Author details

Full Name

Stephen Buratowski

Affiliation

Harvard Medical School

ORCID

Career Start Year

1988

Papers

143

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37745343	Uncoupling the TFIIH Core and Kinase Modules Leads To Misregulated RNA Polymerase II CTD Serine 5 Phosphorylation.	bioRxiv	2024
37609355	Single-molecule analysis of transcription activation: dynamics of SAGA co-activator recruitment.	bioRxiv	2023
34694912	Gds1 Interacts with NuA4 To Promote H4 Acetylation at Ribosomal Protein Genes.	Mol Cell Biol	2022
35944214	A set of Saccharomyces cerevisiae integration vectors for fluorescent dye labeling of proteins.	G3 (Bethesda)	2022
34384542	Single-molecule studies reveal branched pathways for activator-dependent assembly of RNA polymerase II pre-initiation complexes.	Mol Cell	2021
32483379	Identification of a potent and selective covalent Pin1 inhibitor.	Nat Chem Biol	2020
33293419	Dynamics of RNA polymerase II and elongation factor Spt4/5 recruitment during activator-dependent transcription.	Proc Natl Acad Sci U S A	2020
32358498	The Set1 N-terminal domain and Swd2 interact with RNA polymerase II CTD to recruit COMPASS.	Nat Commun	2020
30844430	In vitro assembly and proteomic analysis of RNA polymerase II complexes.	Methods	2019
31085683	Selective Kinase Inhibition Shows That Bur1 (Cdk9) Phosphorylates the Rpb1 Linker <i>In Vivo</i>.	Mol Cell Biol	2019
31104813	Identification of Three Sequence Motifs in the Transcription Termination Factor Sen1 that Mediate Direct Interactions with Nrd1.	Structure	2019
29504936	Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance.	Elife	2018
30249596	A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export.	EMBO Rep	2018
29982589	Rpd3L HDAC links H3K4me3 to transcriptional repression memory.	Nucleic Acids Res	2018
29656924	Cell-Cycle Modulation of Transcription Termination Factor Sen1.	Mol Cell	2018
28954229	Microprocessor Recruitment to Elongating RNA Polymerase II Is Required for Differential Expression of MicroRNAs.	Cell Rep	2017
28450734	Modulation of gene expression dynamics by co-transcriptional histone methylations.	Exp Mol Med	2017
29184145	Erratum: Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.	Nat Commun	2017
29129639	Determinants of Histone H3K4 Methylation Patterns.	Mol Cell	2017
29203645	Downstream promoter interactions of TFIID TAFs facilitate transcription reinitiation.	Genes Dev	2017
26799764	Direct Analysis of Phosphorylation Sites on the Rpb1 C-Terminal Domain of RNA Polymerase II.	Mol Cell	2016
27892458	Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.	Nat Commun	2016
27193677	Structural biology: Snapshots of transcription initiation.	Nature	2016
24613354	Feedback control of Set1 protein levels is important for proper H3K4 methylation patterns.	Cell Rep	2014
28915368	A Chromatin-Based Mechanism for Limiting Divergent Noncoding Transcription.	Cell	2014
24949978	A chromatin-based mechanism for limiting divergent noncoding transcription.	Cell	2014
23177741	Kinetic competition between RNA Polymerase II and Sen1-dependent transcription termination.	Mol Cell	2013
24035501	The C-terminal domain of Rpb1 functions on other RNA polymerase II subunits.	Mol Cell	2013
24196955	The RNA polymerase II C-terminal domain-interacting domain of yeast Nrd1 contributes to the choice of termination pathway and couples to RNA processing by the nuclear exosome.	J Biol Chem	2013
23536186	Regulation of primary response genes in B cells.	J Biol Chem	2013
23541037	Histone Crosstalk: H2Bub and H3K4 Methylation.	Mol Cell	2013
22431730	Yeast Swd2 is essential because of antagonism between Set1 histone methyltransferase complex and APT (associated with Pta1) termination factor.	J Biol Chem	2012
23174300	Transcription: base J blocks the way.	Curr Biol	2012
22959268	Set3 HDAC mediates effects of overlapping noncoding transcription on gene induction kinetics.	Cell	2012
22959267	Transcription of two long noncoding RNAs mediates mating-type control of gametogenesis in budding yeast.	Cell	2012
22807688	A key role for Chd1 in histone H3 dynamics at the 3' ends of long genes in yeast.	PLoS Genet	2012
22912562	Systematic dissection of roles for chromatin regulators in a yeast stress response.	PLoS Biol	2012
22902623	Proteomic analysis demonstrates activator- and chromatin-specific recruitment to promoters.	J Biol Chem	2012
22422261	Gene expression: transcription initiation unwrapped.	Nature	2012
21709022	H3K4 trimethylation by Set1 promotes efficient termination by the Nrd1-Nab3-Sen1 pathway.	Mol Cell Biol	2011
22055186	Sub1 and RPA associate with RNA polymerase II at different stages of transcription.	Mol Cell	2011
21826286	Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species.	Transcription	2011
21596317	The specificity and topology of chromatin interaction pathways in yeast.	Mol Cell	2011
20637075	RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast.	Genome Biol	2010
21447819	The role of cotranscriptional histone methylations.	Cold Spring Harb Symp Quant Biol	2010
20818393	Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.	Nat Struct Mol Biol	2010
20732871	Leo1 subunit of the yeast paf1 complex binds RNA and contributes to complex recruitment.	J Biol Chem	2010
19131970	Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II.	EMBO J	2009
19941815	Progression through the RNA polymerase II CTD cycle.	Mol Cell	2009
19679665	Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.	J Biol Chem	2009

