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Author Details
Full Name
Alexander Gusev
Affiliation
The Center for Functional Cancer Epigenetics, Dana Farber Cancer Institute
ORCID
Career Start Year
2006
Papers
75
H Index
36
Expertise
CM4AI Collaborator
PMID
Paper Title
Journal Title
Published Year
36939312
The lingering effects of Neanderthal introgression on human complex traits.
Elife
2023
37612286
A biallelic multiple nucleotide length polymorphism explains functional causality at 5p15.33 prostate cancer risk locus.
Nat Commun
2023
36945630
Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.
medRxiv
2023
36939312
The lingering effects of Neanderthal introgression on human complex traits.
Elife
2023
36546757
Optimized high-throughput screening of non-coding variants identified from genome-wide association studies.
Nucleic Acids Res
2023
37490908
Genotype error due to low-coverage sequencing induces uncertainty in polygenic scoring.
Am J Hum Genet
2023
37490908
Genotype error due to low-coverage sequencing induces uncertainty in polygenic scoring.
Am J Hum Genet
2023
37612286
A biallelic multiple nucleotide length polymorphism explains functional causality at 5p15.33 prostate cancer risk locus.
Nat Commun
2023
36945630
Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.
medRxiv
2023
36546757
Optimized high-throughput screening of non-coding variants identified from genome-wide association studies.
Nucleic Acids Res
2023
35144655
Somatic mutational profiles and germline polygenic risk scores in human cancer.
Genome Med
2022
35512711
Germline predisposition to pediatric Ewing sarcoma is characterized by inherited pathogenic variants in DNA damage repair genes.
Am J Hum Genet
2022
36171194
Multi-context genetic modeling of transcriptional regulation resolves novel disease loci.
Nat Commun
2022
35697866
Allelic imbalance of chromatin accessibility in cancer identifies candidate causal risk variants and their mechanisms.
Nat Genet
2022
35804456
DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk.
Genome Biol
2022
35931050
Multi-ancestry fine-mapping improves precision to identify causal genes in transcriptome-wide association studies.
Am J Hum Genet
2022
36263809
The regulatory landscape of multiple brain regions in outbred heterogeneous stock rats.
Nucleic Acids Res
2022
35042540
Functional characterisation of the amyotrophic lateral sclerosis risk locus GPX3/TNIP1.
Genome Med
2022
35144655
Somatic mutational profiles and germline polygenic risk scores in human cancer.
Genome Med
2022
35804456
DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk.
Genome Biol
2022
35697866
Allelic imbalance of chromatin accessibility in cancer identifies candidate causal risk variants and their mechanisms.
Nat Genet
2022
35512711
Germline predisposition to pediatric Ewing sarcoma is characterized by inherited pathogenic variants in DNA damage repair genes.
Am J Hum Genet
2022
35931050
Multi-ancestry fine-mapping improves precision to identify causal genes in transcriptome-wide association studies.
Am J Hum Genet
2022
36171194
Multi-context genetic modeling of transcriptional regulation resolves novel disease loci.
Nat Commun
2022
36263809
The regulatory landscape of multiple brain regions in outbred heterogeneous stock rats.
Nucleic Acids Res
2022
35042540
Functional characterisation of the amyotrophic lateral sclerosis risk locus GPX3/TNIP1.
Genome Med
2022
34099491
Gene Fusions Create Partner and Collateral Dependencies Essential to Cancer Cell Survival.
Cancer Res
2021
33789101
Trans-ethnic variation in germline variants of patients with renal cell carcinoma.
Cell Rep
2021
34099491
Gene Fusions Create Partner and Collateral Dependencies Essential to Cancer Cell Survival.
Cancer Res
2021
33831007
Leveraging expression from multiple tissues using sparse canonical correlation analysis and aggregate tests improves the power of transcriptome-wide association studies.
PLoS Genet
2021
34822763
H3K27ac HiChIP in prostate cell lines identifies risk genes for prostate cancer susceptibility.
Am J Hum Genet
2021
34820595
Germline Testing Data Validate Inferences of Mutational Status for Variants Detected From Tumor-Only Sequencing.
JCO Precis Oncol
2021
34699744
Allele-specific epigenetic activity in prostate cancer and normal prostate tissue implicates prostate cancer risk mechanisms.
Am J Hum Genet
2021
34749793
Constructing germline research cohorts from the discarded reads of clinical tumor sequences.
Genome Med
2021
33789101
Trans-ethnic variation in germline variants of patients with renal cell carcinoma.
Cell Rep
2021
33831007
Leveraging expression from multiple tissues using sparse canonical correlation analysis and aggregate tests improves the power of transcriptome-wide association studies.
PLoS Genet
2021
34822763
H3K27ac HiChIP in prostate cell lines identifies risk genes for prostate cancer susceptibility.
Am J Hum Genet
2021
34820595
Germline Testing Data Validate Inferences of Mutational Status for Variants Detected From Tumor-Only Sequencing.
JCO Precis Oncol
2021
34699744
Allele-specific epigenetic activity in prostate cancer and normal prostate tissue implicates prostate cancer risk mechanisms.
Am J Hum Genet
2021
34749793
Constructing germline research cohorts from the discarded reads of clinical tumor sequences.
Genome Med
2021
31595288
Annotations capturing cell type-specific TF binding explain a large fraction of disease heritability.
Hum Mol Genet
2020
31595288
Annotations capturing cell type-specific TF binding explain a large fraction of disease heritability.
Hum Mol Genet
2020
32424349
Quantifying genetic effects on disease mediated by assayed gene expression levels.
Nat Genet
2020
32130895
Germline Features Associated with Immune Infiltration in Solid Tumors.
Cell Rep
2020
32004450
Allele-Specific QTL Fine Mapping with PLASMA.
Am J Hum Genet
2020
32398369
Secure large-scale genome-wide association studies using homomorphic encryption.
Proc Natl Acad Sci U S A
2020
32332753
Non-coding somatic mutations converge on the PAX8 pathway in ovarian cancer.
Nat Commun
2020
33257650
Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations.
Nat Commun
2020
32693805
Optimized homomorphic encryption solution for secure genome-wide association studies.
BMC Med Genomics
2020
32690948
Prostate cancer reactivates developmental epigenomic programs during metastatic progression.
Nat Genet
2020
1 - 50 of 150
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row(s) 1 - 30 of 30
Collaborators
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David Geffen School of Medicine, University of California los angeles
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Co-authored papers
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Massachusetts General Hospital
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9
Steven Gazal
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Co-authored papers
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Dana-Farber Cancer Institute
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Brigham and Women's Hospital and Harvard Medical School
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Icahn School of Medicine at Mount Sinai, NY Institute for Genomic Health
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Christopher A Haiman
University of Southern California
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5
Patrick F Sullivan
University of North Carolina at Chapel Hill
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Samuela Pollack
Harvard T.H. Chan School of Public Health
Co-authored papers
5
Connor Bell
Dana-Farber Cancer Institute
Co-authored papers
5
Simon A Gayther
Cedars-Sinai Medical Center
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5
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Co-authored papers
5
Eli A Stahl
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5
Stephan Ripke
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Wei Zheng
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