Author details

Full Name

Penny Coggill

Affiliation

ORCID

Career Start Year

2000

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
26673716	The Pfam protein families database: towards a more sustainable future.	Nucleic Acids Res	2016
25614388	The complexity, challenges and benefits of comparing two transporter classification systems in TCDB and Pfam.	Brief Bioinform	2015
25044324	Crystal structures of three representatives of a new Pfam family PF14869 (DUF4488) suggest they function in sugar binding/uptake.	Protein Sci	2014
24383880	New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily.	BMC Bioinformatics	2014
24288371	Pfam: the protein families database.	Nucleic Acids Res	2014
24646163	Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis.	BMC Bioinformatics	2014
23589541	Sequencing and comparative analysis of the gorilla MHC genomic sequence.	Database (Oxford)	2013
24274019	LUD, a new protein domain associated with lactate utilization.	BMC Bioinformatics	2013
24004689	Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila.	BMC Bioinformatics	2013
23603847	The challenge of increasing Pfam coverage of the human proteome.	Database (Oxford)	2013
22096229	InterPro in 2011: new developments in the family and domain prediction database.	Nucleic Acids Res	2012
22615736	The YARHG domain: an extracellular domain in search of a function.	PLoS One	2012
22127870	The Pfam protein families database.	Nucleic Acids Res	2012
21854592	The tammar wallaby major histocompatibility complex shows evidence of past genomic instability.	BMC Genomics	2011
19920124	The Pfam protein families database.	Nucleic Acids Res	2010
20944204	DUFs: families in search of function.	Acta Crystallogr Sect F Struct Biol Cryst Commun	2010
21564646	Isolation and characterization of 10 MHC Class I-associated microsatellite loci in tammar wallaby (Macropus eugenii).	Mol Ecol Resour	2009
19602235	MHC-linked and un-linked class I genes in the wallaby.	BMC Genomics	2009
19325871	A common variant associated with dyslexia reduces expression of the KIAA0319 gene.	PLoS Genet	2009
19834558	A novel system of polymorphic and diverse NK cell receptors in primates.	PLoS Genet	2009
20017931	The structure of pyogenecin immunity protein, a novel bacteriocin-like immunity protein from Streptococcus pyogenes.	BMC Struct Biol	2009
18819075	Identifying protein domains with the Pfam database.	Curr Protoc Bioinformatics	2008
18039703	The Pfam protein families database.	Nucleic Acids Res	2008
18513384	Generation of a genomic tiling array of the human major histocompatibility complex (MHC) and its application for DNA methylation analysis.	BMC Med Genomics	2008
18193213	Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project.	Immunogenetics	2008
17540169	Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia.	Cell	2007
17081307	Evolution and comparative analysis of the MHC Class III inflammatory region.	BMC Genomics	2006
16515853	The genomic sequence and analysis of the swine major histocompatibility complex.	Genomics	2006
16699593	The leukocyte receptor complex in chicken is characterized by massive expansion and diversification of immunoglobulin-like Loci.	PLoS Genet	2006
16911775	Identification of the ancestral killer immunoglobulin-like receptor gene in primates.	BMC Genomics	2006
16738944	Identification of a single killer immunoglobulin-like receptor (KIR) gene in the porcine leukocyte receptor complex on chromosome 6q.	Immunogenetics	2006
16440057	Genetic analysis of completely sequenced disease-associated MHC haplotypes identifies shuffling of segments in recent human history.	PLoS Genet	2006
17092261	The LRC haplotype project: a resource for killer immunoglobulin-like receptor-linked association studies.	Tissue Antigens	2006
16103651	Analysis of the genomic region containing the tammar wallaby (Macropus eugenii) orthologues of MHC class III genes.	Cytogenet Genome Res	2005
15140828	Complete MHC haplotype sequencing for common disease gene mapping.	Genome Res	2004
11237013	A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms.	Nature	2001
11029003	An SNP map of human chromosome 22.	Nature	2000