1 - 50 of 143

Gonzalo Mill??n-Zambrano

Universidad de Sevilla-CSIC-Universidad Pablo de Olavide

Career Start Year 2011

Number of shared co-authors 3

Maria J Aristizabal

Queen's University

Career Start Year 2011

Number of shared co-authors 6

Huiyan Jin

Texas A&M University, College Station

Career Start Year 2011

Number of shared co-authors 6

Raghuvar Dronamraju

University of North Carolina at Chapel Hill School of Medicine

Career Start Year 2009

Number of shared co-authors 3

Ajay A Vashisht

David Geffen School of Medicine, University of California los angeles

Career Start Year 2005

Number of shared co-authors 3

Jie Luo

Institute for Systems Biology

Career Start Year 2004

Number of shared co-authors 2

Christopher C Ebmeier

University of Colorado

Career Start Year 2004

Number of shared co-authors 4

Xenia Pe??ate

Universidad de Sevilla

Career Start Year 2003

Number of shared co-authors 1

Sean E Hanlon

Drew University, National Institutes of Health, Rutgers University New Brunswick, University of North Carolina at Chapel Hill

Career Start Year 2003

Number of shared co-authors 1

Tiaojiang Xiao

National Institute of Diabetes and Digestive and Kidney Diseases

Career Start Year 2002

Number of shared co-authors 4

Tam??s Fischer

The Australian National University

Career Start Year 2000

Number of shared co-authors 3

Stephen Watt

Wellcome Sanger Institute

Career Start Year 1999

Number of shared co-authors 6

Fran??ois Robert

Institut de recherches cliniques de Montreal

Career Start Year 1996

Number of shared co-authors 8

Vishwanath R Iyer

Indian Institute of Technology Bombay

Career Start Year 1995

Number of shared co-authors 1

Colin Logie

Radboud Institute for Molecular Science, Radboud University

Career Start Year 1995

Number of shared co-authors 1

Zu-Wen Sun

EpiCypher Inc.

Career Start Year 1995

Number of shared co-authors 5

Torben Heick Jensen

Universitetsbyen 81, Aarhus University

Career Start Year 1995

Number of shared co-authors 1

David A Bushnell

Stanford University

Career Start Year 1994

Number of shared co-authors 3

Jeffrey A Ranish

Institute for Systems Biology

Career Start Year 1991

Number of shared co-authors 3

Sebasti??n Ch??vez

Universidad de Sevilla

Career Start Year 1991

Number of shared co-authors 5

Ralph E Davis

Stanford University School of Medicine

Career Start Year 1988

Number of shared co-authors 2

Hiten D Madhani

University of California san francisco

Career Start Year 1986

Number of shared co-authors 13

David T Auble

University of Virginia

Career Start Year 1986

Number of shared co-authors 1

Shelley L Berger

Penn Epigenetics Institute, Perelman School of Medicine

Career Start Year 1985

Number of shared co-authors 17

Monika Tsai-Pflugfelder

Friedrich Miescher Institute for Biomedical Research

Career Start Year 1984

Number of shared co-authors 2

James T Kadonaga

University of California

Career Start Year 1983

Number of shared co-authors 0

Danny Reinberg

HHMI/NYU Langone School of Medicine

Career Start Year 1980

Number of shared co-authors 9

Michael Shales

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Career Start Year 1980

Number of shared co-authors 37

Mary Ann Osley

University of New Mexico Health Sciences Center

Career Start Year 1974

Number of shared co-authors 5

Robert G Roeder

the Rockefeller University

Career Start Year 1969

Number of shared co-authors 8

row(s) 1 - 30 of 30

Minkyu Kim

University of California san francisco

Co-authored papers 15

Jack F Greenblatt

College Street, University of Toronto

Co-authored papers 14

Michael-Christopher Keogh

EpiCypher Inc.

Co-authored papers 13

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 11

Oliver J Rando

University of Massachusetts Chan Medical School

Co-authored papers 9

Andrew Emili

Boston University School of Medicine, Boston University

Co-authored papers 7

Steven Hahn

Fred Hutchinson Cancer Center

Co-authored papers 6

Lidia Vasiljeva

University of Oxford

Co-authored papers 6

Vladimir Podolny

Harvard Medical School

Co-authored papers 6

Seong Hoon Ahn

College of Science and Convergence Technology, Hanyang University

Co-authored papers 5

Chika Sawa

Showa University School of Medicine

Co-authored papers 5

Timothy R Hughes

University of Toronto

Co-authored papers 4

Nira Datta

Co-authored papers 4

Lars M Steinmetz

Stanford University

Co-authored papers 4

Nir Friedman

Co-authored papers 4

Jeff Pootoolal

Antimicrobial Research Centre, McMaster University

Co-authored papers 3

Eduard Nedea

University of Toronto

Co-authored papers 3

Gerard Cagney

Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin

Co-authored papers 3

Veronica Canadien

Hospital for Sick Children

Co-authored papers 3

Michael S Kobor

University of British Columbia

Co-authored papers 3

Tadashi Wada

Osaka University

Co-authored papers 2

Amy Hin Yan Tong

University of Toronto

Co-authored papers 2

Hiroshi Handa

Center for Future Medical Research, Tokyo Medical University

Co-authored papers 2

Ali Shilatifard

Northwestern University Feinberg School of Medicine

Co-authored papers 2

Steven P Gygi

Harvard Medical School

Co-authored papers 2

Jesper Q Svejstrup

Panum Institute, University of Copenhagen

Co-authored papers 2

Judy Lieberman

Boston Children's Hospital

Co-authored papers 2

Nam Pho

Co-authored papers 2

Dipanjan Chowdhury

Dana-Farber Cancer Institute

Co-authored papers 2

Charles Boone

University of Toronto

Co-authored papers 2

1 - 30

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