genet2018
29666249eIF1 Loop 2 interactions with Met-tRNA<sub>i</sub> control the accuracy of start codon selection by the scanning preinitiation complex.Proc Natl Acad Sci U S A2018
29628310Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 5' Promoters in Yeast.Mol Cell2018
29785963SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast.Genes Dev2018
29192585Yeast eIF4A enhances recruitment of mRNAs regardless of their structural complexity.Elife2017
28169832Interface between 40S exit channel protein uS7/Rps5 and eIF2α modulates start codon recognition in vivo.Elife2017
28223523Rps3/uS3 promotes mRNA binding at the 40S ribosome entry channel and stabilizes preinitiation complexes at start codons.Proc Natl Acad Sci U S A2017
28297669Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.Cell Rep2017
28442192Structural Insights into the Mechanism of Scanning and Start Codon Recognition in Eukaryotic Translation Initiation.Trends Biochem Sci2017
29206102eIF1A residues implicated in cancer stabilize translation preinitiation complexes and favor suboptimal initiation sites in yeast.Elife2017
27313038Translational control by 5'-untranslated regions of eukaryotic mRNAs.Science2016
26602697Genome-wide cooperation by HAT Gcn5, remodeler SWI/SNF, and chaperone Ydj1 in promoter nucleosome eviction and transcriptional activation.Genome Res2016
27782884Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex.Elife2016
27601676eIF4B stimulates translation of long mRNAs with structured 5' UTRs and low closed-loop potential but weak dependence on eIF4G.Proc Natl Acad Sci U S A2016
25780171Translational control 1995-2015: unveiling molecular underpinnings and roles in human biology.RNA2015
26276635Rli1/ABCE1 Recycles Terminating Ribosomes and Controls Translation Reinitiation in 3'UTRs In Vivo.Cell2015
26134896The β-hairpin of 40S exit channel protein Rps5/uS7 promotes efficient and accurate translation initiation in vivo.Elife2015
26212456Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.Mol Cell2015
26122911Genome-wide analysis of translational efficiency reveals distinct but overlapping functions of yeast DEAD-box RNA helicases Ded1 and eIF4A.Genome Res2015
26023119Cell biology. Blocking stress response for better memory?Science2015
25990728Eukaryotic translation initiation factor eIF5 promotes the accuracy of start codon recognition by regulating Pi release and conformational transitions of the preinitiation complex.Nucleic Acids Res2015
25695491Interaction between the tRNA-binding and C-terminal domains of Yeast Gcn2 regulates kinase activity in vivo.PLoS Genet2015
25670678Conformational changes in the P site and mRNA entry channel evoked by AUG recognition in yeast translation preinitiation complexes.Nucleic Acids Res2015
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Collaborators

Eunice Kennedy Shriver National Institute of Child Health and Human Development
Co-authored papers 8
Co-authored papers 4
Dana Farber Cancer Institute
Co-authored papers 4
University of Washington
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
The State University of New Jersey
Co-authored papers 2
University of Oxford
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Center for Gene Regulation in Health and Disease, Cleveland State University
Co-authored papers 1
Northwestern University
Co-authored papers 1
Co-authored papers 1
Cambridge Institute for Medical Research, University of Cambridge
Co-authored papers 1
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Co-authored papers 1
University of British Columbia
Co-authored papers 1
University of Konstanz Universitatsstrasse 10
Co-authored papers 1
Massachusetts Institute of Technology
Co-authored papers 1
Chalmers University of Technology
Co-authored papers 1
Institute of Human Genetics, University Hospital Essen, University Duisburg-Essen
Co-authored papers 1
California Institute of Technology
Co-authored papers 1
Panum Institute, University of Copenhagen
Co-authored papers 1
Institute of Advanced Energy, Kyoto University
Co-authored papers 1
Massachusetts Institute of Technology
Co-authored papers 1
Universidad de Sevilla
Co-authored papers 1
National Cancer Institute
Co-authored papers 1
the Rockefeller University
Co-authored papers 1
Princess Maxima Center for Pediatric Oncology
Co-authored papers 1
University of Virginia School of Medicine
Co-authored papers 1
University of Colorado School of Medicine
Co-authored papers 